René's URL Explorer Experiment


Title: GitHub - combiz/scFlow: Single-cell/nuclei RNA-seq analysis tools in R for a complete workflow.

Open Graph Title: GitHub - combiz/scFlow: Single-cell/nuclei RNA-seq analysis tools in R for a complete workflow.

X Title: GitHub - combiz/scFlow: Single-cell/nuclei RNA-seq analysis tools in R for a complete workflow.

Description: Single-cell/nuclei RNA-seq analysis tools in R for a complete workflow. - combiz/scFlow

Open Graph Description: Single-cell/nuclei RNA-seq analysis tools in R for a complete workflow. - combiz/scFlow

X Description: Single-cell/nuclei RNA-seq analysis tools in R for a complete workflow. - combiz/scFlow

Opengraph URL: https://github.com/combiz/scFlow

X: @github

direct link

Domain: patch-diff.githubusercontent.com

route-pattern/:user_id/:repository
route-controllerfiles
route-actiondisambiguate
fetch-noncev2:aafb11d2-2c56-2302-ac38-456498a5b95f
current-catalog-service-hashf3abb0cc802f3d7b95fc8762b94bdcb13bf39634c40c357301c4aa1d67a256fb
request-id901A:1C92F3:F8814:134D29:697ECB62
html-safe-nonce7ebca16db64c74e94e9a6dafc1f326c44b8c00c828f2af9386aceccc3cab5819
visitor-payloadeyJyZWZlcnJlciI6IiIsInJlcXVlc3RfaWQiOiI5MDFBOjFDOTJGMzpGODgxNDoxMzREMjk6Njk3RUNCNjIiLCJ2aXNpdG9yX2lkIjoiMTY4OTE4NjI3MzkzNzI0NzA3NCIsInJlZ2lvbl9lZGdlIjoiaWFkIiwicmVnaW9uX3JlbmRlciI6ImlhZCJ9
visitor-hmac5d6d1727ab06efb65941d10fd5eac25e7a6dbf7ff91eecdbb63efbcecc67709c
hovercard-subject-tagrepository:215111862
github-keyboard-shortcutsrepository,copilot
google-site-verificationApib7-x98H0j5cPqHWwSMm6dNU4GmODRoqxLiDzdx9I
octolytics-urlhttps://collector.github.com/github/collect
analytics-location//
fb:app_id1401488693436528
apple-itunes-appapp-id=1477376905, app-argument=https://github.com/combiz/scFlow
twitter:imagehttps://repository-images.githubusercontent.com/215111862/61a892ae-11bd-4d0b-9389-c9ef3a20c32e
twitter:cardsummary_large_image
og:imagehttps://repository-images.githubusercontent.com/215111862/61a892ae-11bd-4d0b-9389-c9ef3a20c32e
og:image:altSingle-cell/nuclei RNA-seq analysis tools in R for a complete workflow. - combiz/scFlow
og:site_nameGitHub
og:typeobject
hostnamegithub.com
expected-hostnamegithub.com
None60279d4097367e16897439d16d6bbe4180663db828c666eeed2656988ffe59f6
turbo-cache-controlno-preview
go-importgithub.com/combiz/scFlow git https://github.com/combiz/scFlow.git
octolytics-dimension-user_id31043044
octolytics-dimension-user_logincombiz
octolytics-dimension-repository_id215111862
octolytics-dimension-repository_nwocombiz/scFlow
octolytics-dimension-repository_publictrue
octolytics-dimension-repository_is_forkfalse
octolytics-dimension-repository_network_root_id215111862
octolytics-dimension-repository_network_root_nwocombiz/scFlow
turbo-body-classeslogged-out env-production page-responsive
disable-turbofalse
browser-stats-urlhttps://api.github.com/_private/browser/stats
browser-errors-urlhttps://api.github.com/_private/browser/errors
release7c85641c598ad130c74f7bcc27f58575cac69551
ui-targetfull
theme-color#1e2327
color-schemelight dark

Links:

Skip to contenthttps://patch-diff.githubusercontent.com/combiz/scFlow#start-of-content
https://patch-diff.githubusercontent.com/
Sign in https://patch-diff.githubusercontent.com/login?return_to=https%3A%2F%2Fgithub.com%2Fcombiz%2FscFlow
GitHub CopilotWrite better code with AIhttps://github.com/features/copilot
GitHub SparkBuild and deploy intelligent appshttps://github.com/features/spark
GitHub ModelsManage and compare promptshttps://github.com/features/models
MCP RegistryNewIntegrate external toolshttps://github.com/mcp
ActionsAutomate any workflowhttps://github.com/features/actions
CodespacesInstant dev environmentshttps://github.com/features/codespaces
IssuesPlan and track workhttps://github.com/features/issues
Code ReviewManage code changeshttps://github.com/features/code-review
GitHub Advanced SecurityFind and fix vulnerabilitieshttps://github.com/security/advanced-security
Code securitySecure your code as you buildhttps://github.com/security/advanced-security/code-security
Secret protectionStop leaks before they starthttps://github.com/security/advanced-security/secret-protection
Why GitHubhttps://github.com/why-github
Documentationhttps://docs.github.com
Bloghttps://github.blog
Changeloghttps://github.blog/changelog
Marketplacehttps://github.com/marketplace
View all featureshttps://github.com/features
Enterpriseshttps://github.com/enterprise
Small and medium teamshttps://github.com/team
Startupshttps://github.com/enterprise/startups
Nonprofitshttps://github.com/solutions/industry/nonprofits
App Modernizationhttps://github.com/solutions/use-case/app-modernization
DevSecOpshttps://github.com/solutions/use-case/devsecops
DevOpshttps://github.com/solutions/use-case/devops
CI/CDhttps://github.com/solutions/use-case/ci-cd
View all use caseshttps://github.com/solutions/use-case
Healthcarehttps://github.com/solutions/industry/healthcare
Financial serviceshttps://github.com/solutions/industry/financial-services
Manufacturinghttps://github.com/solutions/industry/manufacturing
Governmenthttps://github.com/solutions/industry/government
View all industrieshttps://github.com/solutions/industry
View all solutionshttps://github.com/solutions
AIhttps://github.com/resources/articles?topic=ai
Software Developmenthttps://github.com/resources/articles?topic=software-development
DevOpshttps://github.com/resources/articles?topic=devops
Securityhttps://github.com/resources/articles?topic=security
View all topicshttps://github.com/resources/articles
Customer storieshttps://github.com/customer-stories
Events & webinarshttps://github.com/resources/events
Ebooks & reportshttps://github.com/resources/whitepapers
Business insightshttps://github.com/solutions/executive-insights
GitHub Skillshttps://skills.github.com
Documentationhttps://docs.github.com
Customer supporthttps://support.github.com
Community forumhttps://github.com/orgs/community/discussions
Trust centerhttps://github.com/trust-center
Partnershttps://github.com/partners
GitHub SponsorsFund open source developershttps://github.com/sponsors
Security Labhttps://securitylab.github.com
Maintainer Communityhttps://maintainers.github.com
Acceleratorhttps://github.com/accelerator
Archive Programhttps://archiveprogram.github.com
Topicshttps://github.com/topics
Trendinghttps://github.com/trending
Collectionshttps://github.com/collections
Enterprise platformAI-powered developer platformhttps://github.com/enterprise
GitHub Advanced SecurityEnterprise-grade security featureshttps://github.com/security/advanced-security
Copilot for BusinessEnterprise-grade AI featureshttps://github.com/features/copilot/copilot-business
Premium SupportEnterprise-grade 24/7 supporthttps://github.com/premium-support
Pricinghttps://github.com/pricing
Search syntax tipshttps://docs.github.com/search-github/github-code-search/understanding-github-code-search-syntax
documentationhttps://docs.github.com/search-github/github-code-search/understanding-github-code-search-syntax
Sign in https://patch-diff.githubusercontent.com/login?return_to=https%3A%2F%2Fgithub.com%2Fcombiz%2FscFlow
Sign up https://patch-diff.githubusercontent.com/signup?ref_cta=Sign+up&ref_loc=header+logged+out&ref_page=%2F%3Cuser-name%3E%2F%3Crepo-name%3E&source=header-repo&source_repo=combiz%2FscFlow
Reloadhttps://patch-diff.githubusercontent.com/combiz/scFlow
Reloadhttps://patch-diff.githubusercontent.com/combiz/scFlow
Reloadhttps://patch-diff.githubusercontent.com/combiz/scFlow
combiz https://patch-diff.githubusercontent.com/combiz
scFlowhttps://patch-diff.githubusercontent.com/combiz/scFlow
Notifications https://patch-diff.githubusercontent.com/login?return_to=%2Fcombiz%2FscFlow
Fork 13 https://patch-diff.githubusercontent.com/login?return_to=%2Fcombiz%2FscFlow
Star 57 https://patch-diff.githubusercontent.com/login?return_to=%2Fcombiz%2FscFlow
combiz.github.io/scFlow/https://combiz.github.io/scFlow/
Unknown LICENSE https://patch-diff.githubusercontent.com/combiz/scFlow/blob/master/LICENSE
GPL-3.0 LICENSE.md https://patch-diff.githubusercontent.com/combiz/scFlow/blob/master/LICENSE.md
57 stars https://patch-diff.githubusercontent.com/combiz/scFlow/stargazers
13 forks https://patch-diff.githubusercontent.com/combiz/scFlow/forks
Branches https://patch-diff.githubusercontent.com/combiz/scFlow/branches
Tags https://patch-diff.githubusercontent.com/combiz/scFlow/tags
Activity https://patch-diff.githubusercontent.com/combiz/scFlow/activity
Star https://patch-diff.githubusercontent.com/login?return_to=%2Fcombiz%2FscFlow
Notifications https://patch-diff.githubusercontent.com/login?return_to=%2Fcombiz%2FscFlow
Code https://patch-diff.githubusercontent.com/combiz/scFlow
Issues 9 https://patch-diff.githubusercontent.com/combiz/scFlow/issues
Pull requests 5 https://patch-diff.githubusercontent.com/combiz/scFlow/pulls
Discussions https://patch-diff.githubusercontent.com/combiz/scFlow/discussions
Actions https://patch-diff.githubusercontent.com/combiz/scFlow/actions
Security 0 https://patch-diff.githubusercontent.com/combiz/scFlow/security
Insights https://patch-diff.githubusercontent.com/combiz/scFlow/pulse
Code https://patch-diff.githubusercontent.com/combiz/scFlow
Issues https://patch-diff.githubusercontent.com/combiz/scFlow/issues
Pull requests https://patch-diff.githubusercontent.com/combiz/scFlow/pulls
Discussions https://patch-diff.githubusercontent.com/combiz/scFlow/discussions
Actions https://patch-diff.githubusercontent.com/combiz/scFlow/actions
Security https://patch-diff.githubusercontent.com/combiz/scFlow/security
Insights https://patch-diff.githubusercontent.com/combiz/scFlow/pulse
Brancheshttps://patch-diff.githubusercontent.com/combiz/scFlow/branches
Tagshttps://patch-diff.githubusercontent.com/combiz/scFlow/tags
https://patch-diff.githubusercontent.com/combiz/scFlow/branches
https://patch-diff.githubusercontent.com/combiz/scFlow/tags
558 Commitshttps://patch-diff.githubusercontent.com/combiz/scFlow/commits/master/
https://patch-diff.githubusercontent.com/combiz/scFlow/commits/master/
.githubhttps://patch-diff.githubusercontent.com/combiz/scFlow/tree/master/.github
.githubhttps://patch-diff.githubusercontent.com/combiz/scFlow/tree/master/.github
Rhttps://patch-diff.githubusercontent.com/combiz/scFlow/tree/master/R
Rhttps://patch-diff.githubusercontent.com/combiz/scFlow/tree/master/R
data-rawhttps://patch-diff.githubusercontent.com/combiz/scFlow/tree/master/data-raw
data-rawhttps://patch-diff.githubusercontent.com/combiz/scFlow/tree/master/data-raw
docshttps://patch-diff.githubusercontent.com/combiz/scFlow/tree/master/docs
docshttps://patch-diff.githubusercontent.com/combiz/scFlow/tree/master/docs
insthttps://patch-diff.githubusercontent.com/combiz/scFlow/tree/master/inst
insthttps://patch-diff.githubusercontent.com/combiz/scFlow/tree/master/inst
manhttps://patch-diff.githubusercontent.com/combiz/scFlow/tree/master/man
manhttps://patch-diff.githubusercontent.com/combiz/scFlow/tree/master/man
mischttps://patch-diff.githubusercontent.com/combiz/scFlow/tree/master/misc
mischttps://patch-diff.githubusercontent.com/combiz/scFlow/tree/master/misc
pkgdown/faviconhttps://patch-diff.githubusercontent.com/combiz/scFlow/tree/master/pkgdown/favicon
pkgdown/faviconhttps://patch-diff.githubusercontent.com/combiz/scFlow/tree/master/pkgdown/favicon
testshttps://patch-diff.githubusercontent.com/combiz/scFlow/tree/master/tests
testshttps://patch-diff.githubusercontent.com/combiz/scFlow/tree/master/tests
vignetteshttps://patch-diff.githubusercontent.com/combiz/scFlow/tree/master/vignettes
vignetteshttps://patch-diff.githubusercontent.com/combiz/scFlow/tree/master/vignettes
.Rbuildignorehttps://patch-diff.githubusercontent.com/combiz/scFlow/blob/master/.Rbuildignore
.Rbuildignorehttps://patch-diff.githubusercontent.com/combiz/scFlow/blob/master/.Rbuildignore
.Rprofilehttps://patch-diff.githubusercontent.com/combiz/scFlow/blob/master/.Rprofile
.Rprofilehttps://patch-diff.githubusercontent.com/combiz/scFlow/blob/master/.Rprofile
.gitignorehttps://patch-diff.githubusercontent.com/combiz/scFlow/blob/master/.gitignore
.gitignorehttps://patch-diff.githubusercontent.com/combiz/scFlow/blob/master/.gitignore
DESCRIPTIONhttps://patch-diff.githubusercontent.com/combiz/scFlow/blob/master/DESCRIPTION
DESCRIPTIONhttps://patch-diff.githubusercontent.com/combiz/scFlow/blob/master/DESCRIPTION
Dockerfilehttps://patch-diff.githubusercontent.com/combiz/scFlow/blob/master/Dockerfile
Dockerfilehttps://patch-diff.githubusercontent.com/combiz/scFlow/blob/master/Dockerfile
LICENSEhttps://patch-diff.githubusercontent.com/combiz/scFlow/blob/master/LICENSE
LICENSEhttps://patch-diff.githubusercontent.com/combiz/scFlow/blob/master/LICENSE
LICENSE.mdhttps://patch-diff.githubusercontent.com/combiz/scFlow/blob/master/LICENSE.md
LICENSE.mdhttps://patch-diff.githubusercontent.com/combiz/scFlow/blob/master/LICENSE.md
NAMESPACEhttps://patch-diff.githubusercontent.com/combiz/scFlow/blob/master/NAMESPACE
NAMESPACEhttps://patch-diff.githubusercontent.com/combiz/scFlow/blob/master/NAMESPACE
NEWS.mdhttps://patch-diff.githubusercontent.com/combiz/scFlow/blob/master/NEWS.md
NEWS.mdhttps://patch-diff.githubusercontent.com/combiz/scFlow/blob/master/NEWS.md
README.Rmdhttps://patch-diff.githubusercontent.com/combiz/scFlow/blob/master/README.Rmd
README.Rmdhttps://patch-diff.githubusercontent.com/combiz/scFlow/blob/master/README.Rmd
README.mdhttps://patch-diff.githubusercontent.com/combiz/scFlow/blob/master/README.md
README.mdhttps://patch-diff.githubusercontent.com/combiz/scFlow/blob/master/README.md
_pkgdown.ymlhttps://patch-diff.githubusercontent.com/combiz/scFlow/blob/master/_pkgdown.yml
_pkgdown.ymlhttps://patch-diff.githubusercontent.com/combiz/scFlow/blob/master/_pkgdown.yml
appveyor.ymlhttps://patch-diff.githubusercontent.com/combiz/scFlow/blob/master/appveyor.yml
appveyor.ymlhttps://patch-diff.githubusercontent.com/combiz/scFlow/blob/master/appveyor.yml
codecov.ymlhttps://patch-diff.githubusercontent.com/combiz/scFlow/blob/master/codecov.yml
codecov.ymlhttps://patch-diff.githubusercontent.com/combiz/scFlow/blob/master/codecov.yml
scFlow.Rprojhttps://patch-diff.githubusercontent.com/combiz/scFlow/blob/master/scFlow.Rproj
scFlow.Rprojhttps://patch-diff.githubusercontent.com/combiz/scFlow/blob/master/scFlow.Rproj
READMEhttps://patch-diff.githubusercontent.com/combiz/scFlow
Licensehttps://patch-diff.githubusercontent.com/combiz/scFlow
GPL-3.0 licensehttps://patch-diff.githubusercontent.com/combiz/scFlow
https://patch-diff.githubusercontent.com/combiz/scFlow/blob/master/man/figures/logo.png
https://patch-diff.githubusercontent.com/combiz/scFlow#scflow---single-cell-workflow
https://github.com/combiz/scFlow/actions/workflows/r_package.yaml
https://github.com/combiz/scFlow/actions/workflows/r_package2.yaml
https://combiz.github.io/scFlow/
https://combiz.github.io/scflow-manual/
https://github.com/combiz/scFlow/issues
https://www.gnu.org/licenses/gpl-3.0
nf-core/scflowhttps://nf-co.re/scflow
emptyDropshttps://github.com/MarioniLab/DropletUtils
DoubletFinderhttps://github.com/chris-mcginnis-ucsf/DoubletFinder
scaterhttps://github.com/davismcc/scater
Ligerhttps://github.com/MacoskoLab/rliger
kBethttps://github.com/theislab/kBET
UpSetRhttps://github.com/hms-dbmi/UpSetR/
monoclehttps://github.com/cole-trapnell-lab/monocle-release
monoclehttps://github.com/cole-trapnell-lab/monocle-release
EWCEhttps://github.com/NathanSkene/EWCE
Allen Human Brain Atlashttps://www.brain-map.org
MASThttps://github.com/RGLab/MAST
Limmahttps://github.com/cran/limma
EnrichRhttps://github.com/cran/enrichR
WebGestaltRhttp://www.webgestalt.org/
DirichletReghttps://cran.r-project.org/web/packages/DirichletReg/index.html
https://patch-diff.githubusercontent.com/combiz/scFlow#get-started-and-documentation
https://combiz.github.io/scflow-manual/https://combiz.github.io/scflow-manual/
https://patch-diff.githubusercontent.com/combiz/scFlow#running-rstudio-server-with-pre-installed-scflow-via-docker
herehttps://davetang.org/muse/2021/04/24/running-rstudio-server-with-docker/
https://patch-diff.githubusercontent.com/combiz/scFlow#support
https://patch-diff.githubusercontent.com/combiz/scFlow#how-to-contribute
CONTRIBUTINGhttps://github.com/scFlow/blob/master/CONTRIBUTING.md
https://patch-diff.githubusercontent.com/combiz/scFlow#reference-papers
combiz.github.io/scFlow/https://combiz.github.io/scFlow/
rna-seq https://patch-diff.githubusercontent.com/topics/rna-seq
r https://patch-diff.githubusercontent.com/topics/r
single-cell https://patch-diff.githubusercontent.com/topics/single-cell
Readme https://patch-diff.githubusercontent.com/combiz/scFlow#readme-ov-file
Unknown LICENSE https://patch-diff.githubusercontent.com/combiz/scFlow/blob/master/LICENSE
GPL-3.0 LICENSE.md https://patch-diff.githubusercontent.com/combiz/scFlow/blob/master/LICENSE.md
Please reload this pagehttps://patch-diff.githubusercontent.com/combiz/scFlow
Activityhttps://patch-diff.githubusercontent.com/combiz/scFlow/activity
57 starshttps://patch-diff.githubusercontent.com/combiz/scFlow/stargazers
6 watchinghttps://patch-diff.githubusercontent.com/combiz/scFlow/watchers
13 forkshttps://patch-diff.githubusercontent.com/combiz/scFlow/forks
Report repository https://patch-diff.githubusercontent.com/contact/report-content?content_url=https%3A%2F%2Fgithub.com%2Fcombiz%2FscFlow&report=combiz+%28user%29
Releaseshttps://patch-diff.githubusercontent.com/combiz/scFlow/releases
1 tags https://patch-diff.githubusercontent.com/combiz/scFlow/tags
Packages 0https://patch-diff.githubusercontent.com/users/combiz/packages?repo_name=scFlow
Please reload this pagehttps://patch-diff.githubusercontent.com/combiz/scFlow
Contributors 6https://patch-diff.githubusercontent.com/combiz/scFlow/graphs/contributors
Please reload this pagehttps://patch-diff.githubusercontent.com/combiz/scFlow
R 91.6% https://patch-diff.githubusercontent.com/combiz/scFlow/search?l=r
TeX 5.6% https://patch-diff.githubusercontent.com/combiz/scFlow/search?l=tex
HTML 1.4% https://patch-diff.githubusercontent.com/combiz/scFlow/search?l=html
Dockerfile 1.2% https://patch-diff.githubusercontent.com/combiz/scFlow/search?l=dockerfile
https://github.com
Termshttps://docs.github.com/site-policy/github-terms/github-terms-of-service
Privacyhttps://docs.github.com/site-policy/privacy-policies/github-privacy-statement
Securityhttps://github.com/security
Statushttps://www.githubstatus.com/
Communityhttps://github.community/
Docshttps://docs.github.com/
Contacthttps://support.github.com?tags=dotcom-footer

Viewport: width=device-width


URLs of crawlers that visited me.