René's URL Explorer Experiment


Title: GitHub - jlboat/NextflowScripts: Misc. Nextflow scripts

Open Graph Title: GitHub - jlboat/NextflowScripts: Misc. Nextflow scripts

X Title: GitHub - jlboat/NextflowScripts: Misc. Nextflow scripts

Description: Misc. Nextflow scripts. Contribute to jlboat/NextflowScripts development by creating an account on GitHub.

Open Graph Description: Misc. Nextflow scripts. Contribute to jlboat/NextflowScripts development by creating an account on GitHub.

X Description: Misc. Nextflow scripts. Contribute to jlboat/NextflowScripts development by creating an account on GitHub.

Opengraph URL: https://github.com/jlboat/NextflowScripts

X: @github

direct link

Domain: patch-diff.githubusercontent.com

route-pattern/:user_id/:repository
route-controllerfiles
route-actiondisambiguate
fetch-noncev2:dce2c48f-bafc-17d0-86dd-6b76ef00f252
current-catalog-service-hashf3abb0cc802f3d7b95fc8762b94bdcb13bf39634c40c357301c4aa1d67a256fb
request-idBDA6:3140D:88BF1B:B270C4:698D4B29
html-safe-nonce2cdc3e6246873ca4380e84bf1a00cd3b7a457066415d3b9302d456fd0f4b9d11
visitor-payloadeyJyZWZlcnJlciI6IiIsInJlcXVlc3RfaWQiOiJCREE2OjMxNDBEOjg4QkYxQjpCMjcwQzQ6Njk4RDRCMjkiLCJ2aXNpdG9yX2lkIjoiMzIyMjExOTc1NDY4MTM3MTQzMyIsInJlZ2lvbl9lZGdlIjoiaWFkIiwicmVnaW9uX3JlbmRlciI6ImlhZCJ9
visitor-hmac7a0623c2017e5323049d0763c0aad1f2302edeee707fc6d6e9bf64c5bc8af716
hovercard-subject-tagrepository:189280115
github-keyboard-shortcutsrepository,copilot
google-site-verificationApib7-x98H0j5cPqHWwSMm6dNU4GmODRoqxLiDzdx9I
octolytics-urlhttps://collector.github.com/github/collect
analytics-location//
fb:app_id1401488693436528
apple-itunes-appapp-id=1477376905, app-argument=https://github.com/jlboat/NextflowScripts
twitter:imagehttps://opengraph.githubassets.com/2e1dd17434dd336fd77186babdb34a276e3a830a781aba8ce8f0f862405b1dd3/jlboat/NextflowScripts
twitter:cardsummary_large_image
og:imagehttps://opengraph.githubassets.com/2e1dd17434dd336fd77186babdb34a276e3a830a781aba8ce8f0f862405b1dd3/jlboat/NextflowScripts
og:image:altMisc. Nextflow scripts. Contribute to jlboat/NextflowScripts development by creating an account on GitHub.
og:image:width1200
og:image:height600
og:site_nameGitHub
og:typeobject
hostnamegithub.com
expected-hostnamegithub.com
Nonec0818105fa276287e9369cfdefa0a0fa7953719791ceff9b94d69623c0a4fe8a
turbo-cache-controlno-preview
go-importgithub.com/jlboat/NextflowScripts git https://github.com/jlboat/NextflowScripts.git
octolytics-dimension-user_id21690977
octolytics-dimension-user_loginjlboat
octolytics-dimension-repository_id189280115
octolytics-dimension-repository_nwojlboat/NextflowScripts
octolytics-dimension-repository_publictrue
octolytics-dimension-repository_is_forkfalse
octolytics-dimension-repository_network_root_id189280115
octolytics-dimension-repository_network_root_nwojlboat/NextflowScripts
turbo-body-classeslogged-out env-production page-responsive
disable-turbofalse
browser-stats-urlhttps://api.github.com/_private/browser/stats
browser-errors-urlhttps://api.github.com/_private/browser/errors
releasea95a17cc440c14d4fcddc0641bc1136fa8d908f0
ui-targetfull
theme-color#1e2327
color-schemelight dark

Links:

Skip to contenthttps://patch-diff.githubusercontent.com/jlboat/NextflowScripts#start-of-content
https://patch-diff.githubusercontent.com/
Sign in https://patch-diff.githubusercontent.com/login?return_to=https%3A%2F%2Fgithub.com%2Fjlboat%2FNextflowScripts
GitHub CopilotWrite better code with AIhttps://github.com/features/copilot
GitHub SparkBuild and deploy intelligent appshttps://github.com/features/spark
GitHub ModelsManage and compare promptshttps://github.com/features/models
MCP RegistryNewIntegrate external toolshttps://github.com/mcp
ActionsAutomate any workflowhttps://github.com/features/actions
CodespacesInstant dev environmentshttps://github.com/features/codespaces
IssuesPlan and track workhttps://github.com/features/issues
Code ReviewManage code changeshttps://github.com/features/code-review
GitHub Advanced SecurityFind and fix vulnerabilitieshttps://github.com/security/advanced-security
Code securitySecure your code as you buildhttps://github.com/security/advanced-security/code-security
Secret protectionStop leaks before they starthttps://github.com/security/advanced-security/secret-protection
Why GitHubhttps://github.com/why-github
Documentationhttps://docs.github.com
Bloghttps://github.blog
Changeloghttps://github.blog/changelog
Marketplacehttps://github.com/marketplace
View all featureshttps://github.com/features
Enterpriseshttps://github.com/enterprise
Small and medium teamshttps://github.com/team
Startupshttps://github.com/enterprise/startups
Nonprofitshttps://github.com/solutions/industry/nonprofits
App Modernizationhttps://github.com/solutions/use-case/app-modernization
DevSecOpshttps://github.com/solutions/use-case/devsecops
DevOpshttps://github.com/solutions/use-case/devops
CI/CDhttps://github.com/solutions/use-case/ci-cd
View all use caseshttps://github.com/solutions/use-case
Healthcarehttps://github.com/solutions/industry/healthcare
Financial serviceshttps://github.com/solutions/industry/financial-services
Manufacturinghttps://github.com/solutions/industry/manufacturing
Governmenthttps://github.com/solutions/industry/government
View all industrieshttps://github.com/solutions/industry
View all solutionshttps://github.com/solutions
AIhttps://github.com/resources/articles?topic=ai
Software Developmenthttps://github.com/resources/articles?topic=software-development
DevOpshttps://github.com/resources/articles?topic=devops
Securityhttps://github.com/resources/articles?topic=security
View all topicshttps://github.com/resources/articles
Customer storieshttps://github.com/customer-stories
Events & webinarshttps://github.com/resources/events
Ebooks & reportshttps://github.com/resources/whitepapers
Business insightshttps://github.com/solutions/executive-insights
GitHub Skillshttps://skills.github.com
Documentationhttps://docs.github.com
Customer supporthttps://support.github.com
Community forumhttps://github.com/orgs/community/discussions
Trust centerhttps://github.com/trust-center
Partnershttps://github.com/partners
GitHub SponsorsFund open source developershttps://github.com/sponsors
Security Labhttps://securitylab.github.com
Maintainer Communityhttps://maintainers.github.com
Acceleratorhttps://github.com/accelerator
Archive Programhttps://archiveprogram.github.com
Topicshttps://github.com/topics
Trendinghttps://github.com/trending
Collectionshttps://github.com/collections
Enterprise platformAI-powered developer platformhttps://github.com/enterprise
GitHub Advanced SecurityEnterprise-grade security featureshttps://github.com/security/advanced-security
Copilot for BusinessEnterprise-grade AI featureshttps://github.com/features/copilot/copilot-business
Premium SupportEnterprise-grade 24/7 supporthttps://github.com/premium-support
Pricinghttps://github.com/pricing
Search syntax tipshttps://docs.github.com/search-github/github-code-search/understanding-github-code-search-syntax
documentationhttps://docs.github.com/search-github/github-code-search/understanding-github-code-search-syntax
Sign in https://patch-diff.githubusercontent.com/login?return_to=https%3A%2F%2Fgithub.com%2Fjlboat%2FNextflowScripts
Sign up https://patch-diff.githubusercontent.com/signup?ref_cta=Sign+up&ref_loc=header+logged+out&ref_page=%2F%3Cuser-name%3E%2F%3Crepo-name%3E&source=header-repo&source_repo=jlboat%2FNextflowScripts
Reloadhttps://patch-diff.githubusercontent.com/jlboat/NextflowScripts
Reloadhttps://patch-diff.githubusercontent.com/jlboat/NextflowScripts
Reloadhttps://patch-diff.githubusercontent.com/jlboat/NextflowScripts
jlboat https://patch-diff.githubusercontent.com/jlboat
NextflowScriptshttps://patch-diff.githubusercontent.com/jlboat/NextflowScripts
Notifications https://patch-diff.githubusercontent.com/login?return_to=%2Fjlboat%2FNextflowScripts
Fork 0 https://patch-diff.githubusercontent.com/login?return_to=%2Fjlboat%2FNextflowScripts
Star 1 https://patch-diff.githubusercontent.com/login?return_to=%2Fjlboat%2FNextflowScripts
1 star https://patch-diff.githubusercontent.com/jlboat/NextflowScripts/stargazers
0 forks https://patch-diff.githubusercontent.com/jlboat/NextflowScripts/forks
Branches https://patch-diff.githubusercontent.com/jlboat/NextflowScripts/branches
Tags https://patch-diff.githubusercontent.com/jlboat/NextflowScripts/tags
Activity https://patch-diff.githubusercontent.com/jlboat/NextflowScripts/activity
Star https://patch-diff.githubusercontent.com/login?return_to=%2Fjlboat%2FNextflowScripts
Notifications https://patch-diff.githubusercontent.com/login?return_to=%2Fjlboat%2FNextflowScripts
Code https://patch-diff.githubusercontent.com/jlboat/NextflowScripts
Issues 0 https://patch-diff.githubusercontent.com/jlboat/NextflowScripts/issues
Pull requests 0 https://patch-diff.githubusercontent.com/jlboat/NextflowScripts/pulls
Actions https://patch-diff.githubusercontent.com/jlboat/NextflowScripts/actions
Projects 0 https://patch-diff.githubusercontent.com/jlboat/NextflowScripts/projects
Security 0 https://patch-diff.githubusercontent.com/jlboat/NextflowScripts/security
Insights https://patch-diff.githubusercontent.com/jlboat/NextflowScripts/pulse
Code https://patch-diff.githubusercontent.com/jlboat/NextflowScripts
Issues https://patch-diff.githubusercontent.com/jlboat/NextflowScripts/issues
Pull requests https://patch-diff.githubusercontent.com/jlboat/NextflowScripts/pulls
Actions https://patch-diff.githubusercontent.com/jlboat/NextflowScripts/actions
Projects https://patch-diff.githubusercontent.com/jlboat/NextflowScripts/projects
Security https://patch-diff.githubusercontent.com/jlboat/NextflowScripts/security
Insights https://patch-diff.githubusercontent.com/jlboat/NextflowScripts/pulse
Brancheshttps://patch-diff.githubusercontent.com/jlboat/NextflowScripts/branches
Tagshttps://patch-diff.githubusercontent.com/jlboat/NextflowScripts/tags
https://patch-diff.githubusercontent.com/jlboat/NextflowScripts/branches
https://patch-diff.githubusercontent.com/jlboat/NextflowScripts/tags
2 Commitshttps://patch-diff.githubusercontent.com/jlboat/NextflowScripts/commits/master/
https://patch-diff.githubusercontent.com/jlboat/NextflowScripts/commits/master/
README.mdhttps://patch-diff.githubusercontent.com/jlboat/NextflowScripts/blob/master/README.md
README.mdhttps://patch-diff.githubusercontent.com/jlboat/NextflowScripts/blob/master/README.md
config.confhttps://patch-diff.githubusercontent.com/jlboat/NextflowScripts/blob/master/config.conf
config.confhttps://patch-diff.githubusercontent.com/jlboat/NextflowScripts/blob/master/config.conf
fastp_fastqc_bwa.nfhttps://patch-diff.githubusercontent.com/jlboat/NextflowScripts/blob/master/fastp_fastqc_bwa.nf
fastp_fastqc_bwa.nfhttps://patch-diff.githubusercontent.com/jlboat/NextflowScripts/blob/master/fastp_fastqc_bwa.nf
fastp_fastqc_single-end.nfhttps://patch-diff.githubusercontent.com/jlboat/NextflowScripts/blob/master/fastp_fastqc_single-end.nf
fastp_fastqc_single-end.nfhttps://patch-diff.githubusercontent.com/jlboat/NextflowScripts/blob/master/fastp_fastqc_single-end.nf
last.nfhttps://patch-diff.githubusercontent.com/jlboat/NextflowScripts/blob/master/last.nf
last.nfhttps://patch-diff.githubusercontent.com/jlboat/NextflowScripts/blob/master/last.nf
mail.nfhttps://patch-diff.githubusercontent.com/jlboat/NextflowScripts/blob/master/mail.nf
mail.nfhttps://patch-diff.githubusercontent.com/jlboat/NextflowScripts/blob/master/mail.nf
ncbi-blast+.nfhttps://patch-diff.githubusercontent.com/jlboat/NextflowScripts/blob/master/ncbi-blast%2B.nf
ncbi-blast+.nfhttps://patch-diff.githubusercontent.com/jlboat/NextflowScripts/blob/master/ncbi-blast%2B.nf
orthofinder.nfhttps://patch-diff.githubusercontent.com/jlboat/NextflowScripts/blob/master/orthofinder.nf
orthofinder.nfhttps://patch-diff.githubusercontent.com/jlboat/NextflowScripts/blob/master/orthofinder.nf
parameters.nfhttps://patch-diff.githubusercontent.com/jlboat/NextflowScripts/blob/master/parameters.nf
parameters.nfhttps://patch-diff.githubusercontent.com/jlboat/NextflowScripts/blob/master/parameters.nf
run_blast_nf.bashhttps://patch-diff.githubusercontent.com/jlboat/NextflowScripts/blob/master/run_blast_nf.bash
run_blast_nf.bashhttps://patch-diff.githubusercontent.com/jlboat/NextflowScripts/blob/master/run_blast_nf.bash
run_nextflow.bashhttps://patch-diff.githubusercontent.com/jlboat/NextflowScripts/blob/master/run_nextflow.bash
run_nextflow.bashhttps://patch-diff.githubusercontent.com/jlboat/NextflowScripts/blob/master/run_nextflow.bash
star_index.nfhttps://patch-diff.githubusercontent.com/jlboat/NextflowScripts/blob/master/star_index.nf
star_index.nfhttps://patch-diff.githubusercontent.com/jlboat/NextflowScripts/blob/master/star_index.nf
trimmomatic_fastqc_star_stringtie_mouse_paired-end.nfhttps://patch-diff.githubusercontent.com/jlboat/NextflowScripts/blob/master/trimmomatic_fastqc_star_stringtie_mouse_paired-end.nf
trimmomatic_fastqc_star_stringtie_mouse_paired-end.nfhttps://patch-diff.githubusercontent.com/jlboat/NextflowScripts/blob/master/trimmomatic_fastqc_star_stringtie_mouse_paired-end.nf
trimmomatic_fastqc_star_stringtie_single-end.nfhttps://patch-diff.githubusercontent.com/jlboat/NextflowScripts/blob/master/trimmomatic_fastqc_star_stringtie_single-end.nf
trimmomatic_fastqc_star_stringtie_single-end.nfhttps://patch-diff.githubusercontent.com/jlboat/NextflowScripts/blob/master/trimmomatic_fastqc_star_stringtie_single-end.nf
trimmomatic_fastqc_star_stringtie_sorghum_paired-end.nfhttps://patch-diff.githubusercontent.com/jlboat/NextflowScripts/blob/master/trimmomatic_fastqc_star_stringtie_sorghum_paired-end.nf
trimmomatic_fastqc_star_stringtie_sorghum_paired-end.nfhttps://patch-diff.githubusercontent.com/jlboat/NextflowScripts/blob/master/trimmomatic_fastqc_star_stringtie_sorghum_paired-end.nf
READMEhttps://patch-diff.githubusercontent.com/jlboat/NextflowScripts
https://patch-diff.githubusercontent.com/jlboat/NextflowScripts#nextflowscripts
bioinformatics https://patch-diff.githubusercontent.com/topics/bioinformatics
nextflow https://patch-diff.githubusercontent.com/topics/nextflow
bioinformatics-pipeline https://patch-diff.githubusercontent.com/topics/bioinformatics-pipeline
nextflow-pipeline https://patch-diff.githubusercontent.com/topics/nextflow-pipeline
Readme https://patch-diff.githubusercontent.com/jlboat/NextflowScripts#readme-ov-file
Please reload this pagehttps://patch-diff.githubusercontent.com/jlboat/NextflowScripts
Activityhttps://patch-diff.githubusercontent.com/jlboat/NextflowScripts/activity
1 starhttps://patch-diff.githubusercontent.com/jlboat/NextflowScripts/stargazers
0 watchinghttps://patch-diff.githubusercontent.com/jlboat/NextflowScripts/watchers
0 forkshttps://patch-diff.githubusercontent.com/jlboat/NextflowScripts/forks
Report repository https://patch-diff.githubusercontent.com/contact/report-content?content_url=https%3A%2F%2Fgithub.com%2Fjlboat%2FNextflowScripts&report=jlboat+%28user%29
Releaseshttps://patch-diff.githubusercontent.com/jlboat/NextflowScripts/releases
Packages 0https://patch-diff.githubusercontent.com/users/jlboat/packages?repo_name=NextflowScripts
Nextflow 97.8% https://patch-diff.githubusercontent.com/jlboat/NextflowScripts/search?l=nextflow
Shell 2.2% https://patch-diff.githubusercontent.com/jlboat/NextflowScripts/search?l=shell
https://github.com
Termshttps://docs.github.com/site-policy/github-terms/github-terms-of-service
Privacyhttps://docs.github.com/site-policy/privacy-policies/github-privacy-statement
Securityhttps://github.com/security
Statushttps://www.githubstatus.com/
Communityhttps://github.community/
Docshttps://docs.github.com/
Contacthttps://support.github.com?tags=dotcom-footer

Viewport: width=device-width


URLs of crawlers that visited me.