René's URL Explorer Experiment


Title: GitHub - xryanglab/RiboCode: release version

Open Graph Title: GitHub - xryanglab/RiboCode: release version

X Title: GitHub - xryanglab/RiboCode: release version

Description: release version. Contribute to xryanglab/RiboCode development by creating an account on GitHub.

Open Graph Description: release version. Contribute to xryanglab/RiboCode development by creating an account on GitHub.

X Description: release version. Contribute to xryanglab/RiboCode development by creating an account on GitHub.

Opengraph URL: https://github.com/xryanglab/RiboCode

X: @github

direct link

Domain: patch-diff.githubusercontent.com

route-pattern/:user_id/:repository
route-controllerfiles
route-actiondisambiguate
fetch-noncev2:b5ff0d4c-1161-b80f-52a8-da78bd1b37d2
current-catalog-service-hashf3abb0cc802f3d7b95fc8762b94bdcb13bf39634c40c357301c4aa1d67a256fb
request-idB296:1D83:5657EE7:7629491:698D0475
html-safe-noncef132ee100325a3acbfecebe500c2bfb53a1da6aa3eeac3f0b3759a4561d185ee
visitor-payloadeyJyZWZlcnJlciI6IiIsInJlcXVlc3RfaWQiOiJCMjk2OjFEODM6NTY1N0VFNzo3NjI5NDkxOjY5OEQwNDc1IiwidmlzaXRvcl9pZCI6IjYwMjkyMjIyMjk0MzgxNzAyMjkiLCJyZWdpb25fZWRnZSI6ImlhZCIsInJlZ2lvbl9yZW5kZXIiOiJpYWQifQ==
visitor-hmacadf3c978701573a20ad0c0ac303cbbd6ddb294ef2c9d77608482e82a687c1b61
hovercard-subject-tagrepository:84300831
github-keyboard-shortcutsrepository,copilot
google-site-verificationApib7-x98H0j5cPqHWwSMm6dNU4GmODRoqxLiDzdx9I
octolytics-urlhttps://collector.github.com/github/collect
analytics-location//
fb:app_id1401488693436528
apple-itunes-appapp-id=1477376905, app-argument=https://github.com/xryanglab/RiboCode
twitter:imagehttps://opengraph.githubassets.com/29510bbf0bd856ad1dc8fa3d9d9de6a17b0395cd68cac3c77cc3023a64449ab2/xryanglab/RiboCode
twitter:cardsummary_large_image
og:imagehttps://opengraph.githubassets.com/29510bbf0bd856ad1dc8fa3d9d9de6a17b0395cd68cac3c77cc3023a64449ab2/xryanglab/RiboCode
og:image:altrelease version. Contribute to xryanglab/RiboCode development by creating an account on GitHub.
og:image:width1200
og:image:height600
og:site_nameGitHub
og:typeobject
hostnamegithub.com
expected-hostnamegithub.com
Nonef2da95634bce8a94cfa4123788169bfabdf845fd1d790fbaaaaab09dcfebdf28
turbo-cache-controlno-preview
go-importgithub.com/xryanglab/RiboCode git https://github.com/xryanglab/RiboCode.git
octolytics-dimension-user_id13201188
octolytics-dimension-user_loginxryanglab
octolytics-dimension-repository_id84300831
octolytics-dimension-repository_nwoxryanglab/RiboCode
octolytics-dimension-repository_publictrue
octolytics-dimension-repository_is_forkfalse
octolytics-dimension-repository_network_root_id84300831
octolytics-dimension-repository_network_root_nwoxryanglab/RiboCode
turbo-body-classeslogged-out env-production page-responsive
disable-turbofalse
browser-stats-urlhttps://api.github.com/_private/browser/stats
browser-errors-urlhttps://api.github.com/_private/browser/errors
releasec21843b18feba17d11efb1895a7db61e8672f2cf
ui-targetfull
theme-color#1e2327
color-schemelight dark

Links:

Skip to contenthttps://patch-diff.githubusercontent.com/xryanglab/RiboCode#start-of-content
https://patch-diff.githubusercontent.com/
Sign in https://patch-diff.githubusercontent.com/login?return_to=https%3A%2F%2Fgithub.com%2Fxryanglab%2FRiboCode
GitHub CopilotWrite better code with AIhttps://github.com/features/copilot
GitHub SparkBuild and deploy intelligent appshttps://github.com/features/spark
GitHub ModelsManage and compare promptshttps://github.com/features/models
MCP RegistryNewIntegrate external toolshttps://github.com/mcp
ActionsAutomate any workflowhttps://github.com/features/actions
CodespacesInstant dev environmentshttps://github.com/features/codespaces
IssuesPlan and track workhttps://github.com/features/issues
Code ReviewManage code changeshttps://github.com/features/code-review
GitHub Advanced SecurityFind and fix vulnerabilitieshttps://github.com/security/advanced-security
Code securitySecure your code as you buildhttps://github.com/security/advanced-security/code-security
Secret protectionStop leaks before they starthttps://github.com/security/advanced-security/secret-protection
Why GitHubhttps://github.com/why-github
Documentationhttps://docs.github.com
Bloghttps://github.blog
Changeloghttps://github.blog/changelog
Marketplacehttps://github.com/marketplace
View all featureshttps://github.com/features
Enterpriseshttps://github.com/enterprise
Small and medium teamshttps://github.com/team
Startupshttps://github.com/enterprise/startups
Nonprofitshttps://github.com/solutions/industry/nonprofits
App Modernizationhttps://github.com/solutions/use-case/app-modernization
DevSecOpshttps://github.com/solutions/use-case/devsecops
DevOpshttps://github.com/solutions/use-case/devops
CI/CDhttps://github.com/solutions/use-case/ci-cd
View all use caseshttps://github.com/solutions/use-case
Healthcarehttps://github.com/solutions/industry/healthcare
Financial serviceshttps://github.com/solutions/industry/financial-services
Manufacturinghttps://github.com/solutions/industry/manufacturing
Governmenthttps://github.com/solutions/industry/government
View all industrieshttps://github.com/solutions/industry
View all solutionshttps://github.com/solutions
AIhttps://github.com/resources/articles?topic=ai
Software Developmenthttps://github.com/resources/articles?topic=software-development
DevOpshttps://github.com/resources/articles?topic=devops
Securityhttps://github.com/resources/articles?topic=security
View all topicshttps://github.com/resources/articles
Customer storieshttps://github.com/customer-stories
Events & webinarshttps://github.com/resources/events
Ebooks & reportshttps://github.com/resources/whitepapers
Business insightshttps://github.com/solutions/executive-insights
GitHub Skillshttps://skills.github.com
Documentationhttps://docs.github.com
Customer supporthttps://support.github.com
Community forumhttps://github.com/orgs/community/discussions
Trust centerhttps://github.com/trust-center
Partnershttps://github.com/partners
GitHub SponsorsFund open source developershttps://github.com/sponsors
Security Labhttps://securitylab.github.com
Maintainer Communityhttps://maintainers.github.com
Acceleratorhttps://github.com/accelerator
Archive Programhttps://archiveprogram.github.com
Topicshttps://github.com/topics
Trendinghttps://github.com/trending
Collectionshttps://github.com/collections
Enterprise platformAI-powered developer platformhttps://github.com/enterprise
GitHub Advanced SecurityEnterprise-grade security featureshttps://github.com/security/advanced-security
Copilot for BusinessEnterprise-grade AI featureshttps://github.com/features/copilot/copilot-business
Premium SupportEnterprise-grade 24/7 supporthttps://github.com/premium-support
Pricinghttps://github.com/pricing
Search syntax tipshttps://docs.github.com/search-github/github-code-search/understanding-github-code-search-syntax
documentationhttps://docs.github.com/search-github/github-code-search/understanding-github-code-search-syntax
Sign in https://patch-diff.githubusercontent.com/login?return_to=https%3A%2F%2Fgithub.com%2Fxryanglab%2FRiboCode
Sign up https://patch-diff.githubusercontent.com/signup?ref_cta=Sign+up&ref_loc=header+logged+out&ref_page=%2F%3Cuser-name%3E%2F%3Crepo-name%3E&source=header-repo&source_repo=xryanglab%2FRiboCode
Reloadhttps://patch-diff.githubusercontent.com/xryanglab/RiboCode
Reloadhttps://patch-diff.githubusercontent.com/xryanglab/RiboCode
Reloadhttps://patch-diff.githubusercontent.com/xryanglab/RiboCode
xryanglab https://patch-diff.githubusercontent.com/xryanglab
RiboCodehttps://patch-diff.githubusercontent.com/xryanglab/RiboCode
Notifications https://patch-diff.githubusercontent.com/login?return_to=%2Fxryanglab%2FRiboCode
Fork 16 https://patch-diff.githubusercontent.com/login?return_to=%2Fxryanglab%2FRiboCode
Star 58 https://patch-diff.githubusercontent.com/login?return_to=%2Fxryanglab%2FRiboCode
MIT license https://patch-diff.githubusercontent.com/xryanglab/RiboCode/blob/master/LICENSE
58 stars https://patch-diff.githubusercontent.com/xryanglab/RiboCode/stargazers
16 forks https://patch-diff.githubusercontent.com/xryanglab/RiboCode/forks
Branches https://patch-diff.githubusercontent.com/xryanglab/RiboCode/branches
Tags https://patch-diff.githubusercontent.com/xryanglab/RiboCode/tags
Activity https://patch-diff.githubusercontent.com/xryanglab/RiboCode/activity
Star https://patch-diff.githubusercontent.com/login?return_to=%2Fxryanglab%2FRiboCode
Notifications https://patch-diff.githubusercontent.com/login?return_to=%2Fxryanglab%2FRiboCode
Code https://patch-diff.githubusercontent.com/xryanglab/RiboCode
Issues 37 https://patch-diff.githubusercontent.com/xryanglab/RiboCode/issues
Pull requests 0 https://patch-diff.githubusercontent.com/xryanglab/RiboCode/pulls
Actions https://patch-diff.githubusercontent.com/xryanglab/RiboCode/actions
Projects 0 https://patch-diff.githubusercontent.com/xryanglab/RiboCode/projects
Security 0 https://patch-diff.githubusercontent.com/xryanglab/RiboCode/security
Insights https://patch-diff.githubusercontent.com/xryanglab/RiboCode/pulse
Code https://patch-diff.githubusercontent.com/xryanglab/RiboCode
Issues https://patch-diff.githubusercontent.com/xryanglab/RiboCode/issues
Pull requests https://patch-diff.githubusercontent.com/xryanglab/RiboCode/pulls
Actions https://patch-diff.githubusercontent.com/xryanglab/RiboCode/actions
Projects https://patch-diff.githubusercontent.com/xryanglab/RiboCode/projects
Security https://patch-diff.githubusercontent.com/xryanglab/RiboCode/security
Insights https://patch-diff.githubusercontent.com/xryanglab/RiboCode/pulse
Brancheshttps://patch-diff.githubusercontent.com/xryanglab/RiboCode/branches
Tagshttps://patch-diff.githubusercontent.com/xryanglab/RiboCode/tags
https://patch-diff.githubusercontent.com/xryanglab/RiboCode/branches
https://patch-diff.githubusercontent.com/xryanglab/RiboCode/tags
172 Commitshttps://patch-diff.githubusercontent.com/xryanglab/RiboCode/commits/master/
https://patch-diff.githubusercontent.com/xryanglab/RiboCode/commits/master/
.circlecihttps://patch-diff.githubusercontent.com/xryanglab/RiboCode/tree/master/.circleci
.circlecihttps://patch-diff.githubusercontent.com/xryanglab/RiboCode/tree/master/.circleci
RiboCodehttps://patch-diff.githubusercontent.com/xryanglab/RiboCode/tree/master/RiboCode
RiboCodehttps://patch-diff.githubusercontent.com/xryanglab/RiboCode/tree/master/RiboCode
datahttps://patch-diff.githubusercontent.com/xryanglab/RiboCode/tree/master/data
datahttps://patch-diff.githubusercontent.com/xryanglab/RiboCode/tree/master/data
.gitignorehttps://patch-diff.githubusercontent.com/xryanglab/RiboCode/blob/master/.gitignore
.gitignorehttps://patch-diff.githubusercontent.com/xryanglab/RiboCode/blob/master/.gitignore
AUTHORShttps://patch-diff.githubusercontent.com/xryanglab/RiboCode/blob/master/AUTHORS
AUTHORShttps://patch-diff.githubusercontent.com/xryanglab/RiboCode/blob/master/AUTHORS
ChangeLog.rsthttps://patch-diff.githubusercontent.com/xryanglab/RiboCode/blob/master/ChangeLog.rst
ChangeLog.rsthttps://patch-diff.githubusercontent.com/xryanglab/RiboCode/blob/master/ChangeLog.rst
LICENSEhttps://patch-diff.githubusercontent.com/xryanglab/RiboCode/blob/master/LICENSE
LICENSEhttps://patch-diff.githubusercontent.com/xryanglab/RiboCode/blob/master/LICENSE
MANIFEST.inhttps://patch-diff.githubusercontent.com/xryanglab/RiboCode/blob/master/MANIFEST.in
MANIFEST.inhttps://patch-diff.githubusercontent.com/xryanglab/RiboCode/blob/master/MANIFEST.in
README.rsthttps://patch-diff.githubusercontent.com/xryanglab/RiboCode/blob/master/README.rst
README.rsthttps://patch-diff.githubusercontent.com/xryanglab/RiboCode/blob/master/README.rst
setup.cfghttps://patch-diff.githubusercontent.com/xryanglab/RiboCode/blob/master/setup.cfg
setup.cfghttps://patch-diff.githubusercontent.com/xryanglab/RiboCode/blob/master/setup.cfg
setup.pyhttps://patch-diff.githubusercontent.com/xryanglab/RiboCode/blob/master/setup.py
setup.pyhttps://patch-diff.githubusercontent.com/xryanglab/RiboCode/blob/master/setup.py
READMEhttps://patch-diff.githubusercontent.com/xryanglab/RiboCode
MIT licensehttps://patch-diff.githubusercontent.com/xryanglab/RiboCode
https://patch-diff.githubusercontent.com/xryanglab/RiboCode#detect-translated-orfs-using-ribosome-profiling-data
https://circleci.com/gh/xryanglab/RiboCode
https://pypi.python.org/pypi/RiboCode
https://pypi.python.org/pypi/RiboCode
http://bioconda.github.io/recipes/ribocode/README.html
https://doi.org/10.1093/nar/gky179
https://dx.doi.org/10.3791/63366
https://anaconda.org/bioconda/ribocode
https://patch-diff.githubusercontent.com/xryanglab/RiboCode#dependencies
https://patch-diff.githubusercontent.com/xryanglab/RiboCode#installation
https://patch-diff.githubusercontent.com/xryanglab/RiboCode#tutorial-to-analyze-ribosome-profiling-data-and-run-ribocode
HEK293 datasethttps://trace.ncbi.nlm.nih.gov/Traces/sra/?run=SRR1630831
http://www.gencodegenes.orghttp://www.gencodegenes.org
http://asia.ensembl.org/info/data/ftp/index.htmlhttp://asia.ensembl.org/info/data/ftp/index.html
http://useast.ensembl.org/info/data/ftp/index.htmlhttp://useast.ensembl.org/info/data/ftp/index.html
https://github.com/xryanglab/RiboCode/blob/master/data/GTF_update.rst
GTF_update.rsthttps://github.com/xryanglab/RiboCode/blob/master/data/GTF_update.rst
SRA_Toolkithttps://trace.ncbi.nlm.nih.gov/Traces/sra/sra.cgi?view=software
https://cutadapt.readthedocs.io/en/stable/installation.htmlhttps://cutadapt.readthedocs.io/en/stable/installation.html
Bowtiehttp://bowtie-bio.sourceforge.net/index.shtml
rRNA.fahttps://github.com/xryanglab/RiboCode/blob/master/data/rRNA.fa
https://github.com/alexdobin/STARhttps://github.com/alexdobin/STAR
https://github.com/xryanglab/RiboCode/blob/master/data/GTF_update.rst
config.txthttps://github.com/xryanglab/RiboCode/blob/master/data/config.txt
RiboCodehttps://patch-diff.githubusercontent.com/xryanglab/RiboCode#ribocode
STARhttps://patch-diff.githubusercontent.com/xryanglab/RiboCode#star
https://patch-diff.githubusercontent.com/xryanglab/RiboCode#recipes-faq
UNC Bioinformatics Utilitieshttps://github.com/mozack/ubu
config.txthttps://github.com/xryanglab/RiboCode/blob/master/data/config.txt
http://matplotlib.org/faq/usage_faq.html#what-is-a-backendhttp://matplotlib.org/faq/usage_faq.html#what-is-a-backend
http://matplotlib.org/users/customizing.html#the-matplotlibrc-filehttp://matplotlib.org/users/customizing.html#the-matplotlibrc-file
http://stackoverflow.com/questions/2801882/generating-a-png-with-matplotlib-when-display-is-undefinedhttp://stackoverflow.com/questions/2801882/generating-a-png-with-matplotlib-when-display-is-undefined
https://patch-diff.githubusercontent.com/xryanglab/RiboCode#for-any-questions-please-contact
bioinformatics https://patch-diff.githubusercontent.com/topics/bioinformatics
orfs https://patch-diff.githubusercontent.com/topics/orfs
ribosome-profiling https://patch-diff.githubusercontent.com/topics/ribosome-profiling
peptides https://patch-diff.githubusercontent.com/topics/peptides
Readme https://patch-diff.githubusercontent.com/xryanglab/RiboCode#readme-ov-file
MIT license https://patch-diff.githubusercontent.com/xryanglab/RiboCode#MIT-1-ov-file
Please reload this pagehttps://patch-diff.githubusercontent.com/xryanglab/RiboCode
Activityhttps://patch-diff.githubusercontent.com/xryanglab/RiboCode/activity
Custom propertieshttps://patch-diff.githubusercontent.com/xryanglab/RiboCode/custom-properties
58 starshttps://patch-diff.githubusercontent.com/xryanglab/RiboCode/stargazers
3 watchinghttps://patch-diff.githubusercontent.com/xryanglab/RiboCode/watchers
16 forkshttps://patch-diff.githubusercontent.com/xryanglab/RiboCode/forks
Report repository https://patch-diff.githubusercontent.com/contact/report-content?content_url=https%3A%2F%2Fgithub.com%2Fxryanglab%2FRiboCode&report=xryanglab+%28user%29
Releases 6https://patch-diff.githubusercontent.com/xryanglab/RiboCode/releases
Version 1.2.13 Latest Dec 28, 2021 https://patch-diff.githubusercontent.com/xryanglab/RiboCode/releases/tag/v1.2.13
+ 5 releaseshttps://patch-diff.githubusercontent.com/xryanglab/RiboCode/releases
Packages 0https://patch-diff.githubusercontent.com/orgs/xryanglab/packages?repo_name=RiboCode
Please reload this pagehttps://patch-diff.githubusercontent.com/xryanglab/RiboCode
Contributors 2https://patch-diff.githubusercontent.com/xryanglab/RiboCode/graphs/contributors
https://github.com/zhengtaoxiao
zhengtaoxiao Zhengtao xiao https://github.com/zhengtaoxiao
https://github.com/YangLabProject
YangLabProject https://github.com/YangLabProject
Python 99.4% https://patch-diff.githubusercontent.com/xryanglab/RiboCode/search?l=python
Shell 0.6% https://patch-diff.githubusercontent.com/xryanglab/RiboCode/search?l=shell
https://github.com
Termshttps://docs.github.com/site-policy/github-terms/github-terms-of-service
Privacyhttps://docs.github.com/site-policy/privacy-policies/github-privacy-statement
Securityhttps://github.com/security
Statushttps://www.githubstatus.com/
Communityhttps://github.community/
Docshttps://docs.github.com/
Contacthttps://support.github.com?tags=dotcom-footer

Viewport: width=device-width


URLs of crawlers that visited me.