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Title: GitHub · Where software is built

Open Graph Title: databio/geniml

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Description: Genomic interval machine learning. Contribute to databio/geniml development by creating an account on GitHub.

Open Graph Description: Genomic interval machine learning. Contribute to databio/geniml development by creating an account on GitHub.

X Description: Genomic interval machine learning. Contribute to databio/geniml development by creating an account on GitHub.

Opengraph URL: https://github.com/databio/geniml

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Standardize Atacformer and ScEmbed APIhttps://patch-diff.githubusercontent.com/databio/geniml/issues/17
enhancementNew feature or requesthttps://patch-diff.githubusercontent.com/databio/geniml/issues?q=is%3Aissue%20state%3Aopen%20label%3Aenhancement
nleroy917https://patch-diff.githubusercontent.com/databio/geniml/issues?q=is%3Aissue%20state%3Aopen%20author%3Anleroy917
geniml wont install with python 3.13https://patch-diff.githubusercontent.com/databio/geniml/issues/16
nleroy917https://patch-diff.githubusercontent.com/databio/geniml/issues?q=is%3Aissue%20state%3Aopen%20author%3Anleroy917
Deprecate .gtok files for nowhttps://patch-diff.githubusercontent.com/databio/geniml/issues/14
enhancementNew feature or requesthttps://patch-diff.githubusercontent.com/databio/geniml/issues?q=is%3Aissue%20state%3Aopen%20label%3Aenhancement
nleroy917https://patch-diff.githubusercontent.com/databio/geniml/issues?q=is%3Aissue%20state%3Aopen%20author%3Anleroy917
Create a TokenizedCells classhttps://patch-diff.githubusercontent.com/databio/geniml/issues/13
enhancementNew feature or requesthttps://patch-diff.githubusercontent.com/databio/geniml/issues?q=is%3Aissue%20state%3Aopen%20label%3Aenhancement
good first issueGood for newcomershttps://patch-diff.githubusercontent.com/databio/geniml/issues?q=is%3Aissue%20state%3Aopen%20label%3A%22good%20first%20issue%22
nleroy917https://patch-diff.githubusercontent.com/databio/geniml/issues?q=is%3Aissue%20state%3Aopen%20author%3Anleroy917
Atacformer needs unit testshttps://patch-diff.githubusercontent.com/databio/geniml/issues/11
atacformerhttps://patch-diff.githubusercontent.com/databio/geniml/issues?q=is%3Aissue%20state%3Aopen%20label%3Aatacformer
nleroy917https://patch-diff.githubusercontent.com/databio/geniml/issues?q=is%3Aissue%20state%3Aopen%20author%3Anleroy917
Make the context_size configurable when running encode_tokenized_cellshttps://patch-diff.githubusercontent.com/databio/geniml/issues/10
atacformerhttps://patch-diff.githubusercontent.com/databio/geniml/issues?q=is%3Aissue%20state%3Aopen%20label%3Aatacformer
enhancementNew feature or requesthttps://patch-diff.githubusercontent.com/databio/geniml/issues?q=is%3Aissue%20state%3Aopen%20label%3Aenhancement
nleroy917https://patch-diff.githubusercontent.com/databio/geniml/issues?q=is%3Aissue%20state%3Aopen%20author%3Anleroy917
Atacformer installation issues megathreadhttps://patch-diff.githubusercontent.com/databio/geniml/issues/9
atacformerhttps://patch-diff.githubusercontent.com/databio/geniml/issues?q=is%3Aissue%20state%3Aopen%20label%3Aatacformer
nleroy917https://patch-diff.githubusercontent.com/databio/geniml/issues?q=is%3Aissue%20state%3Aopen%20author%3Anleroy917
tokenization of scEmbedhttps://patch-diff.githubusercontent.com/databio/geniml/issues/7
Keegan17123https://patch-diff.githubusercontent.com/databio/geniml/issues?q=is%3Aissue%20state%3Aopen%20author%3AKeegan17123
error in building model for likelihood (LH)https://patch-diff.githubusercontent.com/databio/geniml/issues/6
LimKaiShihttps://patch-diff.githubusercontent.com/databio/geniml/issues?q=is%3Aissue%20state%3Aopen%20author%3ALimKaiShi
Can bbclient module be its own package?https://patch-diff.githubusercontent.com/databio/geniml/issues/4
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