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Title: GitHub - gpertea/stringtie: Transcript assembly and quantification for RNA-Seq

Open Graph Title: GitHub - gpertea/stringtie: Transcript assembly and quantification for RNA-Seq

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Description: Transcript assembly and quantification for RNA-Seq - gpertea/stringtie

Open Graph Description: Transcript assembly and quantification for RNA-Seq - gpertea/stringtie

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StringTie 3 improves total-RNA assembly by resolving nascent and mature transcripts.	https://www.biorxiv.org/content/10.1101/2025.05.21.655404v1
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Improved transcriptome assembly using a hybrid of long and short reads with StringTie	https://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1009730
Transcriptome assembly from long-read RNA-seq alignments with StringTie2	https://genomebiology.biomedcentral.com/articles/10.1186/s13059-019-1910-1
Transcript-level expression analysis of RNA-seq experiments with HISAT, StringTie and Ballgown	http://www.nature.com/nprot/journal/v11/n9/full/nprot.2016.095.html
StringTie enables improved reconstruction of a transcriptome from RNA-seq reads	http://www.nature.com/nbt/journal/vaop/ncurrent/full/nbt.3122.html
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