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Title: Javadoc errors cleanup by josemduarte · Pull Request #1104 · biojava/biojava · GitHub

Open Graph Title: Javadoc errors cleanup by josemduarte · Pull Request #1104 · biojava/biojava

X Title: Javadoc errors cleanup by josemduarte · Pull Request #1104 · biojava/biojava

Description: FYI, I'll merge it. I'll see if I can introduce javadoc linting in CI to avoid any new errors coming in.

Open Graph Description: FYI, I'll merge it. I'll see if I can introduce javadoc linting in CI to avoid any new errors coming in.

X Description: FYI, I'll merge it. I'll see if I can introduce javadoc linting in CI to avoid any new errors coming in.

Opengraph URL: https://github.com/biojava/biojava/pull/1104

X: @github

direct link

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Javadoc fix:

https://patch-diff.githubusercontent.com/biojava/biojava/pull/1104/commits/27a88ff9780f0c67561b046ad44540f779ff4c02
27a88ffhttps://patch-diff.githubusercontent.com/biojava/biojava/pull/1104/commits/27a88ff9780f0c67561b046ad44540f779ff4c02
https://patch-diff.githubusercontent.com/josemduarte
Javadoc fix: param fixeshttps://patch-diff.githubusercontent.com/biojava/biojava/pull/1104/commits/193287b7bff37997d72da9ab188261667f1b1f21
193287bhttps://patch-diff.githubusercontent.com/biojava/biojava/pull/1104/commits/193287b7bff37997d72da9ab188261667f1b1f21
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Javadoc fix: html-like tag not allowedhttps://patch-diff.githubusercontent.com/biojava/biojava/pull/1104/commits/d10480957234d8591f79381f962a985aec1a2c74
d104809https://patch-diff.githubusercontent.com/biojava/biojava/pull/1104/commits/d10480957234d8591f79381f962a985aec1a2c74
https://patch-diff.githubusercontent.com/josemduarte
Javadoc fix: html escapinghttps://patch-diff.githubusercontent.com/biojava/biojava/pull/1104/commits/2fab7b03503a48faff1dde8a86254e1b287dd063
2fab7b0https://patch-diff.githubusercontent.com/biojava/biojava/pull/1104/commits/2fab7b03503a48faff1dde8a86254e1b287dd063
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Javadoc fix: bad tagshttps://patch-diff.githubusercontent.com/biojava/biojava/pull/1104/commits/1c8d58788845e1418b83683734eef997951734c5
1c8d587https://patch-diff.githubusercontent.com/biojava/biojava/pull/1104/commits/1c8d58788845e1418b83683734eef997951734c5
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Javadoc fix: all other errors in core modulehttps://patch-diff.githubusercontent.com/biojava/biojava/pull/1104/commits/13e3afef7566de8d5662eac8438c3dfa9edefa42
13e3afehttps://patch-diff.githubusercontent.com/biojava/biojava/pull/1104/commits/13e3afef7566de8d5662eac8438c3dfa9edefa42
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Javadoc fix: all error in alignment modulehttps://patch-diff.githubusercontent.com/biojava/biojava/pull/1104/commits/71fe179011fbd17a04876da57a4e4f49f0845338
71fe179https://patch-diff.githubusercontent.com/biojava/biojava/pull/1104/commits/71fe179011fbd17a04876da57a4e4f49f0845338
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Javadoc fix: a few errors from structure modulehttps://patch-diff.githubusercontent.com/biojava/biojava/pull/1104/commits/ed7ab8e32d958730568898f733fccd0f0d42273d
ed7ab8ehttps://patch-diff.githubusercontent.com/biojava/biojava/pull/1104/commits/ed7ab8e32d958730568898f733fccd0f0d42273d
https://patch-diff.githubusercontent.com/josemduarte
Javadoc fix: some more errors from structure modulehttps://patch-diff.githubusercontent.com/biojava/biojava/pull/1104/commits/280f2398e7e287c8e3c41d3e09750fb9e0d285d8
280f239https://patch-diff.githubusercontent.com/biojava/biojava/pull/1104/commits/280f2398e7e287c8e3c41d3e09750fb9e0d285d8
https://patch-diff.githubusercontent.com/josemduarte
Javadoc fix: some more errors from structure modulehttps://patch-diff.githubusercontent.com/biojava/biojava/pull/1104/commits/52d10538768889d97e23e5fe245434c956723091
52d1053https://patch-diff.githubusercontent.com/biojava/biojava/pull/1104/commits/52d10538768889d97e23e5fe245434c956723091
https://patch-diff.githubusercontent.com/josemduarte
Javadoc fix: many errors in struct align packagehttps://patch-diff.githubusercontent.com/biojava/biojava/pull/1104/commits/2b33a56bd2fa555c62197ad8f81fff1f46722731
2b33a56https://patch-diff.githubusercontent.com/biojava/biojava/pull/1104/commits/2b33a56bd2fa555c62197ad8f81fff1f46722731
https://patch-diff.githubusercontent.com/josemduarte
Javadoc fix: many errors in struct align packagehttps://patch-diff.githubusercontent.com/biojava/biojava/pull/1104/commits/d2053f30741f1361ab5cf377f8e0da240a7ba59f
d2053f3https://patch-diff.githubusercontent.com/biojava/biojava/pull/1104/commits/d2053f30741f1361ab5cf377f8e0da240a7ba59f
https://patch-diff.githubusercontent.com/josemduarte
Javadoc fix: many errors in struct align packagehttps://patch-diff.githubusercontent.com/biojava/biojava/pull/1104/commits/435ebe98b58bf9cc044dc37414e4ae75a08835b1
435ebe9https://patch-diff.githubusercontent.com/biojava/biojava/pull/1104/commits/435ebe98b58bf9cc044dc37414e4ae75a08835b1
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Javadoc fix: most other errors in structure modulehttps://patch-diff.githubusercontent.com/biojava/biojava/pull/1104/commits/0c7e9f5fc52f79e942cf1780baafde473b459368
0c7e9f5https://patch-diff.githubusercontent.com/biojava/biojava/pull/1104/commits/0c7e9f5fc52f79e942cf1780baafde473b459368
https://patch-diff.githubusercontent.com/josemduarte
Javadoc fix: remaining errors in structure module. Mostly obsolete re…https://patch-diff.githubusercontent.com/biojava/biojava/pull/1104/commits/2bbc82438cc8aba6dbbfbc362aef4959a0714918
2bbc824https://patch-diff.githubusercontent.com/biojava/biojava/pull/1104/commits/2bbc82438cc8aba6dbbfbc362aef4959a0714918
https://patch-diff.githubusercontent.com/josemduarte
Javadoc fix: errors in structure-gui modulehttps://patch-diff.githubusercontent.com/biojava/biojava/pull/1104/commits/aefa34a52f1c208e3b43d005d5db336052cef900
aefa34ahttps://patch-diff.githubusercontent.com/biojava/biojava/pull/1104/commits/aefa34a52f1c208e3b43d005d5db336052cef900
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Javadoc fix: errors in genome modulehttps://patch-diff.githubusercontent.com/biojava/biojava/pull/1104/commits/3580f7bac804f3305411a7a9d41bdb47cb836b4e
3580f7bhttps://patch-diff.githubusercontent.com/biojava/biojava/pull/1104/commits/3580f7bac804f3305411a7a9d41bdb47cb836b4e
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Javadoc fix: errors in modfinder modulehttps://patch-diff.githubusercontent.com/biojava/biojava/pull/1104/commits/bb073294543ce4c4096d0389ab89aad9d33675f2
bb07329https://patch-diff.githubusercontent.com/biojava/biojava/pull/1104/commits/bb073294543ce4c4096d0389ab89aad9d33675f2
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Javadoc fix: errors in ws modulehttps://patch-diff.githubusercontent.com/biojava/biojava/pull/1104/commits/d483bba04798f62fec44f6a83262a1c74370202e
d483bbahttps://patch-diff.githubusercontent.com/biojava/biojava/pull/1104/commits/d483bba04798f62fec44f6a83262a1c74370202e
https://patch-diff.githubusercontent.com/josemduarte
Javadoc fix: errors in protein-disorder modulehttps://patch-diff.githubusercontent.com/biojava/biojava/pull/1104/commits/0183dc629b76a2632dfdf271462a3a90fbef085b
0183dc6https://patch-diff.githubusercontent.com/biojava/biojava/pull/1104/commits/0183dc629b76a2632dfdf271462a3a90fbef085b
https://patch-diff.githubusercontent.com/josemduarte
Javadoc fix: errors in aaprops and survival and moduleshttps://patch-diff.githubusercontent.com/biojava/biojava/pull/1104/commits/24310c315b565389cae7c4d38f00908c2bedaee7
24310c3https://patch-diff.githubusercontent.com/biojava/biojava/pull/1104/commits/24310c315b565389cae7c4d38f00908c2bedaee7
https://patch-diff.githubusercontent.com/josemduarte
Javadoc fix: errors in ontology modulehttps://patch-diff.githubusercontent.com/biojava/biojava/pull/1104/commits/b55dc80cfba061dcc9e4ca09bdc4f6c5c9137037
b55dc80https://patch-diff.githubusercontent.com/biojava/biojava/pull/1104/commits/b55dc80cfba061dcc9e4ca09bdc4f6c5c9137037
https://patch-diff.githubusercontent.com/josemduarte
Javadoc fix: errors in integration-test modulehttps://patch-diff.githubusercontent.com/biojava/biojava/pull/1104/commits/c3079eaed9fb58e89a8a286f62e919cfbf6dc7de
c3079eahttps://patch-diff.githubusercontent.com/biojava/biojava/pull/1104/commits/c3079eaed9fb58e89a8a286f62e919cfbf6dc7de
https://patch-diff.githubusercontent.com/josemduarte
Merge branch 'master' into javadocfixeshttps://patch-diff.githubusercontent.com/biojava/biojava/pull/1104/commits/48c29b1c3b8ef3020f147beb1d45240d269b33c1
48c29b1https://patch-diff.githubusercontent.com/biojava/biojava/pull/1104/commits/48c29b1c3b8ef3020f147beb1d45240d269b33c1
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e008450https://patch-diff.githubusercontent.com/biojava/biojava/commit/e0084505e640e611622d502d9970711c01b98a8e
Jan 7, 2025https://github.com/biojava/biojava/pull/1104#event-15845450113
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