René's URL Explorer Experiment


Title: GitHub - clinfo/DEFMap: DEFMap: Dynamics Extraction From cryo-em Map

Open Graph Title: GitHub - clinfo/DEFMap: DEFMap: Dynamics Extraction From cryo-em Map

X Title: GitHub - clinfo/DEFMap: DEFMap: Dynamics Extraction From cryo-em Map

Description: DEFMap: Dynamics Extraction From cryo-em Map. Contribute to clinfo/DEFMap development by creating an account on GitHub.

Open Graph Description: DEFMap: Dynamics Extraction From cryo-em Map. Contribute to clinfo/DEFMap development by creating an account on GitHub.

X Description: DEFMap: Dynamics Extraction From cryo-em Map. Contribute to clinfo/DEFMap development by creating an account on GitHub.

Mail addresses
shigeyuki.matsumoto@riken.jp
ishida.sho.nm@yokohama-cu.ac.jp

Opengraph URL: https://github.com/clinfo/DEFMap

X: @github

direct link

Domain: patch-diff.githubusercontent.com

route-pattern/:user_id/:repository
route-controllerfiles
route-actiondisambiguate
fetch-noncev2:a8ce2526-d54e-2953-26db-ac1cf9a1f42a
current-catalog-service-hashf3abb0cc802f3d7b95fc8762b94bdcb13bf39634c40c357301c4aa1d67a256fb
request-idCB50:267E4D:25B5E21:3263C26:69742307
html-safe-nonce2a8533d6296bbfa8ec7cf61fabb2332dc3b9b125f7491ebd5f8dfd97bad5cfe1
visitor-payloadeyJyZWZlcnJlciI6IiIsInJlcXVlc3RfaWQiOiJDQjUwOjI2N0U0RDoyNUI1RTIxOjMyNjNDMjY6Njk3NDIzMDciLCJ2aXNpdG9yX2lkIjoiNjcyMzczMjk2MjQ4NDE2NzQzMiIsInJlZ2lvbl9lZGdlIjoiaWFkIiwicmVnaW9uX3JlbmRlciI6ImlhZCJ9
visitor-hmac1375064aaddeef9ee53857d8f9345753ff850fe3b1d2cc5209ea3f3a73bc2f44
hovercard-subject-tagrepository:246480629
github-keyboard-shortcutsrepository,copilot
google-site-verificationApib7-x98H0j5cPqHWwSMm6dNU4GmODRoqxLiDzdx9I
octolytics-urlhttps://collector.github.com/github/collect
analytics-location//
fb:app_id1401488693436528
apple-itunes-appapp-id=1477376905, app-argument=https://github.com/clinfo/DEFMap
twitter:imagehttps://opengraph.githubassets.com/204399c65aadf9e4a359c68ab060901ddbe1aa1c764f45606fa316c24853665d/clinfo/DEFMap
twitter:cardsummary_large_image
og:imagehttps://opengraph.githubassets.com/204399c65aadf9e4a359c68ab060901ddbe1aa1c764f45606fa316c24853665d/clinfo/DEFMap
og:image:altDEFMap: Dynamics Extraction From cryo-em Map. Contribute to clinfo/DEFMap development by creating an account on GitHub.
og:image:width1200
og:image:height600
og:site_nameGitHub
og:typeobject
hostnamegithub.com
expected-hostnamegithub.com
None447dc9917c3d68d647a01abfdefe55ec7ee1785922136c1d8395dbb3ab6d57b9
turbo-cache-controlno-preview
go-importgithub.com/clinfo/DEFMap git https://github.com/clinfo/DEFMap.git
octolytics-dimension-user_id29702617
octolytics-dimension-user_loginclinfo
octolytics-dimension-repository_id246480629
octolytics-dimension-repository_nwoclinfo/DEFMap
octolytics-dimension-repository_publictrue
octolytics-dimension-repository_is_forkfalse
octolytics-dimension-repository_network_root_id246480629
octolytics-dimension-repository_network_root_nwoclinfo/DEFMap
turbo-body-classeslogged-out env-production page-responsive
disable-turbofalse
browser-stats-urlhttps://api.github.com/_private/browser/stats
browser-errors-urlhttps://api.github.com/_private/browser/errors
release8dad7bdfecbe3eaa97ac4e632d6b47e2b23e81d9
ui-targetfull
theme-color#1e2327
color-schemelight dark

Links:

Skip to contenthttps://patch-diff.githubusercontent.com/clinfo/DEFMap#start-of-content
https://patch-diff.githubusercontent.com/
Sign in https://patch-diff.githubusercontent.com/login?return_to=https%3A%2F%2Fgithub.com%2Fclinfo%2FDEFMap
GitHub CopilotWrite better code with AIhttps://github.com/features/copilot
GitHub SparkBuild and deploy intelligent appshttps://github.com/features/spark
GitHub ModelsManage and compare promptshttps://github.com/features/models
MCP RegistryNewIntegrate external toolshttps://github.com/mcp
ActionsAutomate any workflowhttps://github.com/features/actions
CodespacesInstant dev environmentshttps://github.com/features/codespaces
IssuesPlan and track workhttps://github.com/features/issues
Code ReviewManage code changeshttps://github.com/features/code-review
GitHub Advanced SecurityFind and fix vulnerabilitieshttps://github.com/security/advanced-security
Code securitySecure your code as you buildhttps://github.com/security/advanced-security/code-security
Secret protectionStop leaks before they starthttps://github.com/security/advanced-security/secret-protection
Why GitHubhttps://github.com/why-github
Documentationhttps://docs.github.com
Bloghttps://github.blog
Changeloghttps://github.blog/changelog
Marketplacehttps://github.com/marketplace
View all featureshttps://github.com/features
Enterpriseshttps://github.com/enterprise
Small and medium teamshttps://github.com/team
Startupshttps://github.com/enterprise/startups
Nonprofitshttps://github.com/solutions/industry/nonprofits
App Modernizationhttps://github.com/solutions/use-case/app-modernization
DevSecOpshttps://github.com/solutions/use-case/devsecops
DevOpshttps://github.com/solutions/use-case/devops
CI/CDhttps://github.com/solutions/use-case/ci-cd
View all use caseshttps://github.com/solutions/use-case
Healthcarehttps://github.com/solutions/industry/healthcare
Financial serviceshttps://github.com/solutions/industry/financial-services
Manufacturinghttps://github.com/solutions/industry/manufacturing
Governmenthttps://github.com/solutions/industry/government
View all industrieshttps://github.com/solutions/industry
View all solutionshttps://github.com/solutions
AIhttps://github.com/resources/articles?topic=ai
Software Developmenthttps://github.com/resources/articles?topic=software-development
DevOpshttps://github.com/resources/articles?topic=devops
Securityhttps://github.com/resources/articles?topic=security
View all topicshttps://github.com/resources/articles
Customer storieshttps://github.com/customer-stories
Events & webinarshttps://github.com/resources/events
Ebooks & reportshttps://github.com/resources/whitepapers
Business insightshttps://github.com/solutions/executive-insights
GitHub Skillshttps://skills.github.com
Documentationhttps://docs.github.com
Customer supporthttps://support.github.com
Community forumhttps://github.com/orgs/community/discussions
Trust centerhttps://github.com/trust-center
Partnershttps://github.com/partners
GitHub SponsorsFund open source developershttps://github.com/sponsors
Security Labhttps://securitylab.github.com
Maintainer Communityhttps://maintainers.github.com
Acceleratorhttps://github.com/accelerator
Archive Programhttps://archiveprogram.github.com
Topicshttps://github.com/topics
Trendinghttps://github.com/trending
Collectionshttps://github.com/collections
Enterprise platformAI-powered developer platformhttps://github.com/enterprise
GitHub Advanced SecurityEnterprise-grade security featureshttps://github.com/security/advanced-security
Copilot for BusinessEnterprise-grade AI featureshttps://github.com/features/copilot/copilot-business
Premium SupportEnterprise-grade 24/7 supporthttps://github.com/premium-support
Pricinghttps://github.com/pricing
Search syntax tipshttps://docs.github.com/search-github/github-code-search/understanding-github-code-search-syntax
documentationhttps://docs.github.com/search-github/github-code-search/understanding-github-code-search-syntax
Sign in https://patch-diff.githubusercontent.com/login?return_to=https%3A%2F%2Fgithub.com%2Fclinfo%2FDEFMap
Sign up https://patch-diff.githubusercontent.com/signup?ref_cta=Sign+up&ref_loc=header+logged+out&ref_page=%2F%3Cuser-name%3E%2F%3Crepo-name%3E&source=header-repo&source_repo=clinfo%2FDEFMap
Reloadhttps://patch-diff.githubusercontent.com/clinfo/DEFMap
Reloadhttps://patch-diff.githubusercontent.com/clinfo/DEFMap
Reloadhttps://patch-diff.githubusercontent.com/clinfo/DEFMap
clinfo https://patch-diff.githubusercontent.com/clinfo
DEFMaphttps://patch-diff.githubusercontent.com/clinfo/DEFMap
Notifications https://patch-diff.githubusercontent.com/login?return_to=%2Fclinfo%2FDEFMap
Fork 14 https://patch-diff.githubusercontent.com/login?return_to=%2Fclinfo%2FDEFMap
Star 27 https://patch-diff.githubusercontent.com/login?return_to=%2Fclinfo%2FDEFMap
MIT license https://patch-diff.githubusercontent.com/clinfo/DEFMap/blob/master/LICENSE
27 stars https://patch-diff.githubusercontent.com/clinfo/DEFMap/stargazers
14 forks https://patch-diff.githubusercontent.com/clinfo/DEFMap/forks
Branches https://patch-diff.githubusercontent.com/clinfo/DEFMap/branches
Tags https://patch-diff.githubusercontent.com/clinfo/DEFMap/tags
Activity https://patch-diff.githubusercontent.com/clinfo/DEFMap/activity
Star https://patch-diff.githubusercontent.com/login?return_to=%2Fclinfo%2FDEFMap
Notifications https://patch-diff.githubusercontent.com/login?return_to=%2Fclinfo%2FDEFMap
Code https://patch-diff.githubusercontent.com/clinfo/DEFMap
Issues 3 https://patch-diff.githubusercontent.com/clinfo/DEFMap/issues
Pull requests 0 https://patch-diff.githubusercontent.com/clinfo/DEFMap/pulls
Actions https://patch-diff.githubusercontent.com/clinfo/DEFMap/actions
Projects 0 https://patch-diff.githubusercontent.com/clinfo/DEFMap/projects
Security 0 https://patch-diff.githubusercontent.com/clinfo/DEFMap/security
Insights https://patch-diff.githubusercontent.com/clinfo/DEFMap/pulse
Code https://patch-diff.githubusercontent.com/clinfo/DEFMap
Issues https://patch-diff.githubusercontent.com/clinfo/DEFMap/issues
Pull requests https://patch-diff.githubusercontent.com/clinfo/DEFMap/pulls
Actions https://patch-diff.githubusercontent.com/clinfo/DEFMap/actions
Projects https://patch-diff.githubusercontent.com/clinfo/DEFMap/projects
Security https://patch-diff.githubusercontent.com/clinfo/DEFMap/security
Insights https://patch-diff.githubusercontent.com/clinfo/DEFMap/pulse
Brancheshttps://patch-diff.githubusercontent.com/clinfo/DEFMap/branches
Tagshttps://patch-diff.githubusercontent.com/clinfo/DEFMap/tags
https://patch-diff.githubusercontent.com/clinfo/DEFMap/branches
https://patch-diff.githubusercontent.com/clinfo/DEFMap/tags
23 Commitshttps://patch-diff.githubusercontent.com/clinfo/DEFMap/commits/master/
https://patch-diff.githubusercontent.com/clinfo/DEFMap/commits/master/
.github/ISSUE_TEMPLATEhttps://patch-diff.githubusercontent.com/clinfo/DEFMap/tree/master/.github/ISSUE_TEMPLATE
.github/ISSUE_TEMPLATEhttps://patch-diff.githubusercontent.com/clinfo/DEFMap/tree/master/.github/ISSUE_TEMPLATE
datahttps://patch-diff.githubusercontent.com/clinfo/DEFMap/tree/master/data
datahttps://patch-diff.githubusercontent.com/clinfo/DEFMap/tree/master/data
dochttps://patch-diff.githubusercontent.com/clinfo/DEFMap/tree/master/doc
dochttps://patch-diff.githubusercontent.com/clinfo/DEFMap/tree/master/doc
imghttps://patch-diff.githubusercontent.com/clinfo/DEFMap/tree/master/img
imghttps://patch-diff.githubusercontent.com/clinfo/DEFMap/tree/master/img
modelhttps://patch-diff.githubusercontent.com/clinfo/DEFMap/tree/master/model
modelhttps://patch-diff.githubusercontent.com/clinfo/DEFMap/tree/master/model
postprocessinghttps://patch-diff.githubusercontent.com/clinfo/DEFMap/tree/master/postprocessing
postprocessinghttps://patch-diff.githubusercontent.com/clinfo/DEFMap/tree/master/postprocessing
preprocessinghttps://patch-diff.githubusercontent.com/clinfo/DEFMap/tree/master/preprocessing
preprocessinghttps://patch-diff.githubusercontent.com/clinfo/DEFMap/tree/master/preprocessing
resulthttps://patch-diff.githubusercontent.com/clinfo/DEFMap/tree/master/result
resulthttps://patch-diff.githubusercontent.com/clinfo/DEFMap/tree/master/result
.gitignorehttps://patch-diff.githubusercontent.com/clinfo/DEFMap/blob/master/.gitignore
.gitignorehttps://patch-diff.githubusercontent.com/clinfo/DEFMap/blob/master/.gitignore
3dcnn_main.pyhttps://patch-diff.githubusercontent.com/clinfo/DEFMap/blob/master/3dcnn_main.py
3dcnn_main.pyhttps://patch-diff.githubusercontent.com/clinfo/DEFMap/blob/master/3dcnn_main.py
Dockerfilehttps://patch-diff.githubusercontent.com/clinfo/DEFMap/blob/master/Dockerfile
Dockerfilehttps://patch-diff.githubusercontent.com/clinfo/DEFMap/blob/master/Dockerfile
LICENSEhttps://patch-diff.githubusercontent.com/clinfo/DEFMap/blob/master/LICENSE
LICENSEhttps://patch-diff.githubusercontent.com/clinfo/DEFMap/blob/master/LICENSE
README.mdhttps://patch-diff.githubusercontent.com/clinfo/DEFMap/blob/master/README.md
README.mdhttps://patch-diff.githubusercontent.com/clinfo/DEFMap/blob/master/README.md
__init__.pyhttps://patch-diff.githubusercontent.com/clinfo/DEFMap/blob/master/__init__.py
__init__.pyhttps://patch-diff.githubusercontent.com/clinfo/DEFMap/blob/master/__init__.py
fig_utils.pyhttps://patch-diff.githubusercontent.com/clinfo/DEFMap/blob/master/fig_utils.py
fig_utils.pyhttps://patch-diff.githubusercontent.com/clinfo/DEFMap/blob/master/fig_utils.py
util.pyhttps://patch-diff.githubusercontent.com/clinfo/DEFMap/blob/master/util.py
util.pyhttps://patch-diff.githubusercontent.com/clinfo/DEFMap/blob/master/util.py
READMEhttps://patch-diff.githubusercontent.com/clinfo/DEFMap
MIT licensehttps://patch-diff.githubusercontent.com/clinfo/DEFMap
https://patch-diff.githubusercontent.com/clinfo/DEFMap#defmap-dynamics-extraction-from-cryo-em-map
https://patch-diff.githubusercontent.com/clinfo/DEFMap/blob/master/img/DEFMap_summary.jpg
ColabDEFMaphttps://colab.research.google.com/gist/sishida21/a75503ad30aa6f11f99e7d2af8467727/colabdefmap-ipynb.ipynb
https://patch-diff.githubusercontent.com/clinfo/DEFMap#dependency
https://patch-diff.githubusercontent.com/clinfo/DEFMap#environment
CUDA Toolkithttps://developer.nvidia.com/cuda-10.0-download-archive?target_os=Linux&target_arch=x86_64&target_distro=Ubuntu&target_version=1804&target_type=runfilelocal
https://patch-diff.githubusercontent.com/clinfo/DEFMap#package
htmdhttps://software.acellera.com/academic-download-htmd.html
EMAN2https://blake.bcm.edu/emanwiki/EMAN2
UCSF Chimerahttps://www.cgl.ucsf.edu/chimera/
https://patch-diff.githubusercontent.com/clinfo/DEFMap#hardware-requirements
https://patch-diff.githubusercontent.com/clinfo/DEFMap#setup
linkhttps://patch-diff.githubusercontent.com/clinfo/DEFMap/blob/master/doc/setup.md
linkhttps://patch-diff.githubusercontent.com/clinfo/DEFMap/blob/master/doc/docker.md
https://patch-diff.githubusercontent.com/clinfo/DEFMap#example-usage
https://patch-diff.githubusercontent.com/clinfo/DEFMap#usage-1-dynamics-prediciton-and-voxel-visualization
UCSF Chimerahttps://www.cgl.ucsf.edu/chimera/
https://patch-diff.githubusercontent.com/clinfo/DEFMap/blob/master/img/dynamics_voxels.jpg
https://patch-diff.githubusercontent.com/clinfo/DEFMap#usage-2-dynamics-prediction-and-the-mapping-onto-atomic-model
https://patch-diff.githubusercontent.com/clinfo/DEFMap/blob/master/img/dynamics_mapped_protein.jpg
https://patch-diff.githubusercontent.com/clinfo/DEFMap#usage-3-dynamics-prediction-using-models-trained-by-different-resolutions
https://patch-diff.githubusercontent.com/clinfo/DEFMap#license
LICENSEhttps://patch-diff.githubusercontent.com/clinfo/DEFMap/blob/master/LICENSE
https://patch-diff.githubusercontent.com/clinfo/DEFMap#authors
https://patch-diff.githubusercontent.com/clinfo/DEFMap#reference
Readme https://patch-diff.githubusercontent.com/clinfo/DEFMap#readme-ov-file
MIT license https://patch-diff.githubusercontent.com/clinfo/DEFMap#MIT-1-ov-file
Please reload this pagehttps://patch-diff.githubusercontent.com/clinfo/DEFMap
Activityhttps://patch-diff.githubusercontent.com/clinfo/DEFMap/activity
Custom propertieshttps://patch-diff.githubusercontent.com/clinfo/DEFMap/custom-properties
27 starshttps://patch-diff.githubusercontent.com/clinfo/DEFMap/stargazers
6 watchinghttps://patch-diff.githubusercontent.com/clinfo/DEFMap/watchers
14 forkshttps://patch-diff.githubusercontent.com/clinfo/DEFMap/forks
Report repository https://patch-diff.githubusercontent.com/contact/report-content?content_url=https%3A%2F%2Fgithub.com%2Fclinfo%2FDEFMap&report=clinfo+%28user%29
Releases 2https://patch-diff.githubusercontent.com/clinfo/DEFMap/releases
release v1.0.1 Latest Dec 11, 2020 https://patch-diff.githubusercontent.com/clinfo/DEFMap/releases/tag/v1.0.1
+ 1 releasehttps://patch-diff.githubusercontent.com/clinfo/DEFMap/releases
Packages 0https://patch-diff.githubusercontent.com/orgs/clinfo/packages?repo_name=DEFMap
Python 97.3% https://patch-diff.githubusercontent.com/clinfo/DEFMap/search?l=python
Dockerfile 2.7% https://patch-diff.githubusercontent.com/clinfo/DEFMap/search?l=dockerfile
https://github.com
Termshttps://docs.github.com/site-policy/github-terms/github-terms-of-service
Privacyhttps://docs.github.com/site-policy/privacy-policies/github-privacy-statement
Securityhttps://github.com/security
Statushttps://www.githubstatus.com/
Communityhttps://github.community/
Docshttps://docs.github.com/
Contacthttps://support.github.com?tags=dotcom-footer

Viewport: width=device-width


URLs of crawlers that visited me.