René's URL Explorer Experiment


Title: GitHub - ramanathanlab/genslm: GenSLMs: Genome-scale language models reveal SARS-CoV-2 evolutionary dynamics

Open Graph Title: GitHub - ramanathanlab/genslm: GenSLMs: Genome-scale language models reveal SARS-CoV-2 evolutionary dynamics

X Title: GitHub - ramanathanlab/genslm: GenSLMs: Genome-scale language models reveal SARS-CoV-2 evolutionary dynamics

Description: GenSLMs: Genome-scale language models reveal SARS-CoV-2 evolutionary dynamics - ramanathanlab/genslm

Open Graph Description: GenSLMs: Genome-scale language models reveal SARS-CoV-2 evolutionary dynamics - ramanathanlab/genslm

X Description: GenSLMs: Genome-scale language models reveal SARS-CoV-2 evolutionary dynamics - ramanathanlab/genslm

Opengraph URL: https://github.com/ramanathanlab/genslm

X: @github

direct link

Domain: patch-diff.githubusercontent.com

route-pattern/:user_id/:repository
route-controllerfiles
route-actiondisambiguate
fetch-noncev2:7ded5177-12cb-1785-5565-99b275e5a075
current-catalog-service-hashf3abb0cc802f3d7b95fc8762b94bdcb13bf39634c40c357301c4aa1d67a256fb
request-id8FA6:7408B:49BBA30:620EF72:698BBCAF
html-safe-noncefa32a68572662aaccbdedd90283a115231484d676dd25f2c40a77d076bb8f5de
visitor-payloadeyJyZWZlcnJlciI6IiIsInJlcXVlc3RfaWQiOiI4RkE2Ojc0MDhCOjQ5QkJBMzA6NjIwRUY3Mjo2OThCQkNBRiIsInZpc2l0b3JfaWQiOiIxMDE4NzEyMjAwODA4NDc5OTE5IiwicmVnaW9uX2VkZ2UiOiJpYWQiLCJyZWdpb25fcmVuZGVyIjoiaWFkIn0=
visitor-hmac27871cdd970afdf49767f2f4c9a3a4260306306834b7af755a868dbe59e79ec6
hovercard-subject-tagrepository:439100600
github-keyboard-shortcutsrepository,copilot
google-site-verificationApib7-x98H0j5cPqHWwSMm6dNU4GmODRoqxLiDzdx9I
octolytics-urlhttps://collector.github.com/github/collect
analytics-location//
fb:app_id1401488693436528
apple-itunes-appapp-id=1477376905, app-argument=https://github.com/ramanathanlab/genslm
twitter:imagehttps://opengraph.githubassets.com/f37d44ff82cb7f490ce963765a5b5e77c4cc31dd2fd988a93cd0420bb1be5360/ramanathanlab/genslm
twitter:cardsummary_large_image
og:imagehttps://opengraph.githubassets.com/f37d44ff82cb7f490ce963765a5b5e77c4cc31dd2fd988a93cd0420bb1be5360/ramanathanlab/genslm
og:image:altGenSLMs: Genome-scale language models reveal SARS-CoV-2 evolutionary dynamics - ramanathanlab/genslm
og:image:width1200
og:image:height600
og:site_nameGitHub
og:typeobject
hostnamegithub.com
expected-hostnamegithub.com
None640eeb7b6ff4d8d106235d228c0c286e82592d4d2403227b5b2b4fc5832297a4
turbo-cache-controlno-preview
go-importgithub.com/ramanathanlab/genslm git https://github.com/ramanathanlab/genslm.git
octolytics-dimension-user_id76222211
octolytics-dimension-user_loginramanathanlab
octolytics-dimension-repository_id439100600
octolytics-dimension-repository_nworamanathanlab/genslm
octolytics-dimension-repository_publictrue
octolytics-dimension-repository_is_forkfalse
octolytics-dimension-repository_network_root_id439100600
octolytics-dimension-repository_network_root_nworamanathanlab/genslm
turbo-body-classeslogged-out env-production page-responsive
disable-turbofalse
browser-stats-urlhttps://api.github.com/_private/browser/stats
browser-errors-urlhttps://api.github.com/_private/browser/errors
release3d444f0a47beeeac94cddbb51c91ab408befe8d4
ui-targetfull
theme-color#1e2327
color-schemelight dark

Links:

Skip to contenthttps://patch-diff.githubusercontent.com/ramanathanlab/genslm#start-of-content
https://patch-diff.githubusercontent.com/
Sign in https://patch-diff.githubusercontent.com/login?return_to=https%3A%2F%2Fgithub.com%2Framanathanlab%2Fgenslm
GitHub CopilotWrite better code with AIhttps://github.com/features/copilot
GitHub SparkBuild and deploy intelligent appshttps://github.com/features/spark
GitHub ModelsManage and compare promptshttps://github.com/features/models
MCP RegistryNewIntegrate external toolshttps://github.com/mcp
ActionsAutomate any workflowhttps://github.com/features/actions
CodespacesInstant dev environmentshttps://github.com/features/codespaces
IssuesPlan and track workhttps://github.com/features/issues
Code ReviewManage code changeshttps://github.com/features/code-review
GitHub Advanced SecurityFind and fix vulnerabilitieshttps://github.com/security/advanced-security
Code securitySecure your code as you buildhttps://github.com/security/advanced-security/code-security
Secret protectionStop leaks before they starthttps://github.com/security/advanced-security/secret-protection
Why GitHubhttps://github.com/why-github
Documentationhttps://docs.github.com
Bloghttps://github.blog
Changeloghttps://github.blog/changelog
Marketplacehttps://github.com/marketplace
View all featureshttps://github.com/features
Enterpriseshttps://github.com/enterprise
Small and medium teamshttps://github.com/team
Startupshttps://github.com/enterprise/startups
Nonprofitshttps://github.com/solutions/industry/nonprofits
App Modernizationhttps://github.com/solutions/use-case/app-modernization
DevSecOpshttps://github.com/solutions/use-case/devsecops
DevOpshttps://github.com/solutions/use-case/devops
CI/CDhttps://github.com/solutions/use-case/ci-cd
View all use caseshttps://github.com/solutions/use-case
Healthcarehttps://github.com/solutions/industry/healthcare
Financial serviceshttps://github.com/solutions/industry/financial-services
Manufacturinghttps://github.com/solutions/industry/manufacturing
Governmenthttps://github.com/solutions/industry/government
View all industrieshttps://github.com/solutions/industry
View all solutionshttps://github.com/solutions
AIhttps://github.com/resources/articles?topic=ai
Software Developmenthttps://github.com/resources/articles?topic=software-development
DevOpshttps://github.com/resources/articles?topic=devops
Securityhttps://github.com/resources/articles?topic=security
View all topicshttps://github.com/resources/articles
Customer storieshttps://github.com/customer-stories
Events & webinarshttps://github.com/resources/events
Ebooks & reportshttps://github.com/resources/whitepapers
Business insightshttps://github.com/solutions/executive-insights
GitHub Skillshttps://skills.github.com
Documentationhttps://docs.github.com
Customer supporthttps://support.github.com
Community forumhttps://github.com/orgs/community/discussions
Trust centerhttps://github.com/trust-center
Partnershttps://github.com/partners
GitHub SponsorsFund open source developershttps://github.com/sponsors
Security Labhttps://securitylab.github.com
Maintainer Communityhttps://maintainers.github.com
Acceleratorhttps://github.com/accelerator
Archive Programhttps://archiveprogram.github.com
Topicshttps://github.com/topics
Trendinghttps://github.com/trending
Collectionshttps://github.com/collections
Enterprise platformAI-powered developer platformhttps://github.com/enterprise
GitHub Advanced SecurityEnterprise-grade security featureshttps://github.com/security/advanced-security
Copilot for BusinessEnterprise-grade AI featureshttps://github.com/features/copilot/copilot-business
Premium SupportEnterprise-grade 24/7 supporthttps://github.com/premium-support
Pricinghttps://github.com/pricing
Search syntax tipshttps://docs.github.com/search-github/github-code-search/understanding-github-code-search-syntax
documentationhttps://docs.github.com/search-github/github-code-search/understanding-github-code-search-syntax
Sign in https://patch-diff.githubusercontent.com/login?return_to=https%3A%2F%2Fgithub.com%2Framanathanlab%2Fgenslm
Sign up https://patch-diff.githubusercontent.com/signup?ref_cta=Sign+up&ref_loc=header+logged+out&ref_page=%2F%3Cuser-name%3E%2F%3Crepo-name%3E&source=header-repo&source_repo=ramanathanlab%2Fgenslm
Reloadhttps://patch-diff.githubusercontent.com/ramanathanlab/genslm
Reloadhttps://patch-diff.githubusercontent.com/ramanathanlab/genslm
Reloadhttps://patch-diff.githubusercontent.com/ramanathanlab/genslm
ramanathanlab https://patch-diff.githubusercontent.com/ramanathanlab
genslmhttps://patch-diff.githubusercontent.com/ramanathanlab/genslm
Notifications https://patch-diff.githubusercontent.com/login?return_to=%2Framanathanlab%2Fgenslm
Fork 34 https://patch-diff.githubusercontent.com/login?return_to=%2Framanathanlab%2Fgenslm
Star 140 https://patch-diff.githubusercontent.com/login?return_to=%2Framanathanlab%2Fgenslm
MIT license https://patch-diff.githubusercontent.com/ramanathanlab/genslm/blob/main/LICENSE.md
140 stars https://patch-diff.githubusercontent.com/ramanathanlab/genslm/stargazers
34 forks https://patch-diff.githubusercontent.com/ramanathanlab/genslm/forks
Branches https://patch-diff.githubusercontent.com/ramanathanlab/genslm/branches
Tags https://patch-diff.githubusercontent.com/ramanathanlab/genslm/tags
Activity https://patch-diff.githubusercontent.com/ramanathanlab/genslm/activity
Star https://patch-diff.githubusercontent.com/login?return_to=%2Framanathanlab%2Fgenslm
Notifications https://patch-diff.githubusercontent.com/login?return_to=%2Framanathanlab%2Fgenslm
Code https://patch-diff.githubusercontent.com/ramanathanlab/genslm
Issues 9 https://patch-diff.githubusercontent.com/ramanathanlab/genslm/issues
Pull requests 2 https://patch-diff.githubusercontent.com/ramanathanlab/genslm/pulls
Actions https://patch-diff.githubusercontent.com/ramanathanlab/genslm/actions
Projects 0 https://patch-diff.githubusercontent.com/ramanathanlab/genslm/projects
Wiki https://patch-diff.githubusercontent.com/ramanathanlab/genslm/wiki
Security 0 https://patch-diff.githubusercontent.com/ramanathanlab/genslm/security
Insights https://patch-diff.githubusercontent.com/ramanathanlab/genslm/pulse
Code https://patch-diff.githubusercontent.com/ramanathanlab/genslm
Issues https://patch-diff.githubusercontent.com/ramanathanlab/genslm/issues
Pull requests https://patch-diff.githubusercontent.com/ramanathanlab/genslm/pulls
Actions https://patch-diff.githubusercontent.com/ramanathanlab/genslm/actions
Projects https://patch-diff.githubusercontent.com/ramanathanlab/genslm/projects
Wiki https://patch-diff.githubusercontent.com/ramanathanlab/genslm/wiki
Security https://patch-diff.githubusercontent.com/ramanathanlab/genslm/security
Insights https://patch-diff.githubusercontent.com/ramanathanlab/genslm/pulse
Brancheshttps://patch-diff.githubusercontent.com/ramanathanlab/genslm/branches
Tagshttps://patch-diff.githubusercontent.com/ramanathanlab/genslm/tags
https://patch-diff.githubusercontent.com/ramanathanlab/genslm/branches
https://patch-diff.githubusercontent.com/ramanathanlab/genslm/tags
1,674 Commitshttps://patch-diff.githubusercontent.com/ramanathanlab/genslm/commits/main/
https://patch-diff.githubusercontent.com/ramanathanlab/genslm/commits/main/
.github/ISSUE_TEMPLATEhttps://patch-diff.githubusercontent.com/ramanathanlab/genslm/tree/main/.github/ISSUE_TEMPLATE
.github/ISSUE_TEMPLATEhttps://patch-diff.githubusercontent.com/ramanathanlab/genslm/tree/main/.github/ISSUE_TEMPLATE
docshttps://patch-diff.githubusercontent.com/ramanathanlab/genslm/tree/main/docs
docshttps://patch-diff.githubusercontent.com/ramanathanlab/genslm/tree/main/docs
exampleshttps://patch-diff.githubusercontent.com/ramanathanlab/genslm/tree/main/examples
exampleshttps://patch-diff.githubusercontent.com/ramanathanlab/genslm/tree/main/examples
genslmhttps://patch-diff.githubusercontent.com/ramanathanlab/genslm/tree/main/genslm
genslmhttps://patch-diff.githubusercontent.com/ramanathanlab/genslm/tree/main/genslm
requirementshttps://patch-diff.githubusercontent.com/ramanathanlab/genslm/tree/main/requirements
requirementshttps://patch-diff.githubusercontent.com/ramanathanlab/genslm/tree/main/requirements
testshttps://patch-diff.githubusercontent.com/ramanathanlab/genslm/tree/main/tests
testshttps://patch-diff.githubusercontent.com/ramanathanlab/genslm/tree/main/tests
.gitattributeshttps://patch-diff.githubusercontent.com/ramanathanlab/genslm/blob/main/.gitattributes
.gitattributeshttps://patch-diff.githubusercontent.com/ramanathanlab/genslm/blob/main/.gitattributes
.gitignorehttps://patch-diff.githubusercontent.com/ramanathanlab/genslm/blob/main/.gitignore
.gitignorehttps://patch-diff.githubusercontent.com/ramanathanlab/genslm/blob/main/.gitignore
CODE_OF_CONDUCT.mdhttps://patch-diff.githubusercontent.com/ramanathanlab/genslm/blob/main/CODE_OF_CONDUCT.md
CODE_OF_CONDUCT.mdhttps://patch-diff.githubusercontent.com/ramanathanlab/genslm/blob/main/CODE_OF_CONDUCT.md
CONTRIBUTING.mdhttps://patch-diff.githubusercontent.com/ramanathanlab/genslm/blob/main/CONTRIBUTING.md
CONTRIBUTING.mdhttps://patch-diff.githubusercontent.com/ramanathanlab/genslm/blob/main/CONTRIBUTING.md
LICENSE.mdhttps://patch-diff.githubusercontent.com/ramanathanlab/genslm/blob/main/LICENSE.md
LICENSE.mdhttps://patch-diff.githubusercontent.com/ramanathanlab/genslm/blob/main/LICENSE.md
MANIFEST.inhttps://patch-diff.githubusercontent.com/ramanathanlab/genslm/blob/main/MANIFEST.in
MANIFEST.inhttps://patch-diff.githubusercontent.com/ramanathanlab/genslm/blob/main/MANIFEST.in
Makefilehttps://patch-diff.githubusercontent.com/ramanathanlab/genslm/blob/main/Makefile
Makefilehttps://patch-diff.githubusercontent.com/ramanathanlab/genslm/blob/main/Makefile
README.mdhttps://patch-diff.githubusercontent.com/ramanathanlab/genslm/blob/main/README.md
README.mdhttps://patch-diff.githubusercontent.com/ramanathanlab/genslm/blob/main/README.md
setup.cfghttps://patch-diff.githubusercontent.com/ramanathanlab/genslm/blob/main/setup.cfg
setup.cfghttps://patch-diff.githubusercontent.com/ramanathanlab/genslm/blob/main/setup.cfg
setup.pyhttps://patch-diff.githubusercontent.com/ramanathanlab/genslm/blob/main/setup.py
setup.pyhttps://patch-diff.githubusercontent.com/ramanathanlab/genslm/blob/main/setup.py
READMEhttps://patch-diff.githubusercontent.com/ramanathanlab/genslm
Code of conducthttps://patch-diff.githubusercontent.com/ramanathanlab/genslm
Contributinghttps://patch-diff.githubusercontent.com/ramanathanlab/genslm
MIT licensehttps://patch-diff.githubusercontent.com/ramanathanlab/genslm
https://patch-diff.githubusercontent.com/ramanathanlab/genslm#genslms-genome-scale-language-models-reveal-sars-cov-2-evolutionary-dynamics
https://user-images.githubusercontent.com/59709404/201488225-25d7eefb-29c9-4780-a1c1-d9820abcbdc3.png
https://patch-diff.githubusercontent.com/ramanathanlab/genslm#preprint
https://www.biorxiv.org/content/10.1101/2022.10.10.511571v2https://www.biorxiv.org/content/10.1101/2022.10.10.511571v2
https://patch-diff.githubusercontent.com/ramanathanlab/genslm#table-of-contents
Installationhttps://patch-diff.githubusercontent.com/ramanathanlab/genslm#installation
Usagehttps://patch-diff.githubusercontent.com/ramanathanlab/genslm#usage
Contributinghttps://patch-diff.githubusercontent.com/ramanathanlab/genslm#contributing
Licensehttps://patch-diff.githubusercontent.com/ramanathanlab/genslm#license
Citationshttps://patch-diff.githubusercontent.com/ramanathanlab/genslm#citations
https://patch-diff.githubusercontent.com/ramanathanlab/genslm#installation
Polarishttps://www.alcf.anl.gov/polaris
Perlmutterhttps://perlmutter.carrd.co/
INSTALL.mdhttps://github.com/ramanathanlab/genslm/blob/main/docs/INSTALL.md
https://patch-diff.githubusercontent.com/ramanathanlab/genslm#usage
Globus Endpointhttps://app.globus.org/file-manager?origin_id=25918ad0-2a4e-4f37-bcfc-8183b19c3150&origin_path=%2F
https://colab.research.google.com/github/ramanathanlab/genslm/blob/main/examples/embedding.ipynb
https://patch-diff.githubusercontent.com/ramanathanlab/genslm#compute-embeddings-
https://colab.research.google.com/github/ramanathanlab/genslm/blob/main/examples/generate.ipynb
https://patch-diff.githubusercontent.com/ramanathanlab/genslm#generate-synthetic-sequences-
https://patch-diff.githubusercontent.com/ramanathanlab/genslm#diffusion-model
https://github.com/da03/hierarchical_diffusion_LMhttps://github.com/da03/hierarchical_diffusion_LM
https://patch-diff.githubusercontent.com/ramanathanlab/genslm#high-performance-computing
COMMANDS.mdhttps://github.com/ramanathanlab/genslm/blob/main/docs/COMMANDS.md
https://patch-diff.githubusercontent.com/ramanathanlab/genslm#contributing
Issue Trackerhttps://github.com/ramanathanlab/genslm/issues
CONTRIBUTING.mdhttps://github.com/ramanathanlab/genslm/blob/main/CONTRIBUTING.md
https://patch-diff.githubusercontent.com/ramanathanlab/genslm#license
LICENSE.mdhttps://github.com/ramanathanlab/genslm/blob/main/LICENSE.md
https://patch-diff.githubusercontent.com/ramanathanlab/genslm#citations
Readme https://patch-diff.githubusercontent.com/ramanathanlab/genslm#readme-ov-file
MIT license https://patch-diff.githubusercontent.com/ramanathanlab/genslm#MIT-1-ov-file
Code of conduct https://patch-diff.githubusercontent.com/ramanathanlab/genslm#coc-ov-file
Contributing https://patch-diff.githubusercontent.com/ramanathanlab/genslm#contributing-ov-file
Please reload this pagehttps://patch-diff.githubusercontent.com/ramanathanlab/genslm
Activityhttps://patch-diff.githubusercontent.com/ramanathanlab/genslm/activity
Custom propertieshttps://patch-diff.githubusercontent.com/ramanathanlab/genslm/custom-properties
140 starshttps://patch-diff.githubusercontent.com/ramanathanlab/genslm/stargazers
7 watchinghttps://patch-diff.githubusercontent.com/ramanathanlab/genslm/watchers
34 forkshttps://patch-diff.githubusercontent.com/ramanathanlab/genslm/forks
Report repository https://patch-diff.githubusercontent.com/contact/report-content?content_url=https%3A%2F%2Fgithub.com%2Framanathanlab%2Fgenslm&report=ramanathanlab+%28user%29
Releases 3https://patch-diff.githubusercontent.com/ramanathanlab/genslm/releases
v0.0.4a1 Latest May 3, 2023 https://patch-diff.githubusercontent.com/ramanathanlab/genslm/releases/tag/v0.0.4a1
+ 2 releaseshttps://patch-diff.githubusercontent.com/ramanathanlab/genslm/releases
Packages 0https://patch-diff.githubusercontent.com/orgs/ramanathanlab/packages?repo_name=genslm
Please reload this pagehttps://patch-diff.githubusercontent.com/ramanathanlab/genslm
Contributors 5https://patch-diff.githubusercontent.com/ramanathanlab/genslm/graphs/contributors
Please reload this pagehttps://patch-diff.githubusercontent.com/ramanathanlab/genslm
Python 95.3% https://patch-diff.githubusercontent.com/ramanathanlab/genslm/search?l=python
Shell 4.0% https://patch-diff.githubusercontent.com/ramanathanlab/genslm/search?l=shell
https://github.com
Termshttps://docs.github.com/site-policy/github-terms/github-terms-of-service
Privacyhttps://docs.github.com/site-policy/privacy-policies/github-privacy-statement
Securityhttps://github.com/security
Statushttps://www.githubstatus.com/
Communityhttps://github.community/
Docshttps://docs.github.com/
Contacthttps://support.github.com?tags=dotcom-footer

Viewport: width=device-width


URLs of crawlers that visited me.