René's URL Explorer Experiment


Title: GitHub - fvalle1/topicTCGA: Notebooks for "A topic model analysis of TCGA transcriptomic data of breast and lung cancer"

Open Graph Title: GitHub - fvalle1/topicTCGA: Notebooks for "A topic model analysis of TCGA transcriptomic data of breast and lung cancer"

X Title: GitHub - fvalle1/topicTCGA: Notebooks for "A topic model analysis of TCGA transcriptomic data of breast and lung cancer"

Description: Notebooks for "A topic model analysis of TCGA transcriptomic data of breast and lung cancer" - fvalle1/topicTCGA

Open Graph Description: Notebooks for "A topic model analysis of TCGA transcriptomic data of breast and lung cancer" - fvalle1/topicTCGA

X Description: Notebooks for "A topic model analysis of TCGA transcriptomic data of breast and lung cancer" - fvalle1/topicTCGA

Opengraph URL: https://github.com/fvalle1/topicTCGA

X: @github

direct link

Domain: patch-diff.githubusercontent.com

route-pattern/:user_id/:repository
route-controllerfiles
route-actiondisambiguate
fetch-noncev2:73c37b9f-8d35-9751-5ec5-3a1e7d4982f5
current-catalog-service-hashf3abb0cc802f3d7b95fc8762b94bdcb13bf39634c40c357301c4aa1d67a256fb
request-idD3E4:160060:282CB5:362656:698CB1D6
html-safe-noncea04b37f4a67da9fd21c4ca88b3c9636c6c2760671a825bf95126cf37df69f8ee
visitor-payloadeyJyZWZlcnJlciI6IiIsInJlcXVlc3RfaWQiOiJEM0U0OjE2MDA2MDoyODJDQjU6MzYyNjU2OjY5OENCMUQ2IiwidmlzaXRvcl9pZCI6IjgzNzQ5OTkzODA3MTM1ODMwNjIiLCJyZWdpb25fZWRnZSI6ImlhZCIsInJlZ2lvbl9yZW5kZXIiOiJpYWQifQ==
visitor-hmac80ca51baefdd6bfb346dd245eb11c7f6a6578541dad644190bac374b3eb3768b
hovercard-subject-tagrepository:266068136
github-keyboard-shortcutsrepository,copilot
google-site-verificationApib7-x98H0j5cPqHWwSMm6dNU4GmODRoqxLiDzdx9I
octolytics-urlhttps://collector.github.com/github/collect
analytics-location//
fb:app_id1401488693436528
apple-itunes-appapp-id=1477376905, app-argument=https://github.com/fvalle1/topicTCGA
twitter:imagehttps://opengraph.githubassets.com/0e546cbdcafbe3aa3c3e9e79465955c3ca5c8a1313ecfb73123502afecde28bb/fvalle1/topicTCGA
twitter:cardsummary_large_image
og:imagehttps://opengraph.githubassets.com/0e546cbdcafbe3aa3c3e9e79465955c3ca5c8a1313ecfb73123502afecde28bb/fvalle1/topicTCGA
og:image:altNotebooks for "A topic model analysis of TCGA transcriptomic data of breast and lung cancer" - fvalle1/topicTCGA
og:image:width1200
og:image:height600
og:site_nameGitHub
og:typeobject
hostnamegithub.com
expected-hostnamegithub.com
None640eeb7b6ff4d8d106235d228c0c286e82592d4d2403227b5b2b4fc5832297a4
turbo-cache-controlno-preview
go-importgithub.com/fvalle1/topicTCGA git https://github.com/fvalle1/topicTCGA.git
octolytics-dimension-user_id7323644
octolytics-dimension-user_loginfvalle1
octolytics-dimension-repository_id266068136
octolytics-dimension-repository_nwofvalle1/topicTCGA
octolytics-dimension-repository_publictrue
octolytics-dimension-repository_is_forkfalse
octolytics-dimension-repository_network_root_id266068136
octolytics-dimension-repository_network_root_nwofvalle1/topicTCGA
turbo-body-classeslogged-out env-production page-responsive
disable-turbofalse
browser-stats-urlhttps://api.github.com/_private/browser/stats
browser-errors-urlhttps://api.github.com/_private/browser/errors
release3d444f0a47beeeac94cddbb51c91ab408befe8d4
ui-targetfull
theme-color#1e2327
color-schemelight dark

Links:

Skip to contenthttps://patch-diff.githubusercontent.com/fvalle1/topicTCGA#start-of-content
https://patch-diff.githubusercontent.com/
Sign in https://patch-diff.githubusercontent.com/login?return_to=https%3A%2F%2Fgithub.com%2Ffvalle1%2FtopicTCGA
GitHub CopilotWrite better code with AIhttps://github.com/features/copilot
GitHub SparkBuild and deploy intelligent appshttps://github.com/features/spark
GitHub ModelsManage and compare promptshttps://github.com/features/models
MCP RegistryNewIntegrate external toolshttps://github.com/mcp
ActionsAutomate any workflowhttps://github.com/features/actions
CodespacesInstant dev environmentshttps://github.com/features/codespaces
IssuesPlan and track workhttps://github.com/features/issues
Code ReviewManage code changeshttps://github.com/features/code-review
GitHub Advanced SecurityFind and fix vulnerabilitieshttps://github.com/security/advanced-security
Code securitySecure your code as you buildhttps://github.com/security/advanced-security/code-security
Secret protectionStop leaks before they starthttps://github.com/security/advanced-security/secret-protection
Why GitHubhttps://github.com/why-github
Documentationhttps://docs.github.com
Bloghttps://github.blog
Changeloghttps://github.blog/changelog
Marketplacehttps://github.com/marketplace
View all featureshttps://github.com/features
Enterpriseshttps://github.com/enterprise
Small and medium teamshttps://github.com/team
Startupshttps://github.com/enterprise/startups
Nonprofitshttps://github.com/solutions/industry/nonprofits
App Modernizationhttps://github.com/solutions/use-case/app-modernization
DevSecOpshttps://github.com/solutions/use-case/devsecops
DevOpshttps://github.com/solutions/use-case/devops
CI/CDhttps://github.com/solutions/use-case/ci-cd
View all use caseshttps://github.com/solutions/use-case
Healthcarehttps://github.com/solutions/industry/healthcare
Financial serviceshttps://github.com/solutions/industry/financial-services
Manufacturinghttps://github.com/solutions/industry/manufacturing
Governmenthttps://github.com/solutions/industry/government
View all industrieshttps://github.com/solutions/industry
View all solutionshttps://github.com/solutions
AIhttps://github.com/resources/articles?topic=ai
Software Developmenthttps://github.com/resources/articles?topic=software-development
DevOpshttps://github.com/resources/articles?topic=devops
Securityhttps://github.com/resources/articles?topic=security
View all topicshttps://github.com/resources/articles
Customer storieshttps://github.com/customer-stories
Events & webinarshttps://github.com/resources/events
Ebooks & reportshttps://github.com/resources/whitepapers
Business insightshttps://github.com/solutions/executive-insights
GitHub Skillshttps://skills.github.com
Documentationhttps://docs.github.com
Customer supporthttps://support.github.com
Community forumhttps://github.com/orgs/community/discussions
Trust centerhttps://github.com/trust-center
Partnershttps://github.com/partners
GitHub SponsorsFund open source developershttps://github.com/sponsors
Security Labhttps://securitylab.github.com
Maintainer Communityhttps://maintainers.github.com
Acceleratorhttps://github.com/accelerator
Archive Programhttps://archiveprogram.github.com
Topicshttps://github.com/topics
Trendinghttps://github.com/trending
Collectionshttps://github.com/collections
Enterprise platformAI-powered developer platformhttps://github.com/enterprise
GitHub Advanced SecurityEnterprise-grade security featureshttps://github.com/security/advanced-security
Copilot for BusinessEnterprise-grade AI featureshttps://github.com/features/copilot/copilot-business
Premium SupportEnterprise-grade 24/7 supporthttps://github.com/premium-support
Pricinghttps://github.com/pricing
Search syntax tipshttps://docs.github.com/search-github/github-code-search/understanding-github-code-search-syntax
documentationhttps://docs.github.com/search-github/github-code-search/understanding-github-code-search-syntax
Sign in https://patch-diff.githubusercontent.com/login?return_to=https%3A%2F%2Fgithub.com%2Ffvalle1%2FtopicTCGA
Sign up https://patch-diff.githubusercontent.com/signup?ref_cta=Sign+up&ref_loc=header+logged+out&ref_page=%2F%3Cuser-name%3E%2F%3Crepo-name%3E&source=header-repo&source_repo=fvalle1%2FtopicTCGA
Reloadhttps://patch-diff.githubusercontent.com/fvalle1/topicTCGA
Reloadhttps://patch-diff.githubusercontent.com/fvalle1/topicTCGA
Reloadhttps://patch-diff.githubusercontent.com/fvalle1/topicTCGA
fvalle1 https://patch-diff.githubusercontent.com/fvalle1
topicTCGAhttps://patch-diff.githubusercontent.com/fvalle1/topicTCGA
Notifications https://patch-diff.githubusercontent.com/login?return_to=%2Ffvalle1%2FtopicTCGA
Fork 1 https://patch-diff.githubusercontent.com/login?return_to=%2Ffvalle1%2FtopicTCGA
Star 0 https://patch-diff.githubusercontent.com/login?return_to=%2Ffvalle1%2FtopicTCGA
GPL-3.0 license https://patch-diff.githubusercontent.com/fvalle1/topicTCGA/blob/master/LICENSE
0 stars https://patch-diff.githubusercontent.com/fvalle1/topicTCGA/stargazers
1 fork https://patch-diff.githubusercontent.com/fvalle1/topicTCGA/forks
Branches https://patch-diff.githubusercontent.com/fvalle1/topicTCGA/branches
Tags https://patch-diff.githubusercontent.com/fvalle1/topicTCGA/tags
Activity https://patch-diff.githubusercontent.com/fvalle1/topicTCGA/activity
Star https://patch-diff.githubusercontent.com/login?return_to=%2Ffvalle1%2FtopicTCGA
Notifications https://patch-diff.githubusercontent.com/login?return_to=%2Ffvalle1%2FtopicTCGA
Code https://patch-diff.githubusercontent.com/fvalle1/topicTCGA
Issues 1 https://patch-diff.githubusercontent.com/fvalle1/topicTCGA/issues
Pull requests 0 https://patch-diff.githubusercontent.com/fvalle1/topicTCGA/pulls
Actions https://patch-diff.githubusercontent.com/fvalle1/topicTCGA/actions
Projects 0 https://patch-diff.githubusercontent.com/fvalle1/topicTCGA/projects
Security 0 https://patch-diff.githubusercontent.com/fvalle1/topicTCGA/security
Insights https://patch-diff.githubusercontent.com/fvalle1/topicTCGA/pulse
Code https://patch-diff.githubusercontent.com/fvalle1/topicTCGA
Issues https://patch-diff.githubusercontent.com/fvalle1/topicTCGA/issues
Pull requests https://patch-diff.githubusercontent.com/fvalle1/topicTCGA/pulls
Actions https://patch-diff.githubusercontent.com/fvalle1/topicTCGA/actions
Projects https://patch-diff.githubusercontent.com/fvalle1/topicTCGA/projects
Security https://patch-diff.githubusercontent.com/fvalle1/topicTCGA/security
Insights https://patch-diff.githubusercontent.com/fvalle1/topicTCGA/pulse
Brancheshttps://patch-diff.githubusercontent.com/fvalle1/topicTCGA/branches
Tagshttps://patch-diff.githubusercontent.com/fvalle1/topicTCGA/tags
https://patch-diff.githubusercontent.com/fvalle1/topicTCGA/branches
https://patch-diff.githubusercontent.com/fvalle1/topicTCGA/tags
154 Commitshttps://patch-diff.githubusercontent.com/fvalle1/topicTCGA/commits/master/
https://patch-diff.githubusercontent.com/fvalle1/topicTCGA/commits/master/
.dvchttps://patch-diff.githubusercontent.com/fvalle1/topicTCGA/tree/master/.dvc
.dvchttps://patch-diff.githubusercontent.com/fvalle1/topicTCGA/tree/master/.dvc
.githubhttps://patch-diff.githubusercontent.com/fvalle1/topicTCGA/tree/master/.github
.githubhttps://patch-diff.githubusercontent.com/fvalle1/topicTCGA/tree/master/.github
breasthttps://patch-diff.githubusercontent.com/fvalle1/topicTCGA/tree/master/breast
breasthttps://patch-diff.githubusercontent.com/fvalle1/topicTCGA/tree/master/breast
lunghttps://patch-diff.githubusercontent.com/fvalle1/topicTCGA/tree/master/lung
lunghttps://patch-diff.githubusercontent.com/fvalle1/topicTCGA/tree/master/lung
tree_plotter @ b3a2f7chttps://patch-diff.githubusercontent.com/fvalle1/tree_plotter/tree/b3a2f7ce89d5ab928d8a8e6627c5eb158559cf85
tree_plotter @ b3a2f7chttps://patch-diff.githubusercontent.com/fvalle1/tree_plotter/tree/b3a2f7ce89d5ab928d8a8e6627c5eb158559cf85
unified_lunghttps://patch-diff.githubusercontent.com/fvalle1/topicTCGA/tree/master/unified_lung
unified_lunghttps://patch-diff.githubusercontent.com/fvalle1/topicTCGA/tree/master/unified_lung
.dockerignorehttps://patch-diff.githubusercontent.com/fvalle1/topicTCGA/blob/master/.dockerignore
.dockerignorehttps://patch-diff.githubusercontent.com/fvalle1/topicTCGA/blob/master/.dockerignore
.dvcignorehttps://patch-diff.githubusercontent.com/fvalle1/topicTCGA/blob/master/.dvcignore
.dvcignorehttps://patch-diff.githubusercontent.com/fvalle1/topicTCGA/blob/master/.dvcignore
.gitignorehttps://patch-diff.githubusercontent.com/fvalle1/topicTCGA/blob/master/.gitignore
.gitignorehttps://patch-diff.githubusercontent.com/fvalle1/topicTCGA/blob/master/.gitignore
.gitmoduleshttps://patch-diff.githubusercontent.com/fvalle1/topicTCGA/blob/master/.gitmodules
.gitmoduleshttps://patch-diff.githubusercontent.com/fvalle1/topicTCGA/blob/master/.gitmodules
CITATION.cffhttps://patch-diff.githubusercontent.com/fvalle1/topicTCGA/blob/master/CITATION.cff
CITATION.cffhttps://patch-diff.githubusercontent.com/fvalle1/topicTCGA/blob/master/CITATION.cff
Dockerfilehttps://patch-diff.githubusercontent.com/fvalle1/topicTCGA/blob/master/Dockerfile
Dockerfilehttps://patch-diff.githubusercontent.com/fvalle1/topicTCGA/blob/master/Dockerfile
LICENSEhttps://patch-diff.githubusercontent.com/fvalle1/topicTCGA/blob/master/LICENSE
LICENSEhttps://patch-diff.githubusercontent.com/fvalle1/topicTCGA/blob/master/LICENSE
README.mdhttps://patch-diff.githubusercontent.com/fvalle1/topicTCGA/blob/master/README.md
README.mdhttps://patch-diff.githubusercontent.com/fvalle1/topicTCGA/blob/master/README.md
TCGA_GetManifest.ipynbhttps://patch-diff.githubusercontent.com/fvalle1/topicTCGA/blob/master/TCGA_GetManifest.ipynb
TCGA_GetManifest.ipynbhttps://patch-diff.githubusercontent.com/fvalle1/topicTCGA/blob/master/TCGA_GetManifest.ipynb
TCGA_biolinks.csvhttps://patch-diff.githubusercontent.com/fvalle1/topicTCGA/blob/master/TCGA_biolinks.csv
TCGA_biolinks.csvhttps://patch-diff.githubusercontent.com/fvalle1/topicTCGA/blob/master/TCGA_biolinks.csv
T_VsAll.ipynbhttps://patch-diff.githubusercontent.com/fvalle1/topicTCGA/blob/master/T_VsAll.ipynb
T_VsAll.ipynbhttps://patch-diff.githubusercontent.com/fvalle1/topicTCGA/blob/master/T_VsAll.ipynb
Table_Creation.ipynbhttps://patch-diff.githubusercontent.com/fvalle1/topicTCGA/blob/master/Table_Creation.ipynb
Table_Creation.ipynbhttps://patch-diff.githubusercontent.com/fvalle1/topicTCGA/blob/master/Table_Creation.ipynb
WGCNA.ipynbhttps://patch-diff.githubusercontent.com/fvalle1/topicTCGA/blob/master/WGCNA.ipynb
WGCNA.ipynbhttps://patch-diff.githubusercontent.com/fvalle1/topicTCGA/blob/master/WGCNA.ipynb
docker-compose.ymlhttps://patch-diff.githubusercontent.com/fvalle1/topicTCGA/blob/master/docker-compose.yml
docker-compose.ymlhttps://patch-diff.githubusercontent.com/fvalle1/topicTCGA/blob/master/docker-compose.yml
hSBM_postprocess.ipynbhttps://patch-diff.githubusercontent.com/fvalle1/topicTCGA/blob/master/hSBM_postprocess.ipynb
hSBM_postprocess.ipynbhttps://patch-diff.githubusercontent.com/fvalle1/topicTCGA/blob/master/hSBM_postprocess.ipynb
hierarchical_lda_wgcna.ipynbhttps://patch-diff.githubusercontent.com/fvalle1/topicTCGA/blob/master/hierarchical_lda_wgcna.ipynb
hierarchical_lda_wgcna.ipynbhttps://patch-diff.githubusercontent.com/fvalle1/topicTCGA/blob/master/hierarchical_lda_wgcna.ipynb
requirements.txthttps://patch-diff.githubusercontent.com/fvalle1/topicTCGA/blob/master/requirements.txt
requirements.txthttps://patch-diff.githubusercontent.com/fvalle1/topicTCGA/blob/master/requirements.txt
run_graph.ipynbhttps://patch-diff.githubusercontent.com/fvalle1/topicTCGA/blob/master/run_graph.ipynb
run_graph.ipynbhttps://patch-diff.githubusercontent.com/fvalle1/topicTCGA/blob/master/run_graph.ipynb
survival.pyhttps://patch-diff.githubusercontent.com/fvalle1/topicTCGA/blob/master/survival.py
survival.pyhttps://patch-diff.githubusercontent.com/fvalle1/topicTCGA/blob/master/survival.py
READMEhttps://patch-diff.githubusercontent.com/fvalle1/topicTCGA
GPL-3.0 licensehttps://patch-diff.githubusercontent.com/fvalle1/topicTCGA
https://github.com/fvalle1/cancers/workflows/Docker%20Image%20CI/badge.svg
https://doi.org/10.3390/cancers12123799
https://patch-diff.githubusercontent.com/fvalle1/topicTCGA#a-topic-model-analysis-of-tcga
A Topic Modeling Analysis of TCGA Breast and Lung Cancer Transcriptomic Datahttps://www.mdpi.com/2072-6694/12/12/3799
https://patch-diff.githubusercontent.com/fvalle1/topicTCGA#analyse-results
hSBM_postprocess.ipynbhttps://patch-diff.githubusercontent.com/fvalle1/topicTCGA/blob/master/hSBM_postprocess.ipynb
https://patch-diff.githubusercontent.com/fvalle1/topicTCGA#breast
breasthttps://patch-diff.githubusercontent.com/fvalle1/topicTCGA/blob/master/breast
https://patch-diff.githubusercontent.com/fvalle1/topicTCGA#lung
lunghttps://patch-diff.githubusercontent.com/fvalle1/topicTCGA/blob/master/lung
https://patch-diff.githubusercontent.com/fvalle1/topicTCGA#unified-lung
https://patch-diff.githubusercontent.com/fvalle1/topicTCGA#tree-plotter
https://patch-diff.githubusercontent.com/fvalle1/topicTCGA#run
localhosthttp://localhost:8888
https://patch-diff.githubusercontent.com/fvalle1/topicTCGA#hsbm_topicmodel
run_graph.ipynbhttps://patch-diff.githubusercontent.com/fvalle1/topicTCGA/blob/master/run_graph.ipynb
https://patch-diff.githubusercontent.com/fvalle1/topicTCGA#data
DataVersionControlhttps://dvc.org
https://patch-diff.githubusercontent.com/fvalle1/topicTCGA#license
LICENSEhttps://patch-diff.githubusercontent.com/fvalle1/topicTCGA/blob/master/LICENSE
topic-modeling https://patch-diff.githubusercontent.com/topics/topic-modeling
stochastic-block-model https://patch-diff.githubusercontent.com/topics/stochastic-block-model
tcga-data https://patch-diff.githubusercontent.com/topics/tcga-data
lifelines https://patch-diff.githubusercontent.com/topics/lifelines
cancer-machine-learning https://patch-diff.githubusercontent.com/topics/cancer-machine-learning
topic-model-analysis https://patch-diff.githubusercontent.com/topics/topic-model-analysis
Readme https://patch-diff.githubusercontent.com/fvalle1/topicTCGA#readme-ov-file
GPL-3.0 license https://patch-diff.githubusercontent.com/fvalle1/topicTCGA#GPL-3.0-1-ov-file
Please reload this pagehttps://patch-diff.githubusercontent.com/fvalle1/topicTCGA
Activityhttps://patch-diff.githubusercontent.com/fvalle1/topicTCGA/activity
0 starshttps://patch-diff.githubusercontent.com/fvalle1/topicTCGA/stargazers
1 watchinghttps://patch-diff.githubusercontent.com/fvalle1/topicTCGA/watchers
1 forkhttps://patch-diff.githubusercontent.com/fvalle1/topicTCGA/forks
Report repository https://patch-diff.githubusercontent.com/contact/report-content?content_url=https%3A%2F%2Fgithub.com%2Ffvalle1%2FtopicTCGA&report=fvalle1+%28user%29
Releases 2https://patch-diff.githubusercontent.com/fvalle1/topicTCGA/releases
v2 resubmit Latest Dec 7, 2020 https://patch-diff.githubusercontent.com/fvalle1/topicTCGA/releases/tag/v2
+ 1 releasehttps://patch-diff.githubusercontent.com/fvalle1/topicTCGA/releases
Packages 0https://patch-diff.githubusercontent.com/users/fvalle1/packages?repo_name=topicTCGA
Please reload this pagehttps://patch-diff.githubusercontent.com/fvalle1/topicTCGA
Please reload this pagehttps://patch-diff.githubusercontent.com/fvalle1/topicTCGA
Jupyter Notebook 100.0% https://patch-diff.githubusercontent.com/fvalle1/topicTCGA/search?l=jupyter-notebook
https://github.com
Termshttps://docs.github.com/site-policy/github-terms/github-terms-of-service
Privacyhttps://docs.github.com/site-policy/privacy-policies/github-privacy-statement
Securityhttps://github.com/security
Statushttps://www.githubstatus.com/
Communityhttps://github.community/
Docshttps://docs.github.com/
Contacthttps://support.github.com?tags=dotcom-footer

Viewport: width=device-width


URLs of crawlers that visited me.