René's URL Explorer Experiment


Title: GitHub - ppsp-team/StratiPy: Graph regularized nonnegative matrix factorization (GNMF) in Python

Open Graph Title: GitHub - ppsp-team/StratiPy: Graph regularized nonnegative matrix factorization (GNMF) in Python

X Title: GitHub - ppsp-team/StratiPy: Graph regularized nonnegative matrix factorization (GNMF) in Python

Description: Graph regularized nonnegative matrix factorization (GNMF) in Python - ppsp-team/StratiPy

Open Graph Description: Graph regularized nonnegative matrix factorization (GNMF) in Python - ppsp-team/StratiPy

X Description: Graph regularized nonnegative matrix factorization (GNMF) in Python - ppsp-team/StratiPy

Opengraph URL: https://github.com/ppsp-team/StratiPy

X: @github

direct link

Domain: patch-diff.githubusercontent.com

route-pattern/:user_id/:repository
route-controllerfiles
route-actiondisambiguate
fetch-noncev2:eaa8fbe2-7821-a3ce-8124-c6e71b41f6aa
current-catalog-service-hashf3abb0cc802f3d7b95fc8762b94bdcb13bf39634c40c357301c4aa1d67a256fb
request-id97BC:DED9B:471C1C5:5E14A8C:698C6371
html-safe-nonce811f9b63dd96fb1b596426bc429f01e561fe1b43d01c8e0f1edef50fbb2e36c5
visitor-payloadeyJyZWZlcnJlciI6IiIsInJlcXVlc3RfaWQiOiI5N0JDOkRFRDlCOjQ3MUMxQzU6NUUxNEE4Qzo2OThDNjM3MSIsInZpc2l0b3JfaWQiOiIzNTkzMzI3Nzk1MTg1MTQ4Nzg2IiwicmVnaW9uX2VkZ2UiOiJpYWQiLCJyZWdpb25fcmVuZGVyIjoiaWFkIn0=
visitor-hmac6e7f607385d7a4bb9a35654270c7dabb2410d29cd0e4131281011b4d68fca5af
hovercard-subject-tagrepository:35160243
github-keyboard-shortcutsrepository,copilot
google-site-verificationApib7-x98H0j5cPqHWwSMm6dNU4GmODRoqxLiDzdx9I
octolytics-urlhttps://collector.github.com/github/collect
analytics-location//
fb:app_id1401488693436528
apple-itunes-appapp-id=1477376905, app-argument=https://github.com/ppsp-team/StratiPy
twitter:imagehttps://opengraph.githubassets.com/8607af06d9824ca70aaa7ce7e82a5dc8720a53bfeb2cda63c267b353e9dc39e1/ppsp-team/StratiPy
twitter:cardsummary_large_image
og:imagehttps://opengraph.githubassets.com/8607af06d9824ca70aaa7ce7e82a5dc8720a53bfeb2cda63c267b353e9dc39e1/ppsp-team/StratiPy
og:image:altGraph regularized nonnegative matrix factorization (GNMF) in Python - ppsp-team/StratiPy
og:image:width1200
og:image:height600
og:site_nameGitHub
og:typeobject
hostnamegithub.com
expected-hostnamegithub.com
None640eeb7b6ff4d8d106235d228c0c286e82592d4d2403227b5b2b4fc5832297a4
turbo-cache-controlno-preview
go-importgithub.com/ppsp-team/StratiPy git https://github.com/ppsp-team/StratiPy.git
octolytics-dimension-user_id65951336
octolytics-dimension-user_loginppsp-team
octolytics-dimension-repository_id35160243
octolytics-dimension-repository_nwoppsp-team/StratiPy
octolytics-dimension-repository_publictrue
octolytics-dimension-repository_is_forkfalse
octolytics-dimension-repository_network_root_id35160243
octolytics-dimension-repository_network_root_nwoppsp-team/StratiPy
turbo-body-classeslogged-out env-production page-responsive
disable-turbofalse
browser-stats-urlhttps://api.github.com/_private/browser/stats
browser-errors-urlhttps://api.github.com/_private/browser/errors
release3d444f0a47beeeac94cddbb51c91ab408befe8d4
ui-targetfull
theme-color#1e2327
color-schemelight dark

Links:

Skip to contenthttps://patch-diff.githubusercontent.com/ppsp-team/StratiPy#start-of-content
https://patch-diff.githubusercontent.com/
Sign in https://patch-diff.githubusercontent.com/login?return_to=https%3A%2F%2Fgithub.com%2Fppsp-team%2FStratiPy
GitHub CopilotWrite better code with AIhttps://github.com/features/copilot
GitHub SparkBuild and deploy intelligent appshttps://github.com/features/spark
GitHub ModelsManage and compare promptshttps://github.com/features/models
MCP RegistryNewIntegrate external toolshttps://github.com/mcp
ActionsAutomate any workflowhttps://github.com/features/actions
CodespacesInstant dev environmentshttps://github.com/features/codespaces
IssuesPlan and track workhttps://github.com/features/issues
Code ReviewManage code changeshttps://github.com/features/code-review
GitHub Advanced SecurityFind and fix vulnerabilitieshttps://github.com/security/advanced-security
Code securitySecure your code as you buildhttps://github.com/security/advanced-security/code-security
Secret protectionStop leaks before they starthttps://github.com/security/advanced-security/secret-protection
Why GitHubhttps://github.com/why-github
Documentationhttps://docs.github.com
Bloghttps://github.blog
Changeloghttps://github.blog/changelog
Marketplacehttps://github.com/marketplace
View all featureshttps://github.com/features
Enterpriseshttps://github.com/enterprise
Small and medium teamshttps://github.com/team
Startupshttps://github.com/enterprise/startups
Nonprofitshttps://github.com/solutions/industry/nonprofits
App Modernizationhttps://github.com/solutions/use-case/app-modernization
DevSecOpshttps://github.com/solutions/use-case/devsecops
DevOpshttps://github.com/solutions/use-case/devops
CI/CDhttps://github.com/solutions/use-case/ci-cd
View all use caseshttps://github.com/solutions/use-case
Healthcarehttps://github.com/solutions/industry/healthcare
Financial serviceshttps://github.com/solutions/industry/financial-services
Manufacturinghttps://github.com/solutions/industry/manufacturing
Governmenthttps://github.com/solutions/industry/government
View all industrieshttps://github.com/solutions/industry
View all solutionshttps://github.com/solutions
AIhttps://github.com/resources/articles?topic=ai
Software Developmenthttps://github.com/resources/articles?topic=software-development
DevOpshttps://github.com/resources/articles?topic=devops
Securityhttps://github.com/resources/articles?topic=security
View all topicshttps://github.com/resources/articles
Customer storieshttps://github.com/customer-stories
Events & webinarshttps://github.com/resources/events
Ebooks & reportshttps://github.com/resources/whitepapers
Business insightshttps://github.com/solutions/executive-insights
GitHub Skillshttps://skills.github.com
Documentationhttps://docs.github.com
Customer supporthttps://support.github.com
Community forumhttps://github.com/orgs/community/discussions
Trust centerhttps://github.com/trust-center
Partnershttps://github.com/partners
GitHub SponsorsFund open source developershttps://github.com/sponsors
Security Labhttps://securitylab.github.com
Maintainer Communityhttps://maintainers.github.com
Acceleratorhttps://github.com/accelerator
Archive Programhttps://archiveprogram.github.com
Topicshttps://github.com/topics
Trendinghttps://github.com/trending
Collectionshttps://github.com/collections
Enterprise platformAI-powered developer platformhttps://github.com/enterprise
GitHub Advanced SecurityEnterprise-grade security featureshttps://github.com/security/advanced-security
Copilot for BusinessEnterprise-grade AI featureshttps://github.com/features/copilot/copilot-business
Premium SupportEnterprise-grade 24/7 supporthttps://github.com/premium-support
Pricinghttps://github.com/pricing
Search syntax tipshttps://docs.github.com/search-github/github-code-search/understanding-github-code-search-syntax
documentationhttps://docs.github.com/search-github/github-code-search/understanding-github-code-search-syntax
Sign in https://patch-diff.githubusercontent.com/login?return_to=https%3A%2F%2Fgithub.com%2Fppsp-team%2FStratiPy
Sign up https://patch-diff.githubusercontent.com/signup?ref_cta=Sign+up&ref_loc=header+logged+out&ref_page=%2F%3Cuser-name%3E%2F%3Crepo-name%3E&source=header-repo&source_repo=ppsp-team%2FStratiPy
Reloadhttps://patch-diff.githubusercontent.com/ppsp-team/StratiPy
Reloadhttps://patch-diff.githubusercontent.com/ppsp-team/StratiPy
Reloadhttps://patch-diff.githubusercontent.com/ppsp-team/StratiPy
ppsp-team https://patch-diff.githubusercontent.com/ppsp-team
StratiPyhttps://patch-diff.githubusercontent.com/ppsp-team/StratiPy
Notifications https://patch-diff.githubusercontent.com/login?return_to=%2Fppsp-team%2FStratiPy
Fork 19 https://patch-diff.githubusercontent.com/login?return_to=%2Fppsp-team%2FStratiPy
Star 46 https://patch-diff.githubusercontent.com/login?return_to=%2Fppsp-team%2FStratiPy
BSD-3-Clause license https://patch-diff.githubusercontent.com/ppsp-team/StratiPy/blob/master/LICENSE
46 stars https://patch-diff.githubusercontent.com/ppsp-team/StratiPy/stargazers
19 forks https://patch-diff.githubusercontent.com/ppsp-team/StratiPy/forks
Branches https://patch-diff.githubusercontent.com/ppsp-team/StratiPy/branches
Tags https://patch-diff.githubusercontent.com/ppsp-team/StratiPy/tags
Activity https://patch-diff.githubusercontent.com/ppsp-team/StratiPy/activity
Star https://patch-diff.githubusercontent.com/login?return_to=%2Fppsp-team%2FStratiPy
Notifications https://patch-diff.githubusercontent.com/login?return_to=%2Fppsp-team%2FStratiPy
Code https://patch-diff.githubusercontent.com/ppsp-team/StratiPy
Issues 3 https://patch-diff.githubusercontent.com/ppsp-team/StratiPy/issues
Pull requests 0 https://patch-diff.githubusercontent.com/ppsp-team/StratiPy/pulls
Actions https://patch-diff.githubusercontent.com/ppsp-team/StratiPy/actions
Projects 0 https://patch-diff.githubusercontent.com/ppsp-team/StratiPy/projects
Wiki https://patch-diff.githubusercontent.com/ppsp-team/StratiPy/wiki
Security 0 https://patch-diff.githubusercontent.com/ppsp-team/StratiPy/security
Insights https://patch-diff.githubusercontent.com/ppsp-team/StratiPy/pulse
Code https://patch-diff.githubusercontent.com/ppsp-team/StratiPy
Issues https://patch-diff.githubusercontent.com/ppsp-team/StratiPy/issues
Pull requests https://patch-diff.githubusercontent.com/ppsp-team/StratiPy/pulls
Actions https://patch-diff.githubusercontent.com/ppsp-team/StratiPy/actions
Projects https://patch-diff.githubusercontent.com/ppsp-team/StratiPy/projects
Wiki https://patch-diff.githubusercontent.com/ppsp-team/StratiPy/wiki
Security https://patch-diff.githubusercontent.com/ppsp-team/StratiPy/security
Insights https://patch-diff.githubusercontent.com/ppsp-team/StratiPy/pulse
Brancheshttps://patch-diff.githubusercontent.com/ppsp-team/StratiPy/branches
Tagshttps://patch-diff.githubusercontent.com/ppsp-team/StratiPy/tags
https://patch-diff.githubusercontent.com/ppsp-team/StratiPy/branches
https://patch-diff.githubusercontent.com/ppsp-team/StratiPy/tags
277 Commitshttps://patch-diff.githubusercontent.com/ppsp-team/StratiPy/commits/master/
https://patch-diff.githubusercontent.com/ppsp-team/StratiPy/commits/master/
datahttps://patch-diff.githubusercontent.com/ppsp-team/StratiPy/tree/master/data
datahttps://patch-diff.githubusercontent.com/ppsp-team/StratiPy/tree/master/data
data_formattinghttps://patch-diff.githubusercontent.com/ppsp-team/StratiPy/tree/master/data_formatting
data_formattinghttps://patch-diff.githubusercontent.com/ppsp-team/StratiPy/tree/master/data_formatting
reproducibilityhttps://patch-diff.githubusercontent.com/ppsp-team/StratiPy/tree/master/reproducibility
reproducibilityhttps://patch-diff.githubusercontent.com/ppsp-team/StratiPy/tree/master/reproducibility
simulationhttps://patch-diff.githubusercontent.com/ppsp-team/StratiPy/tree/master/simulation
simulationhttps://patch-diff.githubusercontent.com/ppsp-team/StratiPy/tree/master/simulation
stratipyhttps://patch-diff.githubusercontent.com/ppsp-team/StratiPy/tree/master/stratipy
stratipyhttps://patch-diff.githubusercontent.com/ppsp-team/StratiPy/tree/master/stratipy
testhttps://patch-diff.githubusercontent.com/ppsp-team/StratiPy/tree/master/test
testhttps://patch-diff.githubusercontent.com/ppsp-team/StratiPy/tree/master/test
.gitignorehttps://patch-diff.githubusercontent.com/ppsp-team/StratiPy/blob/master/.gitignore
.gitignorehttps://patch-diff.githubusercontent.com/ppsp-team/StratiPy/blob/master/.gitignore
.travis.ymlhttps://patch-diff.githubusercontent.com/ppsp-team/StratiPy/blob/master/.travis.yml
.travis.ymlhttps://patch-diff.githubusercontent.com/ppsp-team/StratiPy/blob/master/.travis.yml
AUTHORS.mdhttps://patch-diff.githubusercontent.com/ppsp-team/StratiPy/blob/master/AUTHORS.md
AUTHORS.mdhttps://patch-diff.githubusercontent.com/ppsp-team/StratiPy/blob/master/AUTHORS.md
Dockerfilehttps://patch-diff.githubusercontent.com/ppsp-team/StratiPy/blob/master/Dockerfile
Dockerfilehttps://patch-diff.githubusercontent.com/ppsp-team/StratiPy/blob/master/Dockerfile
LICENSEhttps://patch-diff.githubusercontent.com/ppsp-team/StratiPy/blob/master/LICENSE
LICENSEhttps://patch-diff.githubusercontent.com/ppsp-team/StratiPy/blob/master/LICENSE
README.mdhttps://patch-diff.githubusercontent.com/ppsp-team/StratiPy/blob/master/README.md
README.mdhttps://patch-diff.githubusercontent.com/ppsp-team/StratiPy/blob/master/README.md
requirements.txthttps://patch-diff.githubusercontent.com/ppsp-team/StratiPy/blob/master/requirements.txt
requirements.txthttps://patch-diff.githubusercontent.com/ppsp-team/StratiPy/blob/master/requirements.txt
setup.pyhttps://patch-diff.githubusercontent.com/ppsp-team/StratiPy/blob/master/setup.py
setup.pyhttps://patch-diff.githubusercontent.com/ppsp-team/StratiPy/blob/master/setup.py
READMEhttps://patch-diff.githubusercontent.com/ppsp-team/StratiPy
BSD-3-Clause licensehttps://patch-diff.githubusercontent.com/ppsp-team/StratiPy
https://camo.githubusercontent.com/315dc821d30d7c97787cc0e7748ecddffed745513f66f904945e94b29b082409/68747470733a2f2f696d672e736869656c64732e696f2f62616467652f76657273696f6e2d302e382e302d626c75652e737667
https://travis-ci.org/GHFC/StratiPy
https://opensource.org/licenses/BSD-3-Clause
https://zenodo.org/badge/latestdoi/53434086
https://patch-diff.githubusercontent.com/ppsp-team/StratiPy#stratipy----
https://patch-diff.githubusercontent.com/ppsp-team/StratiPy#dependencies
https://patch-diff.githubusercontent.com/ppsp-team/StratiPy#reproducibility
our paper about reproducibility in bioinformaticshttps://doi.org/10.1093/gigascience/giy077
reproducibility.ipynbhttps://patch-diff.githubusercontent.com/ppsp-team/StratiPy/blob/master/reproducibility/reproducibility.ipynb
Dockerhttp://docker.com
Windows settinghttps://docs.docker.com/docker-for-windows/#advanced
Mac settinghttps://docs.docker.com/docker-for-mac/#cpus
https://patch-diff.githubusercontent.com/ppsp-team/StratiPy#references
Hofree et al. Nat. Meth. 2013http://www.nature.com/nmeth/journal/v10/n11/full/nmeth.2651.html
Monti et al. Mach. Learn.2003http://link.springer.com/article/10.1023%2FA%3A1023949509487
Kim et al. GigaScience 2018https://doi.org/10.1093/gigascience/giy077
https://patch-diff.githubusercontent.com/ppsp-team/StratiPy#additional-links
Network Based Stratification (NBS)http://chianti.ucsd.edu/~mhofree/wordpress/?page_id=26
NMF on Manifold (Graph), Deng Caihttp://www.cad.zju.edu.cn/home/dengcai/Data/GNMF.html
NMF Toolboxhttps://sites.google.com/site/nmftool/
nimfa libraryhttp://nimfa.biolab.si/
https://patch-diff.githubusercontent.com/ppsp-team/StratiPy#licensing
python https://patch-diff.githubusercontent.com/topics/python
bioinformatics https://patch-diff.githubusercontent.com/topics/bioinformatics
genomics https://patch-diff.githubusercontent.com/topics/genomics
graph https://patch-diff.githubusercontent.com/topics/graph
ppi https://patch-diff.githubusercontent.com/topics/ppi
nmf https://patch-diff.githubusercontent.com/topics/nmf
stratification https://patch-diff.githubusercontent.com/topics/stratification
Readme https://patch-diff.githubusercontent.com/ppsp-team/StratiPy#readme-ov-file
BSD-3-Clause license https://patch-diff.githubusercontent.com/ppsp-team/StratiPy#BSD-3-Clause-1-ov-file
Please reload this pagehttps://patch-diff.githubusercontent.com/ppsp-team/StratiPy
Activityhttps://patch-diff.githubusercontent.com/ppsp-team/StratiPy/activity
Custom propertieshttps://patch-diff.githubusercontent.com/ppsp-team/StratiPy/custom-properties
46 starshttps://patch-diff.githubusercontent.com/ppsp-team/StratiPy/stargazers
7 watchinghttps://patch-diff.githubusercontent.com/ppsp-team/StratiPy/watchers
19 forkshttps://patch-diff.githubusercontent.com/ppsp-team/StratiPy/forks
Report repository https://patch-diff.githubusercontent.com/contact/report-content?content_url=https%3A%2F%2Fgithub.com%2Fppsp-team%2FStratiPy&report=ppsp-team+%28user%29
Releaseshttps://patch-diff.githubusercontent.com/ppsp-team/StratiPy/releases
Packages 0https://patch-diff.githubusercontent.com/orgs/ppsp-team/packages?repo_name=StratiPy
Please reload this pagehttps://patch-diff.githubusercontent.com/ppsp-team/StratiPy
Contributors 3https://patch-diff.githubusercontent.com/ppsp-team/StratiPy/graphs/contributors
Please reload this pagehttps://patch-diff.githubusercontent.com/ppsp-team/StratiPy
Jupyter Notebook 52.7% https://patch-diff.githubusercontent.com/ppsp-team/StratiPy/search?l=jupyter-notebook
Python 45.3% https://patch-diff.githubusercontent.com/ppsp-team/StratiPy/search?l=python
R 1.7% https://patch-diff.githubusercontent.com/ppsp-team/StratiPy/search?l=r
https://github.com
Termshttps://docs.github.com/site-policy/github-terms/github-terms-of-service
Privacyhttps://docs.github.com/site-policy/privacy-policies/github-privacy-statement
Securityhttps://github.com/security
Statushttps://www.githubstatus.com/
Communityhttps://github.community/
Docshttps://docs.github.com/
Contacthttps://support.github.com?tags=dotcom-footer

Viewport: width=device-width

URLs of crawlers that visited me.