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Title: GitHub - extra-programming/shotgun: Shotgun Sequencing!

Open Graph Title: GitHub - extra-programming/shotgun: Shotgun Sequencing!

X Title: GitHub - extra-programming/shotgun: Shotgun Sequencing!

Description: Shotgun Sequencing! Contribute to extra-programming/shotgun development by creating an account on GitHub.

Open Graph Description: Shotgun Sequencing! Contribute to extra-programming/shotgun development by creating an account on GitHub.

X Description: Shotgun Sequencing! Contribute to extra-programming/shotgun development by creating an account on GitHub.

Opengraph URL: https://github.com/extra-programming/shotgun

X: @github

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This articlehttp://c2.com/cgi/wiki?UnitTestingRandomness
testingDiscussion.mdhttp://github.com/extra-programming/shotgun/blob/master/testingDiscussion.md
https://patch-diff.githubusercontent.com/extra-programming/shotgun#short-term-plans
animated sortershttp://commons.wikimedia.org/wiki/Category:Animations_of_sort_algorithms
shotgun sequencing animationhttp://www.google.com/search?client=safari&rls=en&q=shotgun+sequencing+animation&ie=UTF-8&oe=UTF-8
shotgun sequencing videohttp://www.dnalc.org/view/15537-Shotgun-sequencing-and-dealing-with-repeat-sections-3D-animation-with-basic-narration.html
Wikipedia on String Searchinghttp://en.wikipedia.org/wiki/String_searching_algorithm
usefull websitehttp://www.cs.utexas.edu/users/moore/best-ideas/string-searching/index.html
KPMhttp://www.cs.utexas.edu/users/moore/best-ideas/string-searching/kpm-example.html
Boyer-Moorehttp://www.cs.utexas.edu/users/moore/best-ideas/string-searching/fstrpos-example.html
paper describing his algorithmhttp://www.cs.utexas.edu/users/moore/publications/fstrpos.pdf
good algorithm for small alphabetshttp://www.cs.utexas.edu/users/moore/publications/sustik-moore.pdf
Approximate String Matchinghttp://en.wikipedia.org/wiki/Approximate_string_matching
Bitap algorithmhttp://en.wikipedia.org/wiki/Bitap_algorithm
Jim Kent's GigAssemblerhttp://www.ncbi.nlm.nih.gov/pmc/articles/PMC311095/
http://en.wikipedia.org/wiki/Shotgun_sequencinghttp://en.wikipedia.org/wiki/Shotgun_sequencing
http://en.wikipedia.org/wiki/DNA_sequencing_theoryhttp://en.wikipedia.org/wiki/DNA_sequencing_theory
http://en.wikipedia.org/wiki/DNA_sequencing_theory#Pairwise_end-sequencinghttp://en.wikipedia.org/wiki/DNA_sequencing_theory#Pairwise_end-sequencing
http://en.wikipedia.org/wiki/Sanger_sequencinghttp://en.wikipedia.org/wiki/Sanger_sequencing
http://pixelscommander.com/wp-content/uploads/2014/12/P10.pdfhttp://pixelscommander.com/wp-content/uploads/2014/12/P10.pdf
http://www.cs.usfca.edu/~galles/visualization/Algorithms.htmlhttp://www.cs.usfca.edu/~galles/visualization/Algorithms.html
http://www.cs.usfca.edu/~galles/visualization/Algorithms.htmlhttp://www.cs.usfca.edu/~galles/visualization/Algorithms.html
http://www.nature.com/nature/journal/v431/n7011/full/nature03001.htmlhttp://www.nature.com/nature/journal/v431/n7011/full/nature03001.html
shred challengehttp://archive.darpa.mil/shredderchallenge/
Winning team ”All Your Shreds are belong to U.S.”http://www.newscientist.com/blogs/onepercent/2011/12/darpas-shredder-challenge-has.html
https://medium.com/backchannel/how-a-lone-hacker-shredded-the-myth-of-crowdsourcing-d9d0534f1731https://medium.com/backchannel/how-a-lone-hacker-shredded-the-myth-of-crowdsourcing-d9d0534f1731
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