René's URL Explorer Experiment


Title: GitHub - charles-plessy/tutorial: Various tutorials on how to analyse transcriptomic data.

Open Graph Title: GitHub - charles-plessy/tutorial: Various tutorials on how to analyse transcriptomic data.

X Title: GitHub - charles-plessy/tutorial: Various tutorials on how to analyse transcriptomic data.

Description: Various tutorials on how to analyse transcriptomic data. - charles-plessy/tutorial

Open Graph Description: Various tutorials on how to analyse transcriptomic data. - charles-plessy/tutorial

X Description: Various tutorials on how to analyse transcriptomic data. - charles-plessy/tutorial

Opengraph URL: https://github.com/charles-plessy/tutorial

X: @github

direct link

Domain: patch-diff.githubusercontent.com

route-pattern/:user_id/:repository
route-controllerfiles
route-actiondisambiguate
fetch-noncev2:81be7f0b-730a-1727-5bc5-f653325bcfda
current-catalog-service-hashf3abb0cc802f3d7b95fc8762b94bdcb13bf39634c40c357301c4aa1d67a256fb
request-idB188:38DCC4:1FB3B7B:2A8CBD5:698DA036
html-safe-noncea854e8fe9ee3f905fb19a7df010631cc140f6a724f3411df02c227ead336754f
visitor-payloadeyJyZWZlcnJlciI6IiIsInJlcXVlc3RfaWQiOiJCMTg4OjM4RENDNDoxRkIzQjdCOjJBOENCRDU6Njk4REEwMzYiLCJ2aXNpdG9yX2lkIjoiMjg2ODA0Njk1ODY1MTM1MTA5NCIsInJlZ2lvbl9lZGdlIjoiaWFkIiwicmVnaW9uX3JlbmRlciI6ImlhZCJ9
visitor-hmace75700fb1f944cd08ba25ae4082ae025232d488d4daf1995b8ea627829ea2b31
hovercard-subject-tagrepository:13405579
github-keyboard-shortcutsrepository,copilot
google-site-verificationApib7-x98H0j5cPqHWwSMm6dNU4GmODRoqxLiDzdx9I
octolytics-urlhttps://collector.github.com/github/collect
analytics-location//
fb:app_id1401488693436528
apple-itunes-appapp-id=1477376905, app-argument=https://github.com/charles-plessy/tutorial
twitter:imagehttps://opengraph.githubassets.com/a087c6053f2edfa7dc034bd8b97582dde25b887249bb0a0e169dab0f8f6dc55a/charles-plessy/tutorial
twitter:cardsummary_large_image
og:imagehttps://opengraph.githubassets.com/a087c6053f2edfa7dc034bd8b97582dde25b887249bb0a0e169dab0f8f6dc55a/charles-plessy/tutorial
og:image:altVarious tutorials on how to analyse transcriptomic data. - charles-plessy/tutorial
og:image:width1200
og:image:height600
og:site_nameGitHub
og:typeobject
hostnamegithub.com
expected-hostnamegithub.com
None8c7947c0c592efeab6162b9909ad11fa43bff8b0cb5ff43273dc25e41979d43e
turbo-cache-controlno-preview
go-importgithub.com/charles-plessy/tutorial git https://github.com/charles-plessy/tutorial.git
octolytics-dimension-user_id1834905
octolytics-dimension-user_logincharles-plessy
octolytics-dimension-repository_id13405579
octolytics-dimension-repository_nwocharles-plessy/tutorial
octolytics-dimension-repository_publictrue
octolytics-dimension-repository_is_forkfalse
octolytics-dimension-repository_network_root_id13405579
octolytics-dimension-repository_network_root_nwocharles-plessy/tutorial
turbo-body-classeslogged-out env-production page-responsive
disable-turbofalse
browser-stats-urlhttps://api.github.com/_private/browser/stats
browser-errors-urlhttps://api.github.com/_private/browser/errors
release0a5dfe0647d2c1d95bb2903fa058b2543240a029
ui-targetfull
theme-color#1e2327
color-schemelight dark

Links:

Skip to contenthttps://patch-diff.githubusercontent.com/charles-plessy/tutorial#start-of-content
https://patch-diff.githubusercontent.com/
Sign in https://patch-diff.githubusercontent.com/login?return_to=https%3A%2F%2Fgithub.com%2Fcharles-plessy%2Ftutorial
GitHub CopilotWrite better code with AIhttps://github.com/features/copilot
GitHub SparkBuild and deploy intelligent appshttps://github.com/features/spark
GitHub ModelsManage and compare promptshttps://github.com/features/models
MCP RegistryNewIntegrate external toolshttps://github.com/mcp
ActionsAutomate any workflowhttps://github.com/features/actions
CodespacesInstant dev environmentshttps://github.com/features/codespaces
IssuesPlan and track workhttps://github.com/features/issues
Code ReviewManage code changeshttps://github.com/features/code-review
GitHub Advanced SecurityFind and fix vulnerabilitieshttps://github.com/security/advanced-security
Code securitySecure your code as you buildhttps://github.com/security/advanced-security/code-security
Secret protectionStop leaks before they starthttps://github.com/security/advanced-security/secret-protection
Why GitHubhttps://github.com/why-github
Documentationhttps://docs.github.com
Bloghttps://github.blog
Changeloghttps://github.blog/changelog
Marketplacehttps://github.com/marketplace
View all featureshttps://github.com/features
Enterpriseshttps://github.com/enterprise
Small and medium teamshttps://github.com/team
Startupshttps://github.com/enterprise/startups
Nonprofitshttps://github.com/solutions/industry/nonprofits
App Modernizationhttps://github.com/solutions/use-case/app-modernization
DevSecOpshttps://github.com/solutions/use-case/devsecops
DevOpshttps://github.com/solutions/use-case/devops
CI/CDhttps://github.com/solutions/use-case/ci-cd
View all use caseshttps://github.com/solutions/use-case
Healthcarehttps://github.com/solutions/industry/healthcare
Financial serviceshttps://github.com/solutions/industry/financial-services
Manufacturinghttps://github.com/solutions/industry/manufacturing
Governmenthttps://github.com/solutions/industry/government
View all industrieshttps://github.com/solutions/industry
View all solutionshttps://github.com/solutions
AIhttps://github.com/resources/articles?topic=ai
Software Developmenthttps://github.com/resources/articles?topic=software-development
DevOpshttps://github.com/resources/articles?topic=devops
Securityhttps://github.com/resources/articles?topic=security
View all topicshttps://github.com/resources/articles
Customer storieshttps://github.com/customer-stories
Events & webinarshttps://github.com/resources/events
Ebooks & reportshttps://github.com/resources/whitepapers
Business insightshttps://github.com/solutions/executive-insights
GitHub Skillshttps://skills.github.com
Documentationhttps://docs.github.com
Customer supporthttps://support.github.com
Community forumhttps://github.com/orgs/community/discussions
Trust centerhttps://github.com/trust-center
Partnershttps://github.com/partners
GitHub SponsorsFund open source developershttps://github.com/sponsors
Security Labhttps://securitylab.github.com
Maintainer Communityhttps://maintainers.github.com
Acceleratorhttps://github.com/accelerator
Archive Programhttps://archiveprogram.github.com
Topicshttps://github.com/topics
Trendinghttps://github.com/trending
Collectionshttps://github.com/collections
Enterprise platformAI-powered developer platformhttps://github.com/enterprise
GitHub Advanced SecurityEnterprise-grade security featureshttps://github.com/security/advanced-security
Copilot for BusinessEnterprise-grade AI featureshttps://github.com/features/copilot/copilot-business
Premium SupportEnterprise-grade 24/7 supporthttps://github.com/premium-support
Pricinghttps://github.com/pricing
Search syntax tipshttps://docs.github.com/search-github/github-code-search/understanding-github-code-search-syntax
documentationhttps://docs.github.com/search-github/github-code-search/understanding-github-code-search-syntax
Sign in https://patch-diff.githubusercontent.com/login?return_to=https%3A%2F%2Fgithub.com%2Fcharles-plessy%2Ftutorial
Sign up https://patch-diff.githubusercontent.com/signup?ref_cta=Sign+up&ref_loc=header+logged+out&ref_page=%2F%3Cuser-name%3E%2F%3Crepo-name%3E&source=header-repo&source_repo=charles-plessy%2Ftutorial
Reloadhttps://patch-diff.githubusercontent.com/charles-plessy/tutorial
Reloadhttps://patch-diff.githubusercontent.com/charles-plessy/tutorial
Reloadhttps://patch-diff.githubusercontent.com/charles-plessy/tutorial
charles-plessy https://patch-diff.githubusercontent.com/charles-plessy
tutorialhttps://patch-diff.githubusercontent.com/charles-plessy/tutorial
Notifications https://patch-diff.githubusercontent.com/login?return_to=%2Fcharles-plessy%2Ftutorial
Fork 1 https://patch-diff.githubusercontent.com/login?return_to=%2Fcharles-plessy%2Ftutorial
Star 9 https://patch-diff.githubusercontent.com/login?return_to=%2Fcharles-plessy%2Ftutorial
9 stars https://patch-diff.githubusercontent.com/charles-plessy/tutorial/stargazers
1 fork https://patch-diff.githubusercontent.com/charles-plessy/tutorial/forks
Branches https://patch-diff.githubusercontent.com/charles-plessy/tutorial/branches
Tags https://patch-diff.githubusercontent.com/charles-plessy/tutorial/tags
Activity https://patch-diff.githubusercontent.com/charles-plessy/tutorial/activity
Star https://patch-diff.githubusercontent.com/login?return_to=%2Fcharles-plessy%2Ftutorial
Notifications https://patch-diff.githubusercontent.com/login?return_to=%2Fcharles-plessy%2Ftutorial
Code https://patch-diff.githubusercontent.com/charles-plessy/tutorial
Issues 0 https://patch-diff.githubusercontent.com/charles-plessy/tutorial/issues
Pull requests 0 https://patch-diff.githubusercontent.com/charles-plessy/tutorial/pulls
Actions https://patch-diff.githubusercontent.com/charles-plessy/tutorial/actions
Projects 0 https://patch-diff.githubusercontent.com/charles-plessy/tutorial/projects
Wiki https://patch-diff.githubusercontent.com/charles-plessy/tutorial/wiki
Security 0 https://patch-diff.githubusercontent.com/charles-plessy/tutorial/security
Insights https://patch-diff.githubusercontent.com/charles-plessy/tutorial/pulse
Code https://patch-diff.githubusercontent.com/charles-plessy/tutorial
Issues https://patch-diff.githubusercontent.com/charles-plessy/tutorial/issues
Pull requests https://patch-diff.githubusercontent.com/charles-plessy/tutorial/pulls
Actions https://patch-diff.githubusercontent.com/charles-plessy/tutorial/actions
Projects https://patch-diff.githubusercontent.com/charles-plessy/tutorial/projects
Wiki https://patch-diff.githubusercontent.com/charles-plessy/tutorial/wiki
Security https://patch-diff.githubusercontent.com/charles-plessy/tutorial/security
Insights https://patch-diff.githubusercontent.com/charles-plessy/tutorial/pulse
Brancheshttps://patch-diff.githubusercontent.com/charles-plessy/tutorial/branches
Tagshttps://patch-diff.githubusercontent.com/charles-plessy/tutorial/tags
https://patch-diff.githubusercontent.com/charles-plessy/tutorial/branches
https://patch-diff.githubusercontent.com/charles-plessy/tutorial/tags
93 Commitshttps://patch-diff.githubusercontent.com/charles-plessy/tutorial/commits/master/
https://patch-diff.githubusercontent.com/charles-plessy/tutorial/commits/master/
CAGE_differential_analysis1https://patch-diff.githubusercontent.com/charles-plessy/tutorial/tree/master/CAGE_differential_analysis1
CAGE_differential_analysis1https://patch-diff.githubusercontent.com/charles-plessy/tutorial/tree/master/CAGE_differential_analysis1
CAGE_differential_analysis2https://patch-diff.githubusercontent.com/charles-plessy/tutorial/tree/master/CAGE_differential_analysis2
CAGE_differential_analysis2https://patch-diff.githubusercontent.com/charles-plessy/tutorial/tree/master/CAGE_differential_analysis2
CAGE_normalisation_by_subsamplinghttps://patch-diff.githubusercontent.com/charles-plessy/tutorial/tree/master/CAGE_normalisation_by_subsampling
CAGE_normalisation_by_subsamplinghttps://patch-diff.githubusercontent.com/charles-plessy/tutorial/tree/master/CAGE_normalisation_by_subsampling
Deep-RACE1https://patch-diff.githubusercontent.com/charles-plessy/tutorial/tree/master/Deep-RACE1
Deep-RACE1https://patch-diff.githubusercontent.com/charles-plessy/tutorial/tree/master/Deep-RACE1
Demultiplexinghttps://patch-diff.githubusercontent.com/charles-plessy/tutorial/tree/master/Demultiplexing
Demultiplexinghttps://patch-diff.githubusercontent.com/charles-plessy/tutorial/tree/master/Demultiplexing
FANTOM5_DPI_BED_file_with_annotationhttps://patch-diff.githubusercontent.com/charles-plessy/tutorial/tree/master/FANTOM5_DPI_BED_file_with_annotation
FANTOM5_DPI_BED_file_with_annotationhttps://patch-diff.githubusercontent.com/charles-plessy/tutorial/tree/master/FANTOM5_DPI_BED_file_with_annotation
FANTOM5_DPI_peak_shapehttps://patch-diff.githubusercontent.com/charles-plessy/tutorial/tree/master/FANTOM5_DPI_peak_shape
FANTOM5_DPI_peak_shapehttps://patch-diff.githubusercontent.com/charles-plessy/tutorial/tree/master/FANTOM5_DPI_peak_shape
FANTOM5_SDRF_fileshttps://patch-diff.githubusercontent.com/charles-plessy/tutorial/tree/master/FANTOM5_SDRF_files
FANTOM5_SDRF_fileshttps://patch-diff.githubusercontent.com/charles-plessy/tutorial/tree/master/FANTOM5_SDRF_files
Hierarchical_clusteringhttps://patch-diff.githubusercontent.com/charles-plessy/tutorial/tree/master/Hierarchical_clustering
Hierarchical_clusteringhttps://patch-diff.githubusercontent.com/charles-plessy/tutorial/tree/master/Hierarchical_clustering
Makefilehttps://patch-diff.githubusercontent.com/charles-plessy/tutorial/blob/master/Makefile
Makefilehttps://patch-diff.githubusercontent.com/charles-plessy/tutorial/blob/master/Makefile
README.htmlhttps://patch-diff.githubusercontent.com/charles-plessy/tutorial/blob/master/README.html
README.htmlhttps://patch-diff.githubusercontent.com/charles-plessy/tutorial/blob/master/README.html
README.mdhttps://patch-diff.githubusercontent.com/charles-plessy/tutorial/blob/master/README.md
README.mdhttps://patch-diff.githubusercontent.com/charles-plessy/tutorial/blob/master/README.md
todohttps://patch-diff.githubusercontent.com/charles-plessy/tutorial/blob/master/todo
todohttps://patch-diff.githubusercontent.com/charles-plessy/tutorial/blob/master/todo
READMEhttps://patch-diff.githubusercontent.com/charles-plessy/tutorial
https://patch-diff.githubusercontent.com/charles-plessy/tutorial#tutorials-for-analysing-cage-and-deep-race-data
CAGEhttps://en.wikipedia.org/wiki/Cap_analysis_gene_expression
Deep-RACEhttps://patch-diff.githubusercontent.com/charles-plessy/tutorial/blob/master/Deep-RACE1/Deep-RACE1.md
CAGE differential analysis 1https://patch-diff.githubusercontent.com/charles-plessy/tutorial/blob/master/CAGE_differential_analysis1/analysis.md
CAGE differential analysis 2https://patch-diff.githubusercontent.com/charles-plessy/tutorial/blob/master/CAGE_differential_analysis2/analysis.md
Simple use of FANTOM5 SDRF fileshttps://patch-diff.githubusercontent.com/charles-plessy/tutorial/blob/master/FANTOM5_SDRF_files/sdrf.md
Normalisation of CAGE libraries by sub-samplinghttps://patch-diff.githubusercontent.com/charles-plessy/tutorial/blob/master/CAGE_normalisation_by_subsampling/subsampling.md
Demultiplex nanoCAGE data using TagDust 2https://patch-diff.githubusercontent.com/charles-plessy/tutorial/blob/master/Demultiplexing/Demultiplexing.md
The Linux Command Linehttps://linuxcommand.org/tlcl.php
no starch presshttps://nostarch.com/tlcl.htm
missing semseterhttps://missing.csail.mit.edu/
Debianhttps://www.debian.org
stackoverflowhttps://stackoverflow.com/questions/16366986/adding-bin-directory-in-your-path
tagdusthttp://genome.gsc.riken.jp/osc/english/software/src/tagdust.tgz
source codehttps://en.wikipedia.org/wiki/Source_code
https://patch-diff.githubusercontent.com/charles-plessy/tutorial#frequent-problems
https://patch-diff.githubusercontent.com/charles-plessy/tutorial#command-not-found
The Linux Command Linehttps://linuxcommand.org/tlcl.php
The Linux Command Linehttps://linuxcommand.org/tlcl.php
https://patch-diff.githubusercontent.com/charles-plessy/tutorial#what-is-that-sponge-
moreutilshttps://joeyh.name/code/moreutils/
moreutilshttps://patch-diff.githubusercontent.com/charles-plessy/tutorial/blob/master/packages.debian.org/moreutils
tutorial https://patch-diff.githubusercontent.com/topics/tutorial
transcriptome https://patch-diff.githubusercontent.com/topics/transcriptome
edger https://patch-diff.githubusercontent.com/topics/edger
cage https://patch-diff.githubusercontent.com/topics/cage
fantom https://patch-diff.githubusercontent.com/topics/fantom
Readme https://patch-diff.githubusercontent.com/charles-plessy/tutorial#readme-ov-file
Please reload this pagehttps://patch-diff.githubusercontent.com/charles-plessy/tutorial
Activityhttps://patch-diff.githubusercontent.com/charles-plessy/tutorial/activity
9 starshttps://patch-diff.githubusercontent.com/charles-plessy/tutorial/stargazers
1 watchinghttps://patch-diff.githubusercontent.com/charles-plessy/tutorial/watchers
1 forkhttps://patch-diff.githubusercontent.com/charles-plessy/tutorial/forks
Report repository https://patch-diff.githubusercontent.com/contact/report-content?content_url=https%3A%2F%2Fgithub.com%2Fcharles-plessy%2Ftutorial&report=charles-plessy+%28user%29
Releaseshttps://patch-diff.githubusercontent.com/charles-plessy/tutorial/releases
Packages 0https://patch-diff.githubusercontent.com/users/charles-plessy/packages?repo_name=tutorial
HTML 100.0% https://patch-diff.githubusercontent.com/charles-plessy/tutorial/search?l=html
https://github.com
Termshttps://docs.github.com/site-policy/github-terms/github-terms-of-service
Privacyhttps://docs.github.com/site-policy/privacy-policies/github-privacy-statement
Securityhttps://github.com/security
Statushttps://www.githubstatus.com/
Communityhttps://github.community/
Docshttps://docs.github.com/
Contacthttps://support.github.com?tags=dotcom-footer

Viewport: width=device-width


URLs of crawlers that visited me.