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https://patch-diff.githubusercontent.com/deepsatflow/MoLD#mold-molecular-docking--molecular-dynamics
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https://private-user-images.githubusercontent.com/36672530/326178903-72f3134f-57b9-417f-a8f9-9ddc20001f90.png?jwt=eyJ0eXAiOiJKV1QiLCJhbGciOiJIUzI1NiJ9.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.orbri-IaQNT86A7x_YFNlR2Zn51_okHY3Loym1dMfnY
https://patch-diff.githubusercontent.com/deepsatflow/MoLD#hiv-enzyme
https://patch-diff.githubusercontent.com/deepsatflow/MoLD#hiv-virus-life-cycle
https://private-user-images.githubusercontent.com/36672530/326173095-fb67efff-a66a-4687-9e49-351730657cb3.png?jwt=eyJ0eXAiOiJKV1QiLCJhbGciOiJIUzI1NiJ9.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.w9BRBoqffJVJd0M3L0XYC9BpuZyLrzlaUc0wkq6ssOM
https://patch-diff.githubusercontent.com/deepsatflow/MoLD#hiv-virus-life-cycle-1
https://www.youtube.com/watch?v=XP8tMBm8zbYhttps://www.youtube.com/watch?v=XP8tMBm8zbY
https://www.youtube.com/watch?v=-sNjOZL_Sbghttps://www.youtube.com/watch?v=-sNjOZL_Sbg
https://autodock-vina.readthedocs.io/_/downloads/en/latest/pdf/https://autodock-vina.readthedocs.io/_/downloads/en/latest/pdf/
https://www.youtube.com/watch?v=CmLvJ_Yxs9Ehttps://www.youtube.com/watch?v=CmLvJ_Yxs9E
https://www.youtube.com/watch?v=tFFxNTvvoJIhttps://www.youtube.com/watch?v=tFFxNTvvoJI
https://www.youtube.com/watch?v=2ewpDYW081Yhttps://www.youtube.com/watch?v=2ewpDYW081Y
https://youtu.be/rrBsAzq0Fwg?si=d9jmJHKs_MA4zz1Hhttps://youtu.be/rrBsAzq0Fwg?si=d9jmJHKs_MA4zz1H
https://youtu.be/_1zSS1bnHFk?si=mx_NULYeSzJVPeDhhttps://youtu.be/_1zSS1bnHFk?si=mx_NULYeSzJVPeDh
https://youtu.be/TyzjCUfPQj0?si=8ZV8E8nkIXlJpwVkhttps://youtu.be/TyzjCUfPQj0?si=8ZV8E8nkIXlJpwVk
https://youtu.be/dhs0VOeCo_s?si=0yIdmrvb_0EdQxc8https://youtu.be/dhs0VOeCo_s?si=0yIdmrvb_0EdQxc8
https://www.csb.pitt.edu/people/faculty/david-koes/https://www.csb.pitt.edu/people/faculty/david-koes/
https://en.wikipedia.org/wiki/Pharmacophorehttps://en.wikipedia.org/wiki/Pharmacophore
https://pharmit.csb.pitt.edu/https://pharmit.csb.pitt.edu/
https://github.com/ccsb-scripps/AutoDock-Vinahttps://github.com/ccsb-scripps/AutoDock-Vina
https://www.youtube.com/watch?v=7w3SHcdn0gYhttps://www.youtube.com/watch?v=7w3SHcdn0gY
https://www.youtube.com/watch?v=UFuVL_0Tpi0https://www.youtube.com/watch?v=UFuVL_0Tpi0
https://www.youtube.com/watch?v=5SwSbb52PTUhttps://www.youtube.com/watch?v=5SwSbb52PTU
https://en.wikipedia.org/wiki/Structure_and_genome_of_HIVhttps://en.wikipedia.org/wiki/Structure_and_genome_of_HIV
https://www.ncbi.nlm.nih.gov/books/NBK513308/https://www.ncbi.nlm.nih.gov/books/NBK513308/
https://github.com/gnina/gninahttps://github.com/gnina/gnina
https://github.com/deepchem/deepchem/tree/master?tab=readme-ov-filehttps://github.com/deepchem/deepchem/tree/master?tab=readme-ov-file
https://deepchem.io/tutorials/modeling-protein-ligand-interactions/https://deepchem.io/tutorials/modeling-protein-ligand-interactions/
https://colab.research.google.com/github/deepchem/deepchem/blob/master/examples/tutorials/An_Introduction_To_MoleculeNet.ipynb#scrollTo=ZElUmobLDLwqhttps://colab.research.google.com/github/deepchem/deepchem/blob/master/examples/tutorials/An_Introduction_To_MoleculeNet.ipynb#scrollTo=ZElUmobLDLwq
https://colab.research.google.com/github/deepchem/deepchem/blob/master/examples/tutorials/Modeling_Protein_Ligand_Interactions_With_Atomic_Convolutions.ipynb#scrollTo=f7FPLsj4nB-6https://colab.research.google.com/github/deepchem/deepchem/blob/master/examples/tutorials/Modeling_Protein_Ligand_Interactions_With_Atomic_Convolutions.ipynb#scrollTo=f7FPLsj4nB-6
https://colab.research.google.com/github/deepchem/deepchem/blob/master/examples/tutorials/Modeling_Protein_Ligand_Interactions.ipynb#scrollTo=cysXf_3bqTs0https://colab.research.google.com/github/deepchem/deepchem/blob/master/examples/tutorials/Modeling_Protein_Ligand_Interactions.ipynb#scrollTo=cysXf_3bqTs0
https://www.youtube.com/watch?v=AHVJv5RNqKs&t=870shttps://www.youtube.com/watch?v=AHVJv5RNqKs&t=870s
https://moleculenet.org/datasets-1https://moleculenet.org/datasets-1
https://github.com/deepchem/deepchem/blob/master/examples/tutorials/DeepChemXAlphafold.ipynbhttps://github.com/deepchem/deepchem/blob/master/examples/tutorials/DeepChemXAlphafold.ipynb
https://github.com/chemprop/chemprop/tree/masterhttps://github.com/chemprop/chemprop/tree/master
https://chemprop.readthedocs.io/en/latest/args.html#train-argumentshttps://chemprop.readthedocs.io/en/latest/args.html#train-arguments
https://journals.lww.com/jaids/abstract/1999/09010/nitric_oxide_modulates_hiv_1_replication.1.aspxhttps://journals.lww.com/jaids/abstract/1999/09010/nitric_oxide_modulates_hiv_1_replication.1.aspx
https://en.wikipedia.org/wiki/Abacavirhttps://en.wikipedia.org/wiki/Abacavir
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC102085/#:~:text=The%20increased%20production%20of%20cytokines,as%20the%20brain%20and%20lunghttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC102085/#:~:text=The%20increased%20production%20of%20cytokines,as%20the%20brain%20and%20lung
https://en.wikipedia.org/wiki/Valinomycinhttps://en.wikipedia.org/wiki/Valinomycin
https://en.wikipedia.org/wiki/Chlorprothixenehttps://en.wikipedia.org/wiki/Chlorprothixene
https://en.wikipedia.org/wiki/Foscarnethttps://en.wikipedia.org/wiki/Foscarnet
https://en.wikipedia.org/wiki/HIVhttps://en.wikipedia.org/wiki/HIV
https://en.wikipedia.org/wiki/Antiviral_drughttps://en.wikipedia.org/wiki/Antiviral_drug
https://go.drugbank.com/structures/small_molecule_drugs/DB04542https://go.drugbank.com/structures/small_molecule_drugs/DB04542
https://go.drugbank.com/drugs/DB03150https://go.drugbank.com/drugs/DB03150
https://www.ebi.ac.uk/pdbe-srv/pdbechem/chemicalCompound/show/2DThttps://www.ebi.ac.uk/pdbe-srv/pdbechem/chemicalCompound/show/2DT
https://zinc15.docking.org/substances/ZINC000169289767/https://zinc15.docking.org/substances/ZINC000169289767/
https://www.drugs.com/promethazine.htmlhttps://www.drugs.com/promethazine.html
https://www.cell.com/cell/fulltext/S0092-8674(20)30102-1#secsectitle0060https://www.cell.com/cell/fulltext/S0092-8674(20)30102-1#secsectitle0060
https://www.youtube.com/watch?v=U8rHBrdHBDE&t=147shttps://www.youtube.com/watch?v=U8rHBrdHBDE&t=147s
https://www.youtube.com/watch?v=YnLMG6MHoYEhttps://www.youtube.com/watch?v=YnLMG6MHoYE
https://alphafold.ebi.ac.uk/entry/A0A0M3KKW8https://alphafold.ebi.ac.uk/entry/A0A0M3KKW8
https://www.annualreviews.org/docserver/fulltext/biochem/67/1/annurev.biochem.67.1.1.pdf?expires=1711383569&id=id&accname=guest&checksum=258340F869493C1EDB811D3D86CBF73Bhttps://www.annualreviews.org/docserver/fulltext/biochem/67/1/annurev.biochem.67.1.1.pdf?expires=1711383569&id=id&accname=guest&checksum=258340F869493C1EDB811D3D86CBF73B
https://en.wikipedia.org/wiki/Enfuvirtidehttps://en.wikipedia.org/wiki/Enfuvirtide
https://en.wikipedia.org/wiki/Ritonavirhttps://en.wikipedia.org/wiki/Ritonavir
https://www.webmd.com/hiv-aids/aids-hiv-medicationhttps://www.webmd.com/hiv-aids/aids-hiv-medication
https://zinc15.docking.org/tranches/home/https://zinc15.docking.org/tranches/home/
https://www.uniprot.org/uniprotkb/A0A0M3KKW8/entryhttps://www.uniprot.org/uniprotkb/A0A0M3KKW8/entry
https://alphafold.ebi.ac.uk/entry/A0A0M3KKW8https://alphafold.ebi.ac.uk/entry/A0A0M3KKW8
https://www.ebi.ac.uk/pdbe/entry/pdb/8F9Zhttps://www.ebi.ac.uk/pdbe/entry/pdb/8F9Z
https://www.webmd.com/hiv-aids/aids-hiv-medicationhttps://www.webmd.com/hiv-aids/aids-hiv-medication
https://www.ncbi.nlm.nih.gov/books/NBK513308/https://www.ncbi.nlm.nih.gov/books/NBK513308/
https://www.annualreviews.org/doi/pdf/10.1146/annurev.biochem.67.1.1https://www.annualreviews.org/doi/pdf/10.1146/annurev.biochem.67.1.1
https://en.wikipedia.org/wiki/HIV-1_proteasehttps://en.wikipedia.org/wiki/HIV-1_protease
https://en.wikipedia.org/wiki/Ritonavirhttps://en.wikipedia.org/wiki/Ritonavir
https://alphafold.ebi.ac.uk/entry/A0A0M3KKW8https://alphafold.ebi.ac.uk/entry/A0A0M3KKW8
https://www.youtube.com/watch?v=YnLMG6MHoYEhttps://www.youtube.com/watch?v=YnLMG6MHoYE
https://www.ebi.ac.uk/training/online/courses/alphafold/https://www.ebi.ac.uk/training/online/courses/alphafold/
https://zinc15.docking.org/substances/ZINC000013597823/https://zinc15.docking.org/substances/ZINC000013597823/
https://drugs.ncats.io/drug/776E09GMHQhttps://drugs.ncats.io/drug/776E09GMHQ
https://www.google.com/search?q=cefuroxime&sourceid=chrome&ie=UTF-8https://www.google.com/search?q=cefuroxime&sourceid=chrome&ie=UTF-8
https://www.cell.com/cell/fulltext/S0092-8674(20)30102-1?_returnURL=https%3A%2F%2Flinkinghub.elsevier.com%2Fretrieve%2Fpii%2FS0092867420301021%3Fshowall%3Dtrue#secsectitle0030https://www.cell.com/cell/fulltext/S0092-8674(20)30102-1?_returnURL=https%3A%2F%2Flinkinghub.elsevier.com%2Fretrieve%2Fpii%2FS0092867420301021%3Fshowall%3Dtrue#secsectitle0030
https://archive.epa.gov/med/med_archive_03/web/html/smiles.htmlhttps://archive.epa.gov/med/med_archive_03/web/html/smiles.html
https://www.ncbi.nlm.nih.gov/books/NBK513308/https://www.ncbi.nlm.nih.gov/books/NBK513308/
https://go.drugbank.com/drugs/DB00552https://go.drugbank.com/drugs/DB00552
https://en.wikipedia.org/wiki/Nitrous_oxidehttps://en.wikipedia.org/wiki/Nitrous_oxide
https://moleculenet.org/datasets-1https://moleculenet.org/datasets-1
https://en.wikipedia.org/wiki/Zidovudinehttps://en.wikipedia.org/wiki/Zidovudine
https://en.wikipedia.org/wiki/Stavudinehttps://en.wikipedia.org/wiki/Stavudine
https://zinc15.docking.org/substances/ZINC000169289767/https://zinc15.docking.org/substances/ZINC000169289767/
https://en.wikipedia.org/wiki/Trypan_bluehttps://en.wikipedia.org/wiki/Trypan_blue
https://en.wikipedia.org/wiki/Floxuridinehttps://en.wikipedia.org/wiki/Floxuridine
https://en.wikipedia.org/wiki/Sulfasalazinehttps://en.wikipedia.org/wiki/Sulfasalazine
https://en.wikipedia.org/wiki/Zidovudinehttps://en.wikipedia.org/wiki/Zidovudine
https://pubchem.ncbi.nlm.nih.gov/compound/Rolitetracyclinehttps://pubchem.ncbi.nlm.nih.gov/compound/Rolitetracycline
https://www.google.com/search?q=Zalcitabine&oq=Zalcitabine&gs_lcrp=EgZjaHJvbWUyBggAEEUYOTIGCAEQLhhA0gEHNTk0ajBqMagCALACAA&sourceid=chrome&ie=UTF-8https://www.google.com/search?q=Zalcitabine&oq=Zalcitabine&gs_lcrp=EgZjaHJvbWUyBggAEEUYOTIGCAEQLhhA0gEHNTk0ajBqMagCALACAA&sourceid=chrome&ie=UTF-8
https://journals.lww.com/jaids/abstract/1999/09010/nitric_oxide_modulates_hiv_1_replication.1.aspx#:~:text=Summary%3A,NO%20on%20HIV%2D1%20replicationhttps://journals.lww.com/jaids/abstract/1999/09010/nitric_oxide_modulates_hiv_1_replication.1.aspx#:~:text=Summary%3A,NO%20on%20HIV%2D1%20replication
https://www.google.com/search?q=Retrovir&sca_esv=9aead19d0345d1c5&ei=uxjuZaq5KNKNnesPloGW6As&ved=0ahUKEwjqgpaHxeqEAxXSRmcHHZaABb0Q4dUDCBE&oq=Retrovir&gs_lp=Egxnd3Mtd2l6LXNlcnAiCFJldHJvdmlySABQAFgAcAB4AZABAJgBAKABAKoBALgBDMgBAJgCAKACAJgDAJIHAKAHAA&sclient=gws-wiz-serphttps://www.google.com/search?q=Retrovir&sca_esv=9aead19d0345d1c5&ei=uxjuZaq5KNKNnesPloGW6As&ved=0ahUKEwjqgpaHxeqEAxXSRmcHHZaABb0Q4dUDCBE&oq=Retrovir&gs_lp=Egxnd3Mtd2l6LXNlcnAiCFJldHJvdmlySABQAFgAcAB4AZABAJgBAKABAKoBALgBDMgBAJgCAKACAJgDAJIHAKAHAA&sclient=gws-wiz-serp
https://zinc15.docking.org/substances/ZINC000169289767/https://zinc15.docking.org/substances/ZINC000169289767/
https://en.wikipedia.org/wiki/HIVhttps://en.wikipedia.org/wiki/HIV
https://www.science.org/doi/10.1126/science.adl2528https://www.science.org/doi/10.1126/science.adl2528
https://github.com/baker-laboratory/RoseTTAFold-All-Atomhttps://github.com/baker-laboratory/RoseTTAFold-All-Atom
https://en.wikipedia.org/wiki/Abacavirhttps://en.wikipedia.org/wiki/Abacavir
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