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Title: GitHub - canmod/iidda: International Infectious Disease Data Archive

Open Graph Title: GitHub - canmod/iidda: International Infectious Disease Data Archive

X Title: GitHub - canmod/iidda: International Infectious Disease Data Archive

Description: International Infectious Disease Data Archive. Contribute to canmod/iidda development by creating an account on GitHub.

Open Graph Description: International Infectious Disease Data Archive. Contribute to canmod/iidda development by creating an account on GitHub.

X Description: International Infectious Disease Data Archive. Contribute to canmod/iidda development by creating an account on GitHub.

Opengraph URL: https://github.com/canmod/iidda

X: @github

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https://patch-diff.githubusercontent.com/canmod/iidda#international-infectious-disease-data-archive-iidda
http://creativecommons.org/licenses/by-nc-sa/4.0/
https://doi.org/10.5281/zenodo.14187941
https://patch-diff.githubusercontent.com/canmod/iidda/blob/main/assets/1939weeklyON.jpg
International Infectious Disease Data Archive (IIDDA)https://patch-diff.githubusercontent.com/canmod/iidda#international-infectious-disease-data-archive-iidda
Classic IIDDAhttps://patch-diff.githubusercontent.com/canmod/iidda#classic-iidda
Featured Datasetshttps://patch-diff.githubusercontent.com/canmod/iidda#featured-datasets
CANMOD Digitization Projecthttps://patch-diff.githubusercontent.com/canmod/iidda#canmod-digitization-project
IIDDA APIhttps://patch-diff.githubusercontent.com/canmod/iidda#iidda-api
Data Dictionaryhttps://patch-diff.githubusercontent.com/canmod/iidda#data-dictionary
Data Harmonizationhttps://patch-diff.githubusercontent.com/canmod/iidda#data-harmonization
Reproducing IIDDA Datasetshttps://patch-diff.githubusercontent.com/canmod/iidda#reproducing-iidda-datasets
Running Nativelyhttps://patch-diff.githubusercontent.com/canmod/iidda#running-natively
Running in a Docker Containerhttps://patch-diff.githubusercontent.com/canmod/iidda#running-in-a-docker-container
Running Interactivelyhttps://patch-diff.githubusercontent.com/canmod/iidda#running-interactively
Dependency Managementhttps://patch-diff.githubusercontent.com/canmod/iidda#dependency-management
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https://patch-diff.githubusercontent.com/canmod/iidda#classic-iidda
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https://patch-diff.githubusercontent.com/canmod/iidda#featured-datasets
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data harmonizationhttps://patch-diff.githubusercontent.com/canmod/iidda#data-harmonization
https://patch-diff.githubusercontent.com/canmod/iidda#canmod-digitization-project
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systematic curation and digitizationhttps://canmod.net/digitization
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https://www.iso.org/iso-3166-country-codeshttps://www.iso.org/iso-3166-country-codes.html
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https://patch-diff.githubusercontent.com/canmod/iidda#iidda-api
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https://patch-diff.githubusercontent.com/canmod/iidda#data-dictionary
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https://patch-diff.githubusercontent.com/canmod/iidda#data-harmonization
featured datasetshttps://patch-diff.githubusercontent.com/canmod/iidda#featured-datasets
long-formathttps://en.wikipedia.org/wiki/Wide_and_narrow_data
poliomyelitishttps://en.wikipedia.org/wiki/Polio
infantile paralysis is reported historicallyhttps://en.wikipedia.org/wiki/Polio#History
A general primer for data harmonizationhttps://doi.org/10.1038/s41597-024-02956-3
Harmonization-information trade-offs for sharing individual participant data in biomedicinehttps://doi.org/10.1162/99608f92.a9717b34
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https://patch-diff.githubusercontent.com/canmod/iidda#requirements
R > 4.0https://www.r-project.org/
Rscripthttps://rdrr.io/cran/mark/man/rscript.html
iiddahttps://github.com/canmod/iidda-tools/tree/main/R/iidda
iidda.analysishttps://github.com/canmod/iidda-tools/tree/main/R/iidda.analysis
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https://patch-diff.githubusercontent.com/canmod/iidda#project-structure
pipelineshttps://patch-diff.githubusercontent.com/canmod/iidda/blob/main/pipelines
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metadatahttps://patch-diff.githubusercontent.com/canmod/iidda/blob/main/metadata
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identifierhttps://patch-diff.githubusercontent.com/canmod/iidda#identifiers
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access-scriptshttps://patch-diff.githubusercontent.com/canmod/iidda#source-code
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derived datasethttps://patch-diff.githubusercontent.com/canmod/iidda#derived-data-and-tidy-datasets
.d dependency filehttps://patch-diff.githubusercontent.com/canmod/iidda#dependency-management
dataset joinhttps://dplyr.tidyverse.org/reference/mutate-joins.html
human-in-the-loophttps://en.wikipedia.org/wiki/Human-in-the-loop
https://patch-diff.githubusercontent.com/canmod/iidda#contributions
https://patch-diff.githubusercontent.com/canmod/iidda#contributing-source-data-and-pipelines
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these requirementshttps://patch-diff.githubusercontent.com/canmod/iidda#requirements
valid IIDDA columnshttps://patch-diff.githubusercontent.com/canmod/iidda/blob/main/metadata/columns
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pipelineshttps://patch-diff.githubusercontent.com/canmod/iidda/blob/main/pipelines
pull requesthttps://github.blog/developer-skills/github/beginners-guide-to-github-creating-a-pull-request/
Reproducing IIDDA Datasetshttps://patch-diff.githubusercontent.com/canmod/iidda#reproducing-iidda-datasets
https://patch-diff.githubusercontent.com/canmod/iidda#contributing-to-iidda-project-development
maintainerhttps://patch-diff.githubusercontent.com/canmod/iidda#maintainer
these basic requirementshttps://patch-diff.githubusercontent.com/canmod/iidda#requirements
Python >= 3.9https://www.python.org/
iidda-utilitieshttps://github.com/canmod/iidda-utilities
maintainerhttps://patch-diff.githubusercontent.com/canmod/iidda#maintainer
iidda_apihttps://github.com/canmod/iidda-tools/tree/main/python/iidda_api
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make rulehttps://patch-diff.githubusercontent.com/canmod/iidda/blob/main/Makefile
https://patch-diff.githubusercontent.com/canmod/iidda#maintainer
https://github.com/stevencarlislewalkerhttps://github.com/stevencarlislewalker
https://patch-diff.githubusercontent.com/canmod/iidda#funding
CANMODhttps://canmod.net
Readme https://patch-diff.githubusercontent.com/canmod/iidda#readme-ov-file
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Report repository https://patch-diff.githubusercontent.com/contact/report-content?content_url=https%3A%2F%2Fgithub.com%2Fcanmod%2Fiidda&report=canmod+%28user%29
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Tiny update Latest Jan 10, 2026 https://patch-diff.githubusercontent.com/canmod/iidda/releases/tag/v0.0.3
+ 2 releaseshttps://patch-diff.githubusercontent.com/canmod/iidda/releases
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R 91.3% https://patch-diff.githubusercontent.com/canmod/iidda/search?l=r
Makefile 8.2% https://patch-diff.githubusercontent.com/canmod/iidda/search?l=makefile
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