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Title: Basic Command Usage | Singularity

Description: Basic Command Usage These docs are for Singularity Version 2.5.2. For older versions, see our archive The Singularity commandSingularity uses a primary command wrapper called singularity. When you run singularity without any options or arguments it will dump the high level usage syntax.The general usage form is:$ singularity (opts1) [subcommand] (opts2) ...If you type singularity without any arguments, you will see a high level help for all arguments. The main options include:Container Actions build: Build a container on your user endpoint or build environment exec: Execute a command to your container inspect: See labels, run and test scripts, and environment variables pull: pull an image from Docker or Singularity Hub run: Run your image as an executable shell: Shell into your imageImage Commands image.import: import layers or other file content to your image image.export: export the contents of the image to tar or stream image.create: create a new image, using the old ext3 filesystem image.expand: increase the size of your image (old ext3)Instance CommandsInstances were added in 2.4. This list is brief, and likely to expand with further development. instances: Start, stop, and list container instancesDeprecated CommandsThe following commands are deprecated in 2.4 and will be removed in future releases. bootstrap: Bootstrap a container recipeFor the full usage, see the bottom of this pageOptions and argument processingBecause of the nature of how Singularity cascades commands and sub-commands, argument processing is done with a mandatory order. This means that where you place arguments is important! In the above usage example, opts1 are the global Singularity run-time options. These options are always applicable no matter what subcommand you select (e.g. --verbose or --debug). But subcommand specific options must be passed after the relevant subcommand.To further clarify this example, the exec Singularity subcommand will execute a program within the container and pass the arguments passed to the program. So to mitigate any argument clashes, Singularity must not interpret or interfere with any of the command arguments or options that are not relevant for that particular function.Singularity HelpSingularity comes with some internal documentation by using the help subcommand followed by the subcommand you want more information about. For example:$ singularity help createCREATE OPTIONS: -s/--size Specify a size for an operation in MiB, i.e. 1024*1024B (default 768MiB) -F/--force Overwrite an image file if it existsEXAMPLES: $ singularity create /tmp/Debian.img $ singularity create -s 4096 /tmp/Debian.imgFor additional help, please visit our public documentation pages which arefound at: http://singularity.lbl.gov/Commands UsageUSAGE: singularity [global options...] [command options...] ...GLOBAL OPTIONS: -d|--debug Print debugging information -h|--help Display usage summary -s|--silent Only print errors -q|--quiet Suppress all normal output --version Show application version -v|--verbose Increase verbosity +1 -x|--sh-debug Print shell wrapper debugging informationGENERAL COMMANDS: help Show additional help for a command or container selftest Run some self tests for singularity install CONTAINER USAGE COMMANDS: exec Execute a command within container run Launch a runscript within container shell Run a Bourne shell within container test Launch a testscript within container CONTAINER MANAGEMENT COMMANDS: apps List available apps within a container bootstrap *Deprecated* use build instead build Build a new Singularity container check Perform container lint checks inspect Display a container's metadata mount Mount a Singularity container image pull Pull a Singularity/Docker container to $PWD COMMAND GROUPS: image Container image command group instance Persistent instance command group CONTAINER USAGE OPTIONS: see singularity help For any additional help or support visit the Singularitywebsite: http://singularity.lbl.gov/SupportHave a question, or need further information? Reach out to us. Previous Next Site last generated: Feb 15, 2022

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