René's URL Explorer Experiment


Title: Machine Learning for Integrative Genomics lab · GitHub

Open Graph Title: Machine Learning for Integrative Genomics lab

X Title: Machine Learning for Integrative Genomics lab

Description: Machine Learning for Integrative Genomics lab has 25 repositories available. Follow their code on GitHub.

Open Graph Description: Machine Learning for Integrative Genomics lab has 25 repositories available. Follow their code on GitHub.

X Description: Machine Learning for Integrative Genomics lab has 25 repositories available. Follow their code on GitHub.

Opengraph URL: https://github.com/cantinilab

X: @github

direct link

Domain: patch-diff.githubusercontent.com

route-pattern/:user_id(.:format)
route-controllerprofiles
route-actionshow
fetch-noncev2:4c81effc-d0ac-a7d3-caaf-105c2febd8c3
current-catalog-service-hash4a1c50a83cf6cc4b55b6b9c53e553e3f847c876b87fb333f71f5d05db8f1a7db
request-id9466:3ED45B:A852533:DF5EC8D:698C2708
html-safe-noncee632c103d15154c85b99569fe4209ee04d80b85a7ff49018a8d698cca239227e
visitor-payloadeyJyZWZlcnJlciI6IiIsInJlcXVlc3RfaWQiOiI5NDY2OjNFRDQ1QjpBODUyNTMzOkRGNUVDOEQ6Njk4QzI3MDgiLCJ2aXNpdG9yX2lkIjoiODQ4Njg2MDk3MDcxNDIxMjEwNCIsInJlZ2lvbl9lZGdlIjoiaWFkIiwicmVnaW9uX3JlbmRlciI6ImlhZCJ9
visitor-hmacf334d27b927705186543c421aa5ed3aee7cd44bc2f705a4fae675bb8c7419e4c
hovercard-subject-tagorganization:116362493
github-keyboard-shortcutscopilot
google-site-verificationApib7-x98H0j5cPqHWwSMm6dNU4GmODRoqxLiDzdx9I
octolytics-urlhttps://collector.github.com/github/collect
analytics-location/
fb:app_id1401488693436528
apple-itunes-appapp-id=1477376905, app-argument=https://github.com/cantinilab
twitter:imagehttps://avatars.githubusercontent.com/u/116362493?s=280&v=4
twitter:cardsummary_large_image
og:imagehttps://avatars.githubusercontent.com/u/116362493?s=280&v=4
og:image:altMachine Learning for Integrative Genomics lab has 25 repositories available. Follow their code on GitHub.
og:site_nameGitHub
og:typeprofile
profile:usernamecantinilab
hostnamegithub.com
expected-hostnamegithub.com
None640eeb7b6ff4d8d106235d228c0c286e82592d4d2403227b5b2b4fc5832297a4
turbo-cache-controlno-preview
turbo-body-classeslogged-out env-production page-responsive
disable-turbofalse
browser-stats-urlhttps://api.github.com/_private/browser/stats
browser-errors-urlhttps://api.github.com/_private/browser/errors
release3d444f0a47beeeac94cddbb51c91ab408befe8d4
ui-targetfull
theme-color#1e2327
color-schemelight dark

Links:

Skip to contenthttps://patch-diff.githubusercontent.com/cantinilab#start-of-content
https://patch-diff.githubusercontent.com/
Sign in https://patch-diff.githubusercontent.com/login?return_to=https%3A%2F%2Fgithub.com%2Fcantinilab
cantinilabhttps://patch-diff.githubusercontent.com/cantinilab
GitHub CopilotWrite better code with AIhttps://github.com/features/copilot
GitHub SparkBuild and deploy intelligent appshttps://github.com/features/spark
GitHub ModelsManage and compare promptshttps://github.com/features/models
MCP RegistryNewIntegrate external toolshttps://github.com/mcp
ActionsAutomate any workflowhttps://github.com/features/actions
CodespacesInstant dev environmentshttps://github.com/features/codespaces
IssuesPlan and track workhttps://github.com/features/issues
Code ReviewManage code changeshttps://github.com/features/code-review
GitHub Advanced SecurityFind and fix vulnerabilitieshttps://github.com/security/advanced-security
Code securitySecure your code as you buildhttps://github.com/security/advanced-security/code-security
Secret protectionStop leaks before they starthttps://github.com/security/advanced-security/secret-protection
Why GitHubhttps://github.com/why-github
Documentationhttps://docs.github.com
Bloghttps://github.blog
Changeloghttps://github.blog/changelog
Marketplacehttps://github.com/marketplace
View all featureshttps://github.com/features
Enterpriseshttps://github.com/enterprise
Small and medium teamshttps://github.com/team
Startupshttps://github.com/enterprise/startups
Nonprofitshttps://github.com/solutions/industry/nonprofits
App Modernizationhttps://github.com/solutions/use-case/app-modernization
DevSecOpshttps://github.com/solutions/use-case/devsecops
DevOpshttps://github.com/solutions/use-case/devops
CI/CDhttps://github.com/solutions/use-case/ci-cd
View all use caseshttps://github.com/solutions/use-case
Healthcarehttps://github.com/solutions/industry/healthcare
Financial serviceshttps://github.com/solutions/industry/financial-services
Manufacturinghttps://github.com/solutions/industry/manufacturing
Governmenthttps://github.com/solutions/industry/government
View all industrieshttps://github.com/solutions/industry
View all solutionshttps://github.com/solutions
AIhttps://github.com/resources/articles?topic=ai
Software Developmenthttps://github.com/resources/articles?topic=software-development
DevOpshttps://github.com/resources/articles?topic=devops
Securityhttps://github.com/resources/articles?topic=security
View all topicshttps://github.com/resources/articles
Customer storieshttps://github.com/customer-stories
Events & webinarshttps://github.com/resources/events
Ebooks & reportshttps://github.com/resources/whitepapers
Business insightshttps://github.com/solutions/executive-insights
GitHub Skillshttps://skills.github.com
Documentationhttps://docs.github.com
Customer supporthttps://support.github.com
Community forumhttps://github.com/orgs/community/discussions
Trust centerhttps://github.com/trust-center
Partnershttps://github.com/partners
GitHub SponsorsFund open source developershttps://github.com/sponsors
Security Labhttps://securitylab.github.com
Maintainer Communityhttps://maintainers.github.com
Acceleratorhttps://github.com/accelerator
Archive Programhttps://archiveprogram.github.com
Topicshttps://github.com/topics
Trendinghttps://github.com/trending
Collectionshttps://github.com/collections
Enterprise platformAI-powered developer platformhttps://github.com/enterprise
GitHub Advanced SecurityEnterprise-grade security featureshttps://github.com/security/advanced-security
Copilot for BusinessEnterprise-grade AI featureshttps://github.com/features/copilot/copilot-business
Premium SupportEnterprise-grade 24/7 supporthttps://github.com/premium-support
Pricinghttps://github.com/pricing
Search syntax tipshttps://docs.github.com/search-github/github-code-search/understanding-github-code-search-syntax
documentationhttps://docs.github.com/search-github/github-code-search/understanding-github-code-search-syntax
Sign in https://patch-diff.githubusercontent.com/login?return_to=https%3A%2F%2Fgithub.com%2Fcantinilab
Sign up https://patch-diff.githubusercontent.com/signup?ref_cta=Sign+up&ref_loc=header+logged+out&ref_page=%2F%3Corg-login%3E&source=header
Reloadhttps://patch-diff.githubusercontent.com/cantinilab
Reloadhttps://patch-diff.githubusercontent.com/cantinilab
Reloadhttps://patch-diff.githubusercontent.com/cantinilab
88 followers https://patch-diff.githubusercontent.com/orgs/cantinilab/followers
Overview https://patch-diff.githubusercontent.com/cantinilab
Repositories https://patch-diff.githubusercontent.com/orgs/cantinilab/repositories
Projects https://patch-diff.githubusercontent.com/orgs/cantinilab/projects
Packages https://patch-diff.githubusercontent.com/orgs/cantinilab/packages
People https://patch-diff.githubusercontent.com/orgs/cantinilab/people
Overviewhttps://patch-diff.githubusercontent.com/cantinilab
Repositorieshttps://patch-diff.githubusercontent.com/orgs/cantinilab/repositories
Projectshttps://patch-diff.githubusercontent.com/orgs/cantinilab/projects
Packageshttps://patch-diff.githubusercontent.com/orgs/cantinilab/packages
Peoplehttps://patch-diff.githubusercontent.com/orgs/cantinilab/people
README.mdhttps://patch-diff.githubusercontent.com/cantinilab/.github/tree/main/profile/README.md
https://patch-diff.githubusercontent.com/cantinilab#welcome-to-cantini-lab
machine learning for integrative genomics G5 grouphttps://research.pasteur.fr/en/team/machine-learning-for-integrative-genomics/
https://patch-diff.githubusercontent.com/cantinilab#resources
https://github.com/cantinilab/Mowgli
https://github.com/cantinilab/scconfluence
https://github.com/cantinilab/HuMMuS
https://github.com/cantinilab/ReCoN
Integrating paired multimodal single-cell datahttps://doi.org/10.1038/s41467-023-43019-2
Integrating unpaired multimodal single-cell datahttps://doi.org/10.1038/s41467-024-51382-x
Molecular mechanisms from multi-omics single-cell datahttps://doi.org/10.1093/bioinformatics/btae143
https://mowgli.readthedocs.io/en/latest/
https://github.com/cantinilab/Mowgli
https://pypi.org/project/mowgli/
https://doi.org/10.1038/s41467-023-43019-2
https://scconfluence.readthedocs.io/en/latest/
https://github.com/cantinilab/scConfluence
https://pypi.org/project/scconfluence/
https://doi.org/10.1038/s41467-024-51382-x
https://cantinilab.github.io/HuMMuS/
https://github.com/cantinilab/HuMMuS
https://pypi.org/project/hummuspy/
https://doi.org/10.1093/bioinformatics/btae143
https://recon-doc.readthedocs.io/en/latest/index.html
https://github.com/cantinilab/ReCoN
https://pypi.org/project/recon/
https://github.com/cantinilab/.github/blob/main/profile/logos/article.svg
https://github.com/cantinilab/stories
https://github.com/cantinilab/scPrint
https://github.com/cantinilab/scPRINT-2
https://github.com/cantinilab/momix-notebook
Learning cell fate landscapes from spatial transcriptomics using Fused Gromov-Wassersteinhttps://doi.org/10.1101/2024.07.26.605241
Transcriptomic foundation model for gene network inference and morehttps://doi.org/10.1101/2024.07.29.605556
Towards the next-generation of cell foundation models and benchmarkshttps://doi.org/10.64898/2025.12.11.693702
Benchmark of multi-omics joint Dimensionality Reduction (jDR) approaches in cancer studyhttps://doi.org/10.1038/s41467-020-20430-7
https://stories.readthedocs.io/en/latest/
https://github.com/cantinilab/stories
https://pypi.org/project/stories-jax/
https://doi.org/10.1101/2024.07.26.605241
https://www.jkobject.com/scPRINT/
https://github.com/cantinilab/scPrint
https://pypi.org/project/scprint/
https://doi.org/10.1101/2024.07.29.605556
https://cantinilab.github.io/scPRINT-2/
https://github.com/cantinilab/scPRINT-2
https://pypi.org/project/scprint2/
https://doi.org/10.64898/2025.12.11.693702
https://github.com/cantinilab/momix-notebook
https://doi.org/10.1038/s41467-020-20430-7
https://patch-diff.githubusercontent.com/cantinilab#other-resources
https://github.com/jkobject/scdataloader
https://github.com/jkobject/bengrn
https://github.com/cantinilab/grnndata
https://github.com/cantinilab/circe
https://github.com/jkobject/scdataloader
https://pypi.org/project/scdataloader/
https://github.com/jkobject/bengrn
https://pypi.org/project/bengrn/
https://github.com/cantinilab/grnndata
https://pypi.org/project/grnndata/
https://github.com/cantinilab/circe
https://pypi.org/project/circe-py/
https://www.biorxiv.org/lookup/doi/10.1101/2025.09.23.678054
Mowglihttps://patch-diff.githubusercontent.com/cantinilab/Mowgli
50 https://patch-diff.githubusercontent.com/cantinilab/Mowgli/stargazers
5 https://patch-diff.githubusercontent.com/cantinilab/Mowgli/forks
HuMMuShttps://patch-diff.githubusercontent.com/cantinilab/HuMMuS
30 https://patch-diff.githubusercontent.com/cantinilab/HuMMuS/stargazers
6 https://patch-diff.githubusercontent.com/cantinilab/HuMMuS/forks
scconfluencehttps://patch-diff.githubusercontent.com/cantinilab/scconfluence
26 https://patch-diff.githubusercontent.com/cantinilab/scconfluence/stargazers
1 https://patch-diff.githubusercontent.com/cantinilab/scconfluence/forks
storieshttps://patch-diff.githubusercontent.com/cantinilab/stories
24 https://patch-diff.githubusercontent.com/cantinilab/stories/stargazers
3 https://patch-diff.githubusercontent.com/cantinilab/stories/forks
scPRINT-2https://patch-diff.githubusercontent.com/cantinilab/scPRINT-2
20 https://patch-diff.githubusercontent.com/cantinilab/scPRINT-2/stargazers
2 https://patch-diff.githubusercontent.com/cantinilab/scPRINT-2/forks
ReCoNhttps://patch-diff.githubusercontent.com/cantinilab/ReCoN
7 https://patch-diff.githubusercontent.com/cantinilab/ReCoN/stargazers
scPRINT-2https://patch-diff.githubusercontent.com/cantinilab/scPRINT-2
Uh oh! There was an error while loading. Please reload this page. https://patch-diff.githubusercontent.com/cantinilab/scPRINT-2/graphs/commit-activity
Please reload this pagehttps://patch-diff.githubusercontent.com/cantinilab
20https://patch-diff.githubusercontent.com/cantinilab/scPRINT-2/stargazers
2https://patch-diff.githubusercontent.com/cantinilab/scPRINT-2/forks
0https://patch-diff.githubusercontent.com/cantinilab/scPRINT-2/issues
0https://patch-diff.githubusercontent.com/cantinilab/scPRINT-2/pulls
recon_reproducibilityhttps://patch-diff.githubusercontent.com/cantinilab/recon_reproducibility
Uh oh! There was an error while loading. Please reload this page. https://patch-diff.githubusercontent.com/cantinilab/recon_reproducibility/graphs/commit-activity
Please reload this pagehttps://patch-diff.githubusercontent.com/cantinilab
0https://patch-diff.githubusercontent.com/cantinilab/recon_reproducibility/issues
0https://patch-diff.githubusercontent.com/cantinilab/recon_reproducibility/pulls
Circehttps://patch-diff.githubusercontent.com/cantinilab/Circe
Uh oh! There was an error while loading. Please reload this page. https://patch-diff.githubusercontent.com/cantinilab/Circe/graphs/commit-activity
Please reload this pagehttps://patch-diff.githubusercontent.com/cantinilab
33https://patch-diff.githubusercontent.com/cantinilab/Circe/stargazers
2https://patch-diff.githubusercontent.com/cantinilab/Circe/forks
1https://patch-diff.githubusercontent.com/cantinilab/Circe/issues
0https://patch-diff.githubusercontent.com/cantinilab/Circe/pulls
ReCoNhttps://patch-diff.githubusercontent.com/cantinilab/ReCoN
Uh oh! There was an error while loading. Please reload this page. https://patch-diff.githubusercontent.com/cantinilab/ReCoN/graphs/commit-activity
Please reload this pagehttps://patch-diff.githubusercontent.com/cantinilab
7https://patch-diff.githubusercontent.com/cantinilab/ReCoN/stargazers
0https://patch-diff.githubusercontent.com/cantinilab/ReCoN/issues
0https://patch-diff.githubusercontent.com/cantinilab/ReCoN/pulls
DynamicNetworkExplorerhttps://patch-diff.githubusercontent.com/cantinilab/DynamicNetworkExplorer
Uh oh! There was an error while loading. Please reload this page. https://patch-diff.githubusercontent.com/cantinilab/DynamicNetworkExplorer/graphs/commit-activity
Please reload this pagehttps://patch-diff.githubusercontent.com/cantinilab
0https://patch-diff.githubusercontent.com/cantinilab/DynamicNetworkExplorer/issues
0https://patch-diff.githubusercontent.com/cantinilab/DynamicNetworkExplorer/pulls
Xpressorhttps://patch-diff.githubusercontent.com/cantinilab/Xpressor
Uh oh! There was an error while loading. Please reload this page. https://patch-diff.githubusercontent.com/cantinilab/Xpressor/graphs/commit-activity
Please reload this pagehttps://patch-diff.githubusercontent.com/cantinilab
4https://patch-diff.githubusercontent.com/cantinilab/Xpressor/stargazers
0https://patch-diff.githubusercontent.com/cantinilab/Xpressor/issues
0https://patch-diff.githubusercontent.com/cantinilab/Xpressor/pulls
.githubhttps://patch-diff.githubusercontent.com/cantinilab/.github
Uh oh! There was an error while loading. Please reload this page. https://patch-diff.githubusercontent.com/cantinilab/.github/graphs/commit-activity
Please reload this pagehttps://patch-diff.githubusercontent.com/cantinilab
2https://patch-diff.githubusercontent.com/cantinilab/.github/forks
0https://patch-diff.githubusercontent.com/cantinilab/.github/issues
2https://patch-diff.githubusercontent.com/cantinilab/.github/pulls
CIRCE_reproducibilityhttps://patch-diff.githubusercontent.com/cantinilab/CIRCE_reproducibility
Uh oh! There was an error while loading. Please reload this page. https://patch-diff.githubusercontent.com/cantinilab/CIRCE_reproducibility/graphs/commit-activity
Please reload this pagehttps://patch-diff.githubusercontent.com/cantinilab
3https://patch-diff.githubusercontent.com/cantinilab/CIRCE_reproducibility/stargazers
0https://patch-diff.githubusercontent.com/cantinilab/CIRCE_reproducibility/issues
0https://patch-diff.githubusercontent.com/cantinilab/CIRCE_reproducibility/pulls
CellOraclehttps://patch-diff.githubusercontent.com/cantinilab/CellOracle
morris-lab/CellOraclehttps://patch-diff.githubusercontent.com/morris-lab/CellOracle
Uh oh! There was an error while loading. Please reload this page. https://patch-diff.githubusercontent.com/cantinilab/CellOracle/graphs/commit-activity
Please reload this pagehttps://patch-diff.githubusercontent.com/cantinilab
1https://patch-diff.githubusercontent.com/cantinilab/CellOracle/stargazers
72https://patch-diff.githubusercontent.com/cantinilab/CellOracle/forks
0https://patch-diff.githubusercontent.com/cantinilab/CellOracle/issues
0https://patch-diff.githubusercontent.com/cantinilab/CellOracle/pulls
HuMMuShttps://patch-diff.githubusercontent.com/cantinilab/HuMMuS
Uh oh! There was an error while loading. Please reload this page. https://patch-diff.githubusercontent.com/cantinilab/HuMMuS/graphs/commit-activity
Please reload this pagehttps://patch-diff.githubusercontent.com/cantinilab
30https://patch-diff.githubusercontent.com/cantinilab/HuMMuS/stargazers
6https://patch-diff.githubusercontent.com/cantinilab/HuMMuS/forks
6https://patch-diff.githubusercontent.com/cantinilab/HuMMuS/issues
1https://patch-diff.githubusercontent.com/cantinilab/HuMMuS/pulls
View all repositorieshttps://patch-diff.githubusercontent.com/orgs/cantinilab/repositories?type=all
People https://patch-diff.githubusercontent.com/orgs/cantinilab/people
https://patch-diff.githubusercontent.com/wariobrega
https://patch-diff.githubusercontent.com/lcan88
https://patch-diff.githubusercontent.com/r-trimbour
Please reload this pagehttps://patch-diff.githubusercontent.com/cantinilab
Please reload this pagehttps://patch-diff.githubusercontent.com/cantinilab
https://github.com
Termshttps://docs.github.com/site-policy/github-terms/github-terms-of-service
Privacyhttps://docs.github.com/site-policy/privacy-policies/github-privacy-statement
Securityhttps://github.com/security
Statushttps://www.githubstatus.com/
Communityhttps://github.community/
Docshttps://docs.github.com/
Contacthttps://support.github.com?tags=dotcom-footer

Viewport: width=device-width


URLs of crawlers that visited me.