René's URL Explorer Experiment

{"@context":"https://schema.org","@type":"DiscussionForumPosting","headline":"Maybe a bug in function \"read_chunk\"","articleBody":"Here are the details in bed file:\r\n`chr06\t24463\t24507\tGCGGGCGCGACACTGTGGAATGTAGATGGATGATTCTGTGCAAAC\r\nchr06\t24464\t24508\tCGGGCGCGACACTGTGGAATGTAGATGGATGATTCTGTGCAAACT\r\nchr06\t24465\t24509\tGGGCGCGACACTGTGGAATGTAGATGGATGATTCTGTGCAAACTA\r\nchr06\t24466\t24510\tGGCGCGACACTGTGGAATGTAGATGGATGATTCTGTGCAAACTAA\r\nchr06\t24467\t24511\tGCGCGACACTGTGGAATGTAGATGGATGATTCTGTGCAAACTAAA\r\nchr06\t24468\t24512\tCGCGACACTGTGGAATGTAGATGGATGATTCTGTGCAAACTAAAA\r\nchr06\t24469\t24513\tGCGACACTGTGGAATGTAGATGGATGATTCTGTGCAAACTAAAAC\r\nchr06\t24470\t24514\tCGACACTGTGGAATGTAGATGGATGATTCTGTGCAAACTAAAACG`\r\n\r\nHere is the code:\r\n`with bnp.open(bed_path,'r') as a:\r\n    m = a.read_chunk()\r\n    print(m)`\r\n\r\nHere is the result:\r\n`Interval with 75662 entries\r\n               chromosome                    start                     stop\r\n                    chr06                    24463                    24507\r\n                    chr06                    24464                    24508\r\n                    chr06                    24465                    24509\r\n                    chr06                    24466                    24510\r\n                    chr06                    24467                    24511\r\n                    chr06                    24468                    24512\r\n                    chr06                    24469                    24513\r\n                    chr06                    24470                    24514\r\n                    chr06                    24471                    24515\r\n                    chr06                    24472                    24516`\r\n\r\nThe sequence is missing，I think it may be that ‘read_chunk’ does not have global applicability","author":{"url":"https://github.com/Rorschachee","@type":"Person","name":"Rorschachee"},"datePublished":"2024-12-20T05:44:50.000Z","interactionStatistic":{"@type":"InteractionCounter","interactionType":"https://schema.org/CommentAction","userInteractionCount":4},"url":"https://github.com/82/bionumpy/issues/82"}