René's URL Explorer Experiment


Title: GitHub - moshi4/COGclassifier: A tool for classifying prokaryote protein sequences into COG(Cluster of Orthologous Genes) functional category

Open Graph Title: GitHub - moshi4/COGclassifier: A tool for classifying prokaryote protein sequences into COG(Cluster of Orthologous Genes) functional category

X Title: GitHub - moshi4/COGclassifier: A tool for classifying prokaryote protein sequences into COG(Cluster of Orthologous Genes) functional category

Description: A tool for classifying prokaryote protein sequences into COG(Cluster of Orthologous Genes) functional category - moshi4/COGclassifier

Open Graph Description: A tool for classifying prokaryote protein sequences into COG(Cluster of Orthologous Genes) functional category - moshi4/COGclassifier

X Description: A tool for classifying prokaryote protein sequences into COG(Cluster of Orthologous Genes) functional category - moshi4/COGclassifier

Opengraph URL: https://github.com/moshi4/COGclassifier

X: @github

direct link

Domain: patch-diff.githubusercontent.com

route-pattern/:user_id/:repository
route-controllerfiles
route-actiondisambiguate
fetch-noncev2:3404e44e-3e22-6d08-0556-9b17d912ea54
current-catalog-service-hashf3abb0cc802f3d7b95fc8762b94bdcb13bf39634c40c357301c4aa1d67a256fb
request-idAA4E:5D9CD:D207C0:1135DD0:698D56D0
html-safe-nonced8da5ae68d149b99e584d768bc8aeaddeda65314248eb9d74e31c4b9cb430540
visitor-payloadeyJyZWZlcnJlciI6IiIsInJlcXVlc3RfaWQiOiJBQTRFOjVEOUNEOkQyMDdDMDoxMTM1REQwOjY5OEQ1NkQwIiwidmlzaXRvcl9pZCI6IjE5MzM1MDMwNjE5MTQ2MzgwMzIiLCJyZWdpb25fZWRnZSI6ImlhZCIsInJlZ2lvbl9yZW5kZXIiOiJpYWQifQ==
visitor-hmac4000fab5f88038aaf90c1cc5af9a98c9da42fcbac6ccb4b18adb3d6800415c24
hovercard-subject-tagrepository:471279149
github-keyboard-shortcutsrepository,copilot
google-site-verificationApib7-x98H0j5cPqHWwSMm6dNU4GmODRoqxLiDzdx9I
octolytics-urlhttps://collector.github.com/github/collect
analytics-location//
fb:app_id1401488693436528
apple-itunes-appapp-id=1477376905, app-argument=https://github.com/moshi4/COGclassifier
twitter:imagehttps://repository-images.githubusercontent.com/471279149/d0691081-78c4-4ae7-9313-dfc2969589f0
twitter:cardsummary_large_image
og:imagehttps://repository-images.githubusercontent.com/471279149/d0691081-78c4-4ae7-9313-dfc2969589f0
og:image:altA tool for classifying prokaryote protein sequences into COG(Cluster of Orthologous Genes) functional category - moshi4/COGclassifier
og:site_nameGitHub
og:typeobject
hostnamegithub.com
expected-hostnamegithub.com
Nonec0818105fa276287e9369cfdefa0a0fa7953719791ceff9b94d69623c0a4fe8a
turbo-cache-controlno-preview
go-importgithub.com/moshi4/COGclassifier git https://github.com/moshi4/COGclassifier.git
octolytics-dimension-user_id41852815
octolytics-dimension-user_loginmoshi4
octolytics-dimension-repository_id471279149
octolytics-dimension-repository_nwomoshi4/COGclassifier
octolytics-dimension-repository_publictrue
octolytics-dimension-repository_is_forkfalse
octolytics-dimension-repository_network_root_id471279149
octolytics-dimension-repository_network_root_nwomoshi4/COGclassifier
turbo-body-classeslogged-out env-production page-responsive
disable-turbofalse
browser-stats-urlhttps://api.github.com/_private/browser/stats
browser-errors-urlhttps://api.github.com/_private/browser/errors
releasea95a17cc440c14d4fcddc0641bc1136fa8d908f0
ui-targetfull
theme-color#1e2327
color-schemelight dark

Links:

Skip to contenthttps://patch-diff.githubusercontent.com/moshi4/COGclassifier#start-of-content
https://patch-diff.githubusercontent.com/
Sign in https://patch-diff.githubusercontent.com/login?return_to=https%3A%2F%2Fgithub.com%2Fmoshi4%2FCOGclassifier
GitHub CopilotWrite better code with AIhttps://github.com/features/copilot
GitHub SparkBuild and deploy intelligent appshttps://github.com/features/spark
GitHub ModelsManage and compare promptshttps://github.com/features/models
MCP RegistryNewIntegrate external toolshttps://github.com/mcp
ActionsAutomate any workflowhttps://github.com/features/actions
CodespacesInstant dev environmentshttps://github.com/features/codespaces
IssuesPlan and track workhttps://github.com/features/issues
Code ReviewManage code changeshttps://github.com/features/code-review
GitHub Advanced SecurityFind and fix vulnerabilitieshttps://github.com/security/advanced-security
Code securitySecure your code as you buildhttps://github.com/security/advanced-security/code-security
Secret protectionStop leaks before they starthttps://github.com/security/advanced-security/secret-protection
Why GitHubhttps://github.com/why-github
Documentationhttps://docs.github.com
Bloghttps://github.blog
Changeloghttps://github.blog/changelog
Marketplacehttps://github.com/marketplace
View all featureshttps://github.com/features
Enterpriseshttps://github.com/enterprise
Small and medium teamshttps://github.com/team
Startupshttps://github.com/enterprise/startups
Nonprofitshttps://github.com/solutions/industry/nonprofits
App Modernizationhttps://github.com/solutions/use-case/app-modernization
DevSecOpshttps://github.com/solutions/use-case/devsecops
DevOpshttps://github.com/solutions/use-case/devops
CI/CDhttps://github.com/solutions/use-case/ci-cd
View all use caseshttps://github.com/solutions/use-case
Healthcarehttps://github.com/solutions/industry/healthcare
Financial serviceshttps://github.com/solutions/industry/financial-services
Manufacturinghttps://github.com/solutions/industry/manufacturing
Governmenthttps://github.com/solutions/industry/government
View all industrieshttps://github.com/solutions/industry
View all solutionshttps://github.com/solutions
AIhttps://github.com/resources/articles?topic=ai
Software Developmenthttps://github.com/resources/articles?topic=software-development
DevOpshttps://github.com/resources/articles?topic=devops
Securityhttps://github.com/resources/articles?topic=security
View all topicshttps://github.com/resources/articles
Customer storieshttps://github.com/customer-stories
Events & webinarshttps://github.com/resources/events
Ebooks & reportshttps://github.com/resources/whitepapers
Business insightshttps://github.com/solutions/executive-insights
GitHub Skillshttps://skills.github.com
Documentationhttps://docs.github.com
Customer supporthttps://support.github.com
Community forumhttps://github.com/orgs/community/discussions
Trust centerhttps://github.com/trust-center
Partnershttps://github.com/partners
GitHub SponsorsFund open source developershttps://github.com/sponsors
Security Labhttps://securitylab.github.com
Maintainer Communityhttps://maintainers.github.com
Acceleratorhttps://github.com/accelerator
Archive Programhttps://archiveprogram.github.com
Topicshttps://github.com/topics
Trendinghttps://github.com/trending
Collectionshttps://github.com/collections
Enterprise platformAI-powered developer platformhttps://github.com/enterprise
GitHub Advanced SecurityEnterprise-grade security featureshttps://github.com/security/advanced-security
Copilot for BusinessEnterprise-grade AI featureshttps://github.com/features/copilot/copilot-business
Premium SupportEnterprise-grade 24/7 supporthttps://github.com/premium-support
Pricinghttps://github.com/pricing
Search syntax tipshttps://docs.github.com/search-github/github-code-search/understanding-github-code-search-syntax
documentationhttps://docs.github.com/search-github/github-code-search/understanding-github-code-search-syntax
Sign in https://patch-diff.githubusercontent.com/login?return_to=https%3A%2F%2Fgithub.com%2Fmoshi4%2FCOGclassifier
Sign up https://patch-diff.githubusercontent.com/signup?ref_cta=Sign+up&ref_loc=header+logged+out&ref_page=%2F%3Cuser-name%3E%2F%3Crepo-name%3E&source=header-repo&source_repo=moshi4%2FCOGclassifier
Reloadhttps://patch-diff.githubusercontent.com/moshi4/COGclassifier
Reloadhttps://patch-diff.githubusercontent.com/moshi4/COGclassifier
Reloadhttps://patch-diff.githubusercontent.com/moshi4/COGclassifier
moshi4 https://patch-diff.githubusercontent.com/moshi4
COGclassifierhttps://patch-diff.githubusercontent.com/moshi4/COGclassifier
Notifications https://patch-diff.githubusercontent.com/login?return_to=%2Fmoshi4%2FCOGclassifier
Fork 5 https://patch-diff.githubusercontent.com/login?return_to=%2Fmoshi4%2FCOGclassifier
Star 82 https://patch-diff.githubusercontent.com/login?return_to=%2Fmoshi4%2FCOGclassifier
MIT license https://patch-diff.githubusercontent.com/moshi4/COGclassifier/blob/main/LICENSE
82 stars https://patch-diff.githubusercontent.com/moshi4/COGclassifier/stargazers
5 forks https://patch-diff.githubusercontent.com/moshi4/COGclassifier/forks
Branches https://patch-diff.githubusercontent.com/moshi4/COGclassifier/branches
Tags https://patch-diff.githubusercontent.com/moshi4/COGclassifier/tags
Activity https://patch-diff.githubusercontent.com/moshi4/COGclassifier/activity
Star https://patch-diff.githubusercontent.com/login?return_to=%2Fmoshi4%2FCOGclassifier
Notifications https://patch-diff.githubusercontent.com/login?return_to=%2Fmoshi4%2FCOGclassifier
Code https://patch-diff.githubusercontent.com/moshi4/COGclassifier
Issues 0 https://patch-diff.githubusercontent.com/moshi4/COGclassifier/issues
Pull requests 0 https://patch-diff.githubusercontent.com/moshi4/COGclassifier/pulls
Discussions https://patch-diff.githubusercontent.com/moshi4/COGclassifier/discussions
Actions https://patch-diff.githubusercontent.com/moshi4/COGclassifier/actions
Projects 0 https://patch-diff.githubusercontent.com/moshi4/COGclassifier/projects
Security 0 https://patch-diff.githubusercontent.com/moshi4/COGclassifier/security
Insights https://patch-diff.githubusercontent.com/moshi4/COGclassifier/pulse
Code https://patch-diff.githubusercontent.com/moshi4/COGclassifier
Issues https://patch-diff.githubusercontent.com/moshi4/COGclassifier/issues
Pull requests https://patch-diff.githubusercontent.com/moshi4/COGclassifier/pulls
Discussions https://patch-diff.githubusercontent.com/moshi4/COGclassifier/discussions
Actions https://patch-diff.githubusercontent.com/moshi4/COGclassifier/actions
Projects https://patch-diff.githubusercontent.com/moshi4/COGclassifier/projects
Security https://patch-diff.githubusercontent.com/moshi4/COGclassifier/security
Insights https://patch-diff.githubusercontent.com/moshi4/COGclassifier/pulse
Brancheshttps://patch-diff.githubusercontent.com/moshi4/COGclassifier/branches
Tagshttps://patch-diff.githubusercontent.com/moshi4/COGclassifier/tags
https://patch-diff.githubusercontent.com/moshi4/COGclassifier/branches
https://patch-diff.githubusercontent.com/moshi4/COGclassifier/tags
109 Commitshttps://patch-diff.githubusercontent.com/moshi4/COGclassifier/commits/main/
https://patch-diff.githubusercontent.com/moshi4/COGclassifier/commits/main/
.github/workflowshttps://patch-diff.githubusercontent.com/moshi4/COGclassifier/tree/main/.github/workflows
.github/workflowshttps://patch-diff.githubusercontent.com/moshi4/COGclassifier/tree/main/.github/workflows
examplehttps://patch-diff.githubusercontent.com/moshi4/COGclassifier/tree/main/example
examplehttps://patch-diff.githubusercontent.com/moshi4/COGclassifier/tree/main/example
src/cogclassifierhttps://patch-diff.githubusercontent.com/moshi4/COGclassifier/tree/main/src/cogclassifier
src/cogclassifierhttps://patch-diff.githubusercontent.com/moshi4/COGclassifier/tree/main/src/cogclassifier
testshttps://patch-diff.githubusercontent.com/moshi4/COGclassifier/tree/main/tests
testshttps://patch-diff.githubusercontent.com/moshi4/COGclassifier/tree/main/tests
.gitattributeshttps://patch-diff.githubusercontent.com/moshi4/COGclassifier/blob/main/.gitattributes
.gitattributeshttps://patch-diff.githubusercontent.com/moshi4/COGclassifier/blob/main/.gitattributes
.gitignorehttps://patch-diff.githubusercontent.com/moshi4/COGclassifier/blob/main/.gitignore
.gitignorehttps://patch-diff.githubusercontent.com/moshi4/COGclassifier/blob/main/.gitignore
.pre-commit-config.yamlhttps://patch-diff.githubusercontent.com/moshi4/COGclassifier/blob/main/.pre-commit-config.yaml
.pre-commit-config.yamlhttps://patch-diff.githubusercontent.com/moshi4/COGclassifier/blob/main/.pre-commit-config.yaml
CITATION.cffhttps://patch-diff.githubusercontent.com/moshi4/COGclassifier/blob/main/CITATION.cff
CITATION.cffhttps://patch-diff.githubusercontent.com/moshi4/COGclassifier/blob/main/CITATION.cff
LICENSEhttps://patch-diff.githubusercontent.com/moshi4/COGclassifier/blob/main/LICENSE
LICENSEhttps://patch-diff.githubusercontent.com/moshi4/COGclassifier/blob/main/LICENSE
README.mdhttps://patch-diff.githubusercontent.com/moshi4/COGclassifier/blob/main/README.md
README.mdhttps://patch-diff.githubusercontent.com/moshi4/COGclassifier/blob/main/README.md
pyproject.tomlhttps://patch-diff.githubusercontent.com/moshi4/COGclassifier/blob/main/pyproject.toml
pyproject.tomlhttps://patch-diff.githubusercontent.com/moshi4/COGclassifier/blob/main/pyproject.toml
requirements-dev.lockhttps://patch-diff.githubusercontent.com/moshi4/COGclassifier/blob/main/requirements-dev.lock
requirements-dev.lockhttps://patch-diff.githubusercontent.com/moshi4/COGclassifier/blob/main/requirements-dev.lock
requirements.lockhttps://patch-diff.githubusercontent.com/moshi4/COGclassifier/blob/main/requirements.lock
requirements.lockhttps://patch-diff.githubusercontent.com/moshi4/COGclassifier/blob/main/requirements.lock
READMEhttps://patch-diff.githubusercontent.com/moshi4/COGclassifier
MIT licensehttps://patch-diff.githubusercontent.com/moshi4/COGclassifier
https://patch-diff.githubusercontent.com/moshi4/COGclassifier#cogclassifier
https://camo.githubusercontent.com/bdd72d1dc5697a607b1a8fbdb3b1a6d0b84b98d840b98995a6ae5c6a287526d4/68747470733a2f2f696d672e736869656c64732e696f2f62616467652f4c616e67756167652d507974686f6e332d737465656c626c7565
https://camo.githubusercontent.com/d887573bfb6af2ed017304f7a7e95f4674dd88ff8ad1f3db507f7d4320a580a2/68747470733a2f2f696d672e736869656c64732e696f2f62616467652f4f532d57696e646f77735f2537435f4d61635f2537435f4c696e75782d737465656c626c7565
https://camo.githubusercontent.com/7dc2d2703872ce0d255f48cf27e9761f89f3e353a97a0b87140f10bc3d58f733/68747470733a2f2f696d672e736869656c64732e696f2f62616467652f4c6963656e73652d4d49542d737465656c626c7565
https://pypi.python.org/pypi/cogclassifier
https://anaconda.org/bioconda/cogclassifier
https://github.com/moshi4/COGclassifier/actions/workflows/ci.yml/badge.svg
https://patch-diff.githubusercontent.com/moshi4/COGclassifier#table-of-contents
Overviewhttps://patch-diff.githubusercontent.com/moshi4/COGclassifier#overview
Installationhttps://patch-diff.githubusercontent.com/moshi4/COGclassifier#installation
Workflowhttps://patch-diff.githubusercontent.com/moshi4/COGclassifier#workflow
Usagehttps://patch-diff.githubusercontent.com/moshi4/COGclassifier#usage
Output Contentshttps://patch-diff.githubusercontent.com/moshi4/COGclassifier#output-contents
Customize Chartshttps://patch-diff.githubusercontent.com/moshi4/COGclassifier#customize-charts
https://patch-diff.githubusercontent.com/moshi4/COGclassifier#overview
https://raw.githubusercontent.com/moshi4/COGclassifier/main/example/output/ecoli/cog_count_barchart.png
https://raw.githubusercontent.com/moshi4/COGclassifier/main/example/output/ecoli/cog_count_piechart.png
https://patch-diff.githubusercontent.com/moshi4/COGclassifier#installation
https://patch-diff.githubusercontent.com/moshi4/COGclassifier#workflow
cdd2coghttps://github.com/aleimba/bac-genomics-scripts/tree/master/cdd2cog
https://patch-diff.githubusercontent.com/moshi4/COGclassifier#1-setup-cog--cdd-resources
https://ftp.ncbi.nih.gov/pub/COG/COG2024/data/cog-24.fun.tabhttps://ftp.ncbi.nih.gov/pub/COG/COG2024/data/cog-24.fun.tab
https://ftp.ncbi.nih.gov/pub/COG/COG2024/data/Readme.COG2024.txthttps://ftp.ncbi.nih.gov/pub/COG/COG2024/data/Readme.COG2024.txt
https://ftp.ncbi.nih.gov/pub/COG/COG2024/data/cog-24.def.tabhttps://ftp.ncbi.nih.gov/pub/COG/COG2024/data/cog-24.def.tab
https://ftp.ncbi.nih.gov/pub/COG/COG2024/data/Readme.COG2024.txthttps://ftp.ncbi.nih.gov/pub/COG/COG2024/data/Readme.COG2024.txt
https://ftp.ncbi.nih.gov/pub/mmdb/cdd/https://ftp.ncbi.nih.gov/pub/mmdb/cdd/
https://ftp.ncbi.nih.gov/pub/mmdb/cdd/READMEhttps://ftp.ncbi.nih.gov/pub/mmdb/cdd/README
https://ftp.ncbi.nih.gov/pub/mmdb/cdd/little_endian/https://ftp.ncbi.nih.gov/pub/mmdb/cdd/little_endian/
https://patch-diff.githubusercontent.com/moshi4/COGclassifier#2-rps-blast-search-against-cog-database
https://patch-diff.githubusercontent.com/moshi4/COGclassifier#3-classify-query-sequences-into-cog-functional-category
https://patch-diff.githubusercontent.com/moshi4/COGclassifier#usage
https://patch-diff.githubusercontent.com/moshi4/COGclassifier#basic-command
https://patch-diff.githubusercontent.com/moshi4/COGclassifier#options
https://patch-diff.githubusercontent.com/moshi4/COGclassifier#example-command
herehttps://github.com/moshi4/COGclassifier/raw/main/example/example.zip
https://patch-diff.githubusercontent.com/moshi4/COGclassifier#output-contents
examplehttps://github.com/moshi4/COGclassifier/blob/main/example/output/mycoplasma/rpsblast.tsv
examplehttps://github.com/moshi4/COGclassifier/blob/main/example/output/mycoplasma/cog_classify.tsv
examplehttps://github.com/moshi4/COGclassifier/blob/main/example/output/ecoli/cog_count.tsv
examplehttps://github.com/moshi4/COGclassifier/blob/main/example/output/ecoli/cogclassifier.log
Altairhttps://altair-viz.github.io/
https://raw.githubusercontent.com/moshi4/COGclassifier/main/example/output/ecoli/cog_count_barchart.png
https://raw.githubusercontent.com/moshi4/COGclassifier/main/example/output/ecoli/cog_count_piechart.png
https://patch-diff.githubusercontent.com/moshi4/COGclassifier#customize-charts
notebookshttps://github.com/moshi4/COGclassifier/blob/main/example/plot/plot_example.ipynb
https://patch-diff.githubusercontent.com/moshi4/COGclassifier#plot_cog_count_barchart
https://patch-diff.githubusercontent.com/moshi4/COGclassifier#plot_cog_count_piechart
visualization https://patch-diff.githubusercontent.com/topics/visualization
python https://patch-diff.githubusercontent.com/topics/python
bioinformatics https://patch-diff.githubusercontent.com/topics/bioinformatics
cog https://patch-diff.githubusercontent.com/topics/cog
genomics https://patch-diff.githubusercontent.com/topics/genomics
protein https://patch-diff.githubusercontent.com/topics/protein
microbial-genomics https://patch-diff.githubusercontent.com/topics/microbial-genomics
comparative-genomics https://patch-diff.githubusercontent.com/topics/comparative-genomics
genome-analysis https://patch-diff.githubusercontent.com/topics/genome-analysis
functional-analysis https://patch-diff.githubusercontent.com/topics/functional-analysis
functional-annotation https://patch-diff.githubusercontent.com/topics/functional-annotation
Readme https://patch-diff.githubusercontent.com/moshi4/COGclassifier#readme-ov-file
MIT license https://patch-diff.githubusercontent.com/moshi4/COGclassifier#MIT-1-ov-file
Please reload this pagehttps://patch-diff.githubusercontent.com/moshi4/COGclassifier
Activityhttps://patch-diff.githubusercontent.com/moshi4/COGclassifier/activity
82 starshttps://patch-diff.githubusercontent.com/moshi4/COGclassifier/stargazers
2 watchinghttps://patch-diff.githubusercontent.com/moshi4/COGclassifier/watchers
5 forkshttps://patch-diff.githubusercontent.com/moshi4/COGclassifier/forks
Report repository https://patch-diff.githubusercontent.com/contact/report-content?content_url=https%3A%2F%2Fgithub.com%2Fmoshi4%2FCOGclassifier&report=moshi4+%28user%29
Releases 8https://patch-diff.githubusercontent.com/moshi4/COGclassifier/releases
v2.0.0 Latest Apr 19, 2025 https://patch-diff.githubusercontent.com/moshi4/COGclassifier/releases/tag/v2.0.0
+ 7 releaseshttps://patch-diff.githubusercontent.com/moshi4/COGclassifier/releases
Please reload this pagehttps://patch-diff.githubusercontent.com/moshi4/COGclassifier
Python 100.0% https://patch-diff.githubusercontent.com/moshi4/COGclassifier/search?l=python
https://github.com
Termshttps://docs.github.com/site-policy/github-terms/github-terms-of-service
Privacyhttps://docs.github.com/site-policy/privacy-policies/github-privacy-statement
Securityhttps://github.com/security
Statushttps://www.githubstatus.com/
Communityhttps://github.community/
Docshttps://docs.github.com/
Contacthttps://support.github.com?tags=dotcom-footer

Viewport: width=device-width


URLs of crawlers that visited me.