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Title: GitHub - williamdale/ca_source_extraction: Matlab implementation of a source extraction and spike inference algorithm for large scale calcium imaging data analysis, based on a constrained matrix factorization approach.

Open Graph Title: GitHub - williamdale/ca_source_extraction: Matlab implementation of a source extraction and spike inference algorithm for large scale calcium imaging data analysis, based on a constrained matrix factorization approach.

X Title: GitHub - williamdale/ca_source_extraction: Matlab implementation of a source extraction and spike inference algorithm for large scale calcium imaging data analysis, based on a constrained matrix factorization approach.

Description: Matlab implementation of a source extraction and spike inference algorithm for large scale calcium imaging data analysis, based on a constrained matrix factorization approach. - williamdale/ca_source_extraction

Open Graph Description: Matlab implementation of a source extraction and spike inference algorithm for large scale calcium imaging data analysis, based on a constrained matrix factorization approach. - williamdale/ca_sour...

X Description: Matlab implementation of a source extraction and spike inference algorithm for large scale calcium imaging data analysis, based on a constrained matrix factorization approach. - williamdale/ca_sour...

Opengraph URL: https://github.com/williamdale/ca_source_extraction

X: @github

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https://patch-diff.githubusercontent.com/williamdale/ca_source_extraction#deconvolution-and-demixing-of-calcium-imaging-data
https://gitter.im/epnev/ca_source_extraction?utm_source=badge&utm_medium=badge&utm_campaign=pr-badge&utm_content=badge
http://dx.doi.org/10.1016/j.neuron.2015.11.037http://dx.doi.org/10.1016/j.neuron.2015.11.037
http://arxiv.org/abs/1409.2903http://arxiv.org/abs/1409.2903
https://patch-diff.githubusercontent.com/williamdale/ca_source_extraction#code-description-and-related-packages
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Constrained deconvolution and source extraction with CNMF (this package)https://github.com/epnev/ca_source_extraction
MCMC spike inferencehttps://github.com/epnev/continuous_time_ca_sampler
Group LASSO initialization and spatial CNMFhttps://github.com/danielso/ROI_detect
https://patch-diff.githubusercontent.com/williamdale/ca_source_extraction#python
Constrained deconvolution for neural activity (spike) extractionhttps://github.com/epnev/constrained_foopsi_python
Source extraction with CNMFhttps://github.com/agiovann/Constrained_NMF
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https://patch-diff.githubusercontent.com/williamdale/ca_source_extraction#integration-with-other-libraries
SIMAhttp://www.losonczylab.org/sima/1.3/
constrained deconvolutionhttps://github.com/losonczylab/sima/blob/master/sima/spikes.py
Thunderhttp://thunder-project.org/
group LASSO initialization and spatial CNMFhttps://github.com/j-friedrich/thunder/tree/LocalNMF
https://patch-diff.githubusercontent.com/williamdale/ca_source_extraction#usage-and-documentation
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http://cvxr.com/cvx/download/http://cvxr.com/cvx/download/
https://github.com/mpf/spgl1https://github.com/mpf/spgl1
https://github.com/epnev/continuous_time_ca_samplerhttps://github.com/epnev/continuous_time_ca_sampler
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