René's URL Explorer Experiment


Title: Saez Lab · GitHub

Open Graph Title: Saez Lab

X Title: Saez Lab

Description: Julio Saez-Rodriguez's group @ EMBL-EBI and Heidelberg University - Saez Lab

Open Graph Description: Julio Saez-Rodriguez's group @ EMBL-EBI and Heidelberg University - Saez Lab

X Description: Julio Saez-Rodriguez's group @ EMBL-EBI and Heidelberg University - Saez Lab

Mail addresses
saezlab@ebi.ac.uk

Opengraph URL: https://github.com/saezlab

X: @github

direct link

Domain: patch-diff.githubusercontent.com

route-pattern/:user_id(.:format)
route-controllerprofiles
route-actionshow
fetch-noncev2:cabc2cd2-5ac1-dd33-8817-14de16fb39c8
current-catalog-service-hash4a1c50a83cf6cc4b55b6b9c53e553e3f847c876b87fb333f71f5d05db8f1a7db
request-idD30A:180F02:6FF88:9DA27:69709A72
html-safe-nonce50bcdaf9e323da174bfcfc854f34458945c6971b7a00fefb752f3a3f048093c7
visitor-payloadeyJyZWZlcnJlciI6IiIsInJlcXVlc3RfaWQiOiJEMzBBOjE4MEYwMjo2RkY4ODo5REEyNzo2OTcwOUE3MiIsInZpc2l0b3JfaWQiOiI1ODc0MTQxOTM4MzE0MTU2NjU4IiwicmVnaW9uX2VkZ2UiOiJpYWQiLCJyZWdpb25fcmVuZGVyIjoiaWFkIn0=
visitor-hmac404f2a12f6bcd52460ddb5072663aa3f7a293c946573af7d6d5db4537eb46638
hovercard-subject-tagorganization:9979042
github-keyboard-shortcutscopilot
google-site-verificationApib7-x98H0j5cPqHWwSMm6dNU4GmODRoqxLiDzdx9I
octolytics-urlhttps://collector.github.com/github/collect
analytics-location/
fb:app_id1401488693436528
apple-itunes-appapp-id=1477376905, app-argument=https://github.com/saezlab
twitter:imagehttps://avatars.githubusercontent.com/u/9979042?s=280&v=4
twitter:cardsummary_large_image
og:imagehttps://avatars.githubusercontent.com/u/9979042?s=280&v=4
og:image:altJulio Saez-Rodriguez's group @ EMBL-EBI and Heidelberg University - Saez Lab
og:site_nameGitHub
og:typeprofile
profile:usernamesaezlab
hostnamegithub.com
expected-hostnamegithub.com
None9920a62ba22d06470388e2904804fb7e5ec51c9e35f81784e9191394c74b2bd2
turbo-cache-controlno-preview
turbo-body-classeslogged-out env-production page-responsive
disable-turbofalse
browser-stats-urlhttps://api.github.com/_private/browser/stats
browser-errors-urlhttps://api.github.com/_private/browser/errors
release7d6181066430cc06553c8396ca201e194ae33cb9
ui-targetfull
theme-color#1e2327
color-schemelight dark

Links:

Skip to contenthttps://patch-diff.githubusercontent.com/saezlab#start-of-content
https://patch-diff.githubusercontent.com/
Sign in https://patch-diff.githubusercontent.com/login?return_to=https%3A%2F%2Fgithub.com%2Fsaezlab
saezlabhttps://patch-diff.githubusercontent.com/saezlab
GitHub CopilotWrite better code with AIhttps://github.com/features/copilot
GitHub SparkBuild and deploy intelligent appshttps://github.com/features/spark
GitHub ModelsManage and compare promptshttps://github.com/features/models
MCP RegistryNewIntegrate external toolshttps://github.com/mcp
ActionsAutomate any workflowhttps://github.com/features/actions
CodespacesInstant dev environmentshttps://github.com/features/codespaces
IssuesPlan and track workhttps://github.com/features/issues
Code ReviewManage code changeshttps://github.com/features/code-review
GitHub Advanced SecurityFind and fix vulnerabilitieshttps://github.com/security/advanced-security
Code securitySecure your code as you buildhttps://github.com/security/advanced-security/code-security
Secret protectionStop leaks before they starthttps://github.com/security/advanced-security/secret-protection
Why GitHubhttps://github.com/why-github
Documentationhttps://docs.github.com
Bloghttps://github.blog
Changeloghttps://github.blog/changelog
Marketplacehttps://github.com/marketplace
View all featureshttps://github.com/features
Enterpriseshttps://github.com/enterprise
Small and medium teamshttps://github.com/team
Startupshttps://github.com/enterprise/startups
Nonprofitshttps://github.com/solutions/industry/nonprofits
App Modernizationhttps://github.com/solutions/use-case/app-modernization
DevSecOpshttps://github.com/solutions/use-case/devsecops
DevOpshttps://github.com/solutions/use-case/devops
CI/CDhttps://github.com/solutions/use-case/ci-cd
View all use caseshttps://github.com/solutions/use-case
Healthcarehttps://github.com/solutions/industry/healthcare
Financial serviceshttps://github.com/solutions/industry/financial-services
Manufacturinghttps://github.com/solutions/industry/manufacturing
Governmenthttps://github.com/solutions/industry/government
View all industrieshttps://github.com/solutions/industry
View all solutionshttps://github.com/solutions
AIhttps://github.com/resources/articles?topic=ai
Software Developmenthttps://github.com/resources/articles?topic=software-development
DevOpshttps://github.com/resources/articles?topic=devops
Securityhttps://github.com/resources/articles?topic=security
View all topicshttps://github.com/resources/articles
Customer storieshttps://github.com/customer-stories
Events & webinarshttps://github.com/resources/events
Ebooks & reportshttps://github.com/resources/whitepapers
Business insightshttps://github.com/solutions/executive-insights
GitHub Skillshttps://skills.github.com
Documentationhttps://docs.github.com
Customer supporthttps://support.github.com
Community forumhttps://github.com/orgs/community/discussions
Trust centerhttps://github.com/trust-center
Partnershttps://github.com/partners
GitHub SponsorsFund open source developershttps://github.com/sponsors
Security Labhttps://securitylab.github.com
Maintainer Communityhttps://maintainers.github.com
Acceleratorhttps://github.com/accelerator
Archive Programhttps://archiveprogram.github.com
Topicshttps://github.com/topics
Trendinghttps://github.com/trending
Collectionshttps://github.com/collections
Enterprise platformAI-powered developer platformhttps://github.com/enterprise
GitHub Advanced SecurityEnterprise-grade security featureshttps://github.com/security/advanced-security
Copilot for BusinessEnterprise-grade AI featureshttps://github.com/features/copilot/copilot-business
Premium SupportEnterprise-grade 24/7 supporthttps://github.com/premium-support
Pricinghttps://github.com/pricing
Search syntax tipshttps://docs.github.com/search-github/github-code-search/understanding-github-code-search-syntax
documentationhttps://docs.github.com/search-github/github-code-search/understanding-github-code-search-syntax
Sign in https://patch-diff.githubusercontent.com/login?return_to=https%3A%2F%2Fgithub.com%2Fsaezlab
Sign up https://patch-diff.githubusercontent.com/signup?ref_cta=Sign+up&ref_loc=header+logged+out&ref_page=%2F%3Corg-login%3E&source=header
Reloadhttps://patch-diff.githubusercontent.com/saezlab
Reloadhttps://patch-diff.githubusercontent.com/saezlab
Reloadhttps://patch-diff.githubusercontent.com/saezlab
425 followers https://patch-diff.githubusercontent.com/orgs/saezlab/followers
http://saezlab.orghttp://saezlab.org
@saezlabhttps://twitter.com/saezlab
Overview https://patch-diff.githubusercontent.com/saezlab
Repositories https://patch-diff.githubusercontent.com/orgs/saezlab/repositories
Projects https://patch-diff.githubusercontent.com/orgs/saezlab/projects
Packages https://patch-diff.githubusercontent.com/orgs/saezlab/packages
People https://patch-diff.githubusercontent.com/orgs/saezlab/people
Overviewhttps://patch-diff.githubusercontent.com/saezlab
Repositorieshttps://patch-diff.githubusercontent.com/orgs/saezlab/repositories
Projectshttps://patch-diff.githubusercontent.com/orgs/saezlab/projects
Packageshttps://patch-diff.githubusercontent.com/orgs/saezlab/packages
Peoplehttps://patch-diff.githubusercontent.com/orgs/saezlab/people
README.mdhttps://patch-diff.githubusercontent.com/saezlab/.github/tree/main/profile/README.md
https://saezlab.org/
https://patch-diff.githubusercontent.com/saezlab#welcome-to-saez-lab
We are a research grouphttps://saezlab.org/
Rhttps://github.com/orgs/saezlab/repositories?language=r&type=all
Pythonhttps://github.com/orgs/saezlab/repositories?language=python&type=all
https://patch-diff.githubusercontent.com/saezlab#resources
https://raw.githubusercontent.com/saezlab/.github/main/profile/icons/home.svg
https://raw.githubusercontent.com/saezlab/.github/main/profile/icons/r.svg
https://raw.githubusercontent.com/saezlab/.github/main/profile/icons/python.svg
https://raw.githubusercontent.com/saezlab/.github/main/profile/icons/package.svg
https://raw.githubusercontent.com/saezlab/.github/main/profile/icons/article.svg
https://raw.githubusercontent.com/saezlab/.github/main/profile/icons/docs-py.svg
https://raw.githubusercontent.com/saezlab/.github/main/profile/icons/docs-r.svg
https://biocypher.org/
https://saezlab.github.io/CARNIVAL
https://saezlab.github.io/CellNOptR/
https://github.com/saezlab/CollecTRI
https://biocypher.org/
https://github.com/saezlab/BioCypher
PYPIhttps://pypi.org/project/biocypher/
https://zenodo.org/records/10320714
https://saezlab.github.io/CARNIVAL
https://github.com/saezlab/CARNIVAL
BIOChttps://bioconductor.org/packages/release/bioc/html/CARNIVAL.html
https://europepmc.org/abstract/MED/31728204
https://saezlab.github.io/CellNOptR/
https://github.com/saezlab/cellnopt
BIOChttps://bioconductor.org/packages/release/bioc/html/CellNOptR.html
https://github.com/cellnopt/cellnopt
https://academic.oup.com/bioinformatics/advance-article/doi/10.1093/bioinformatics/btaa561/5855133
https://github.com/saezlab/CollecTRI
http://europepmc.org/abstract/MED/37843125
https://r.omnipathdb.org/reference/collectri.html
https://github.com/saezlab/omnipath/blob/ab2e17189bbafa2f20621e4890c3da02d4ba6c76/omnipath/_core/requests/interactions/_interactions.py#L237
https://github.com/saezlab/corneto
https://saezlab.github.io/cosmosR/
https://decoupler-py.readthedocs.io/en/latest/index.html
https://decoupler-py.readthedocs.io/en/latest/notebooks/dorothea.html
https://github.com/saezlab/corneto
PYPIhttps://pypi.org/project/corneto/
https://www.biorxiv.org/content/10.1101/2024.10.26.620390v1
https://saezlab.github.io/cosmosR/
https://github.com/saezlab/COSMOS/
BIOChttps://bioconductor.org/packages/release/bioc/html/cosmosR.html
https://networkcommons.readthedocs.io/en/main/api/networkcommons.data.network.get_cosmos_pkn.html#networkcommons.data.network.get_cosmos_pkn
https://r.omnipathdb.org/articles/cosmos.html
https://europepmc.org/abstract/MED/33502086
https://www.biorxiv.org/content/10.1101/2024.07.15.603538v2
https://decoupler-py.readthedocs.io/en/latest/index.html
https://github.com/saezlab/decoupler-py
PYPIhttps://pypi.org/project/decoupler/
https://github.com/saezlab/decoupleR
BIOChttps://bioconductor.org/packages/release/bioc/html/decoupleR.html
https://academic.oup.com/bioinformaticsadvances/article/2/1/vbac016/6544613?login=false
https://github.com/saezlab/decoupler-py
https://decoupler-py.readthedocs.io/en/latest/notebooks/dorothea.html
https://github.com/saezlab/dorothea
https://r.omnipathdb.org/reference/omnipath-interactions.html
https://europepmc.org/abstract/MED/31340985
https://europepmc.org/abstract/MED/29229604
https://europepmc.org/abstract/MED/31525460
https://saezlab.github.io/DOT/
https://saezlab.github.io/liana/
https://metalinks.omnipathdb.org/
https://saezlab.github.io/MetaProViz/
https://saezlab.github.io/DOT/
https://github.com/saezlab/DOT/
https://arxiv.org/abs/2301.01682
https://liana-py.readthedocs.io/
https://saezlab.github.io/liana/
https://github.com/saezlab/liana-py
https://github.com/saezlab/liana
https://www.biorxiv.org/content/10.1101/2023.08.19.553863v1
https://www.nature.com/articles/s41467-022-30755-0
https://metalinks.omnipathdb.org/
https://github.com/saezlab/MetalinksDB/
https://academic.oup.com/bib/article/25/4/bbae347/7717953
https://saezlab.github.io/MetaProViz/
https://github.com/saezlab/MetaProViz
https://saezlab.github.io/mistyR/
https://networkcommons.readthedocs.io/
https://saezlab.github.io/ocean/
https://omnipathdb.org/
https://saezlab.github.io/mistyR/
https://github.com/saezlab/mistyR/
BIOChttps://bioconductor.org/packages/release/bioc/html/mistyR.html
https://doi.org/10.1186/s13059-022-02663-5
https://networkcommons.readthedocs.io/
https://github.com/saezlab/networkCommons
PYPIhttps://pypi.org/project/networkcommons/
https://academic.oup.com/bioinformatics/advance-article/doi/10.1093/bioinformatics/btaf048/8002097
https://saezlab.github.io/ocean/
https://github.com/saezlab/ocean
http://europepmc.org/article/MED/36539415
https://omnipathdb.org/
https://github.com/saezlab/OmnipathR
https://r.omnipathdb.org/
BIOChttps://bioconductor.org/packages/release/bioc/html/OmnipathR.html
https://github.com/saezlab/omnipath
https://omnipath.readthedocs.io/
PYPIhttps://pypi.org/project/omnipath/
https://github.com/saezlab/pypath
https://pypath.omnipathdb.org/
PYPIhttps://pypi.org/project/pypath-omnipath/
https://github.com/saezlab/Omnipath_Cytoscape
CYTOhttps://apps.cytoscape.org/apps/omnipath
https://www.embopress.org/doi/epdf/10.15252/msb.20209923
https://rdcu.be/m53B
https://www.ncbi.nlm.nih.gov/pubmed/31886476
https://saezlab.github.io/PHONEMeS/
https://saezlab.github.io/progeny/
https://saezlab.github.io/PHONEMeS/
https://github.com/saezlab/PHONEMeS
https://github.com/saezlab/PHONEMeS-ILP
https://pubs.acs.org/doi/10.1021/acs.jproteome.0c00958
https://europepmc.org/abstract/MED/26354681
https://saezlab.github.io/progeny/
https://github.com/saezlab/progeny
https://github.com/saezlab/decoupler-py
BIOChttps://bioconductor.org/packages/release/bioc/html/progeny.html
https://europepmc.org/abstract/MED/29295995
https://europepmc.org/abstract/MED/31525460
Resourceshttps://saezlab.org/#resources
is availablehttps://github.com/saezlab/saezverse
decoupleR https://patch-diff.githubusercontent.com/saezlab/decoupleR
281 https://patch-diff.githubusercontent.com/saezlab/decoupleR/stargazers
29 https://patch-diff.githubusercontent.com/saezlab/decoupleR/forks
liana-py https://patch-diff.githubusercontent.com/saezlab/liana-py
261 https://patch-diff.githubusercontent.com/saezlab/liana-py/stargazers
28 https://patch-diff.githubusercontent.com/saezlab/liana-py/forks
liana https://patch-diff.githubusercontent.com/saezlab/liana
229 https://patch-diff.githubusercontent.com/saezlab/liana/stargazers
39 https://patch-diff.githubusercontent.com/saezlab/liana/forks
pypath https://patch-diff.githubusercontent.com/saezlab/pypath
156 https://patch-diff.githubusercontent.com/saezlab/pypath/stargazers
49 https://patch-diff.githubusercontent.com/saezlab/pypath/forks
dorothea https://patch-diff.githubusercontent.com/saezlab/dorothea
154 https://patch-diff.githubusercontent.com/saezlab/dorothea/stargazers
29 https://patch-diff.githubusercontent.com/saezlab/dorothea/forks
OmnipathR https://patch-diff.githubusercontent.com/saezlab/OmnipathR
151 https://patch-diff.githubusercontent.com/saezlab/OmnipathR/stargazers
21 https://patch-diff.githubusercontent.com/saezlab/OmnipathR/forks
gretapyhttps://patch-diff.githubusercontent.com/saezlab/gretapy
https://patch-diff.githubusercontent.com/saezlab/gretapy/graphs/commit-activity
0https://patch-diff.githubusercontent.com/saezlab/gretapy/issues
0https://patch-diff.githubusercontent.com/saezlab/gretapy/pulls
gretahttps://patch-diff.githubusercontent.com/saezlab/greta
https://patch-diff.githubusercontent.com/saezlab/greta/graphs/commit-activity
31https://patch-diff.githubusercontent.com/saezlab/greta/stargazers
3https://patch-diff.githubusercontent.com/saezlab/greta/forks
5https://patch-diff.githubusercontent.com/saezlab/greta/issues
0https://patch-diff.githubusercontent.com/saezlab/greta/pulls
OmnipathRhttps://patch-diff.githubusercontent.com/saezlab/OmnipathR
https://patch-diff.githubusercontent.com/saezlab/OmnipathR/graphs/commit-activity
151https://patch-diff.githubusercontent.com/saezlab/OmnipathR/stargazers
21https://patch-diff.githubusercontent.com/saezlab/OmnipathR/forks
19https://patch-diff.githubusercontent.com/saezlab/OmnipathR/issues
0https://patch-diff.githubusercontent.com/saezlab/OmnipathR/pulls
kidney_biopsies_ArchRhttps://patch-diff.githubusercontent.com/saezlab/kidney_biopsies_ArchR
Uh oh! There was an error while loading. Please reload this page. https://patch-diff.githubusercontent.com/saezlab/kidney_biopsies_ArchR/graphs/commit-activity
Please reload this pagehttps://patch-diff.githubusercontent.com/saezlab
0https://patch-diff.githubusercontent.com/saezlab/kidney_biopsies_ArchR/issues
0https://patch-diff.githubusercontent.com/saezlab/kidney_biopsies_ArchR/pulls
ParTIpyhttps://patch-diff.githubusercontent.com/saezlab/ParTIpy
https://patch-diff.githubusercontent.com/saezlab/ParTIpy/graphs/commit-activity
8https://patch-diff.githubusercontent.com/saezlab/ParTIpy/stargazers
0https://patch-diff.githubusercontent.com/saezlab/ParTIpy/issues
1https://patch-diff.githubusercontent.com/saezlab/ParTIpy/pulls
MetaProVizhttps://patch-diff.githubusercontent.com/saezlab/MetaProViz
https://patch-diff.githubusercontent.com/saezlab/MetaProViz/graphs/commit-activity
16https://patch-diff.githubusercontent.com/saezlab/MetaProViz/stargazers
3https://patch-diff.githubusercontent.com/saezlab/MetaProViz/forks
14https://patch-diff.githubusercontent.com/saezlab/MetaProViz/issues
1https://patch-diff.githubusercontent.com/saezlab/MetaProViz/pulls
omnipath-serverhttps://patch-diff.githubusercontent.com/saezlab/omnipath-server
https://patch-diff.githubusercontent.com/saezlab/omnipath-server/graphs/commit-activity
1https://patch-diff.githubusercontent.com/saezlab/omnipath-server/forks
0https://patch-diff.githubusercontent.com/saezlab/omnipath-server/issues
0https://patch-diff.githubusercontent.com/saezlab/omnipath-server/pulls
pypathhttps://patch-diff.githubusercontent.com/saezlab/pypath
Uh oh! There was an error while loading. Please reload this page. https://patch-diff.githubusercontent.com/saezlab/pypath/graphs/commit-activity
Please reload this pagehttps://patch-diff.githubusercontent.com/saezlab
156https://patch-diff.githubusercontent.com/saezlab/pypath/stargazers
49https://patch-diff.githubusercontent.com/saezlab/pypath/forks
12https://patch-diff.githubusercontent.com/saezlab/pypath/issues
1https://patch-diff.githubusercontent.com/saezlab/pypath/pulls
mistyRhttps://patch-diff.githubusercontent.com/saezlab/mistyR
https://patch-diff.githubusercontent.com/saezlab/mistyR/graphs/commit-activity
71https://patch-diff.githubusercontent.com/saezlab/mistyR/stargazers
13https://patch-diff.githubusercontent.com/saezlab/mistyR/forks
1https://patch-diff.githubusercontent.com/saezlab/mistyR/issues
0https://patch-diff.githubusercontent.com/saezlab/mistyR/pulls
ParTIpy_paperhttps://patch-diff.githubusercontent.com/saezlab/ParTIpy_paper
https://patch-diff.githubusercontent.com/saezlab/ParTIpy_paper/graphs/commit-activity
0https://patch-diff.githubusercontent.com/saezlab/ParTIpy_paper/issues
0https://patch-diff.githubusercontent.com/saezlab/ParTIpy_paper/pulls
View all repositorieshttps://patch-diff.githubusercontent.com/orgs/saezlab/repositories?type=all
People https://patch-diff.githubusercontent.com/orgs/saezlab/people
https://patch-diff.githubusercontent.com/pablormier
https://patch-diff.githubusercontent.com/deeenes
https://patch-diff.githubusercontent.com/naomimmurphy
https://patch-diff.githubusercontent.com/saezrodriguez
https://patch-diff.githubusercontent.com/koalive
https://patch-diff.githubusercontent.com/ahmetrifaioglu
https://patch-diff.githubusercontent.com/robinfallegger
https://patch-diff.githubusercontent.com/kpto
https://patch-diff.githubusercontent.com/adugourd
https://patch-diff.githubusercontent.com/iulusoy
https://patch-diff.githubusercontent.com/npalacioescat
https://patch-diff.githubusercontent.com/jshabbes
https://patch-diff.githubusercontent.com/roramirezf
https://patch-diff.githubusercontent.com/ChangLu92
https://patch-diff.githubusercontent.com/jlinaresb
https://patch-diff.githubusercontent.com/miguel13hh
https://patch-diff.githubusercontent.com/adminsaez
https://patch-diff.githubusercontent.com/charlotteboys
https://patch-diff.githubusercontent.com/t-soehngen
https://patch-diff.githubusercontent.com/ChristinaSchmidt1
View allhttps://patch-diff.githubusercontent.com/orgs/saezlab/people
R https://patch-diff.githubusercontent.com/orgs/saezlab/repositories?language=r&type=all
Python https://patch-diff.githubusercontent.com/orgs/saezlab/repositories?language=python&type=all
HTML https://patch-diff.githubusercontent.com/orgs/saezlab/repositories?language=html&type=all
Jupyter Notebook https://patch-diff.githubusercontent.com/orgs/saezlab/repositories?language=jupyter+notebook&type=all
Shell https://patch-diff.githubusercontent.com/orgs/saezlab/repositories?language=shell&type=all
r https://patch-diff.githubusercontent.com/search?q=topic%3Ar+org%3Asaezlab+fork%3Atrue&type=repositories
python https://patch-diff.githubusercontent.com/search?q=topic%3Apython+org%3Asaezlab+fork%3Atrue&type=repositories
transcriptomics https://patch-diff.githubusercontent.com/search?q=topic%3Atranscriptomics+org%3Asaezlab+fork%3Atrue&type=repositories
ligand-receptor https://patch-diff.githubusercontent.com/search?q=topic%3Aligand-receptor+org%3Asaezlab+fork%3Atrue&type=repositories
spatial https://patch-diff.githubusercontent.com/search?q=topic%3Aspatial+org%3Asaezlab+fork%3Atrue&type=repositories
https://github.com
Termshttps://docs.github.com/site-policy/github-terms/github-terms-of-service
Privacyhttps://docs.github.com/site-policy/privacy-policies/github-privacy-statement
Securityhttps://github.com/security
Statushttps://www.githubstatus.com/
Communityhttps://github.community/
Docshttps://docs.github.com/
Contacthttps://support.github.com?tags=dotcom-footer

Viewport: width=device-width


URLs of crawlers that visited me.