René's URL Explorer Experiment


Title: Ribbon

direct link

Domain: splitthreader.com

NoneIE=edge

Links:

Ribbonhttps://splitthreader.com/
My Ribbon data https://splitthreader.com
learn morehttps://github.com/MariaNattestad/Ribbon/blob/main/docs/release_notes_v2.md
back to v1https://v1.genomeribbon.com
Exampleshttps://splitthreader.com#examples_panel
Ribbonhttps://splitthreader.com#ribbon-app-container
SplitThreaderhttps://splitthreader.com#splitthreader-app-container
Abouthttps://splitthreader.com#start_panel
https://v2.genomeribbon.com/?session=https://42basepairs.com/download/s3/giab-data/ribbon-json/ribbon-hg008-cov-bedpe.json&locus=chr1:23272628#splitthreader https://v2.genomeribbon.com/?session=https://42basepairs.com/download/s3/giab-data/ribbon-json/ribbon-hg008-cov-bedpe.json&locus=chr1:23272628#splitthreader
Illumina deletion in A549 cell line (600KB)https://splitthreader.com?perma=_ribbon/ilmn_deletion_a549
hg19 against GRCh38 (2 MB)https://splitthreader.com?perma=_ribbon/grch38_vs_hg19
PacBio SKBR3 TRA chr16 to chr19 (5MB)https://splitthreader.com?perma=_ribbon/pacb_skbr3_tra
PacBio SKBR3 CYTH1-EIF3H gene fusion (11MB)https://splitthreader.com?perma=_ribbon/pacb_skbr3_gene_fusion
Gorilla against GRCh38 (12MB)https://splitthreader.com?perma=_ribbon/grch38_vs_gorilla
https://doi.org/10.1093/bioinformatics/btaa680https://doi.org/10.1093/bioinformatics/btaa680
Ribbon.http://biorxiv.org/content/early/2016/10/20/082123
SplitThreaderhttps://www.biorxiv.org/content/10.1101/087981v1.full
https://github.com/MariaNattestad/Ribbonhttps://github.com/MariaNattestad/ribbon
https://github.com/MariaNattestad/Ribbonhttps://github.com/MariaNattestad/ribbon
Illumina deletion in A549 cell line (600KB)https://splitthreader.com?perma=_ribbon/ilmn_deletion_a549
hg19 against GRCh38 (2 MB)https://splitthreader.com?perma=_ribbon/grch38_vs_hg19
PacBio SKBR3 TRA chr16 to chr19 (5MB)https://splitthreader.com?perma=_ribbon/pacb_skbr3_tra
PacBio SKBR3 CYTH1-EIF3H gene fusion (11MB)https://splitthreader.com?perma=_ribbon/pacb_skbr3_gene_fusion
Gorilla against GRCh38 (12MB)https://splitthreader.com?perma=_ribbon/grch38_vs_gorilla
Input alignmentshttps://splitthreader.com#tab_input_alignments
Informationhttps://splitthreader.com#tab_data_description
Multi-read settingshttps://splitthreader.com#tab_region_settings
Single-read settingshttps://splitthreader.com#tab_settings
Large variantshttps://splitthreader.com#tab_bedpe_table_panel
Small variantshttps://splitthreader.com#tab_variant_input_panel
Featureshttps://splitthreader.com#tab_feature_input_panel
Automationhttps://splitthreader.com#tab_automation
BAM from URL (recommended)https://splitthreader.com#url_bam
Local BAMhttps://splitthreader.com#bam
MUMmer coordinateshttps://splitthreader.com#coords
Setuphttps://splitthreader.com#setup_tab
Visualizerhttps://splitthreader.com#visualizer_tab
Variant analysishttps://splitthreader.com#variant_analysis_tab
Gene fusionshttps://splitthreader.com#gene_fusions_tab
Graph searchhttps://splitthreader.com#feature_search_tab
Github issuehttps://github.com/MariaNattestad/Ribbon/issues
convert_to_splitthreader_formathttps://github.com/MariaNattestad/Ribbon/blob/main/js/vcf_utils.js#L37
Toolshttps://splitthreader.com#settings_panel
Geneshttps://splitthreader.com#gene_settings
Variantshttps://splitthreader.com#variant_settings
Explorehttps://splitthreader.com#explore_tab
Settingshttps://splitthreader.com#settings_splitthreader

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URLs of crawlers that visited me.