René's URL Explorer Experiment


Title: GitHub - bigbio/quantms: Quantitative mass spectrometry workflow. Currently supports proteomics experiments with complex experimental designs for DDA-LFQ, DDA-Isobaric and DIA-LFQ quantification.

Open Graph Title: GitHub - bigbio/quantms: Quantitative mass spectrometry workflow. Currently supports proteomics experiments with complex experimental designs for DDA-LFQ, DDA-Isobaric and DIA-LFQ quantification.

X Title: GitHub - bigbio/quantms: Quantitative mass spectrometry workflow. Currently supports proteomics experiments with complex experimental designs for DDA-LFQ, DDA-Isobaric and DIA-LFQ quantification.

Description: Quantitative mass spectrometry workflow. Currently supports proteomics experiments with complex experimental designs for DDA-LFQ, DDA-Isobaric and DIA-LFQ quantification. - bigbio/quantms

Open Graph Description: Quantitative mass spectrometry workflow. Currently supports proteomics experiments with complex experimental designs for DDA-LFQ, DDA-Isobaric and DIA-LFQ quantification. - bigbio/quantms

X Description: Quantitative mass spectrometry workflow. Currently supports proteomics experiments with complex experimental designs for DDA-LFQ, DDA-Isobaric and DIA-LFQ quantification. - bigbio/quantms

Opengraph URL: https://github.com/bigbio/quantms

X: @github

direct link

Domain: patch-diff.githubusercontent.com

route-pattern/:user_id/:repository
route-controllerfiles
route-actiondisambiguate
fetch-noncev2:beda65d4-0d71-06be-c8ca-09a8f0fbdaf8
current-catalog-service-hashf3abb0cc802f3d7b95fc8762b94bdcb13bf39634c40c357301c4aa1d67a256fb
request-idB384:563B0:5B1E7E0:7C7EAE6:698CECBA
html-safe-nonce33335c8b1c20e368a768cd7466188100b37c20dd3d05bf8bc393d4d32277336f
visitor-payloadeyJyZWZlcnJlciI6IiIsInJlcXVlc3RfaWQiOiJCMzg0OjU2M0IwOjVCMUU3RTA6N0M3RUFFNjo2OThDRUNCQSIsInZpc2l0b3JfaWQiOiI4NjA3ODg3MjY1MDEwMzQ3MTk0IiwicmVnaW9uX2VkZ2UiOiJpYWQiLCJyZWdpb25fcmVuZGVyIjoiaWFkIn0=
visitor-hmac5fd862a3423b486b28a1cb7b639fc3817fe31e28b915e600734802d67df54433
hovercard-subject-tagrepository:421926463
github-keyboard-shortcutsrepository,copilot
google-site-verificationApib7-x98H0j5cPqHWwSMm6dNU4GmODRoqxLiDzdx9I
octolytics-urlhttps://collector.github.com/github/collect
analytics-location//
fb:app_id1401488693436528
apple-itunes-appapp-id=1477376905, app-argument=https://github.com/bigbio/quantms
twitter:imagehttps://repository-images.githubusercontent.com/421926463/2a36a787-d66d-4418-844e-aab3879358b9
twitter:cardsummary_large_image
og:imagehttps://repository-images.githubusercontent.com/421926463/2a36a787-d66d-4418-844e-aab3879358b9
og:image:altQuantitative mass spectrometry workflow. Currently supports proteomics experiments with complex experimental designs for DDA-LFQ, DDA-Isobaric and DIA-LFQ quantification. - bigbio/quantms
og:site_nameGitHub
og:typeobject
hostnamegithub.com
expected-hostnamegithub.com
None640eeb7b6ff4d8d106235d228c0c286e82592d4d2403227b5b2b4fc5832297a4
turbo-cache-controlno-preview
go-importgithub.com/bigbio/quantms git https://github.com/bigbio/quantms.git
octolytics-dimension-user_id10880371
octolytics-dimension-user_loginbigbio
octolytics-dimension-repository_id421926463
octolytics-dimension-repository_nwobigbio/quantms
octolytics-dimension-repository_publictrue
octolytics-dimension-repository_is_forkfalse
octolytics-dimension-repository_network_root_id421926463
octolytics-dimension-repository_network_root_nwobigbio/quantms
turbo-body-classeslogged-out env-production page-responsive
disable-turbofalse
browser-stats-urlhttps://api.github.com/_private/browser/stats
browser-errors-urlhttps://api.github.com/_private/browser/errors
release3d444f0a47beeeac94cddbb51c91ab408befe8d4
ui-targetfull
theme-color#1e2327
color-schemelight dark

Links:

Skip to contenthttps://patch-diff.githubusercontent.com/bigbio/quantms#start-of-content
https://patch-diff.githubusercontent.com/
Sign in https://patch-diff.githubusercontent.com/login?return_to=https%3A%2F%2Fgithub.com%2Fbigbio%2Fquantms
GitHub CopilotWrite better code with AIhttps://github.com/features/copilot
GitHub SparkBuild and deploy intelligent appshttps://github.com/features/spark
GitHub ModelsManage and compare promptshttps://github.com/features/models
MCP RegistryNewIntegrate external toolshttps://github.com/mcp
ActionsAutomate any workflowhttps://github.com/features/actions
CodespacesInstant dev environmentshttps://github.com/features/codespaces
IssuesPlan and track workhttps://github.com/features/issues
Code ReviewManage code changeshttps://github.com/features/code-review
GitHub Advanced SecurityFind and fix vulnerabilitieshttps://github.com/security/advanced-security
Code securitySecure your code as you buildhttps://github.com/security/advanced-security/code-security
Secret protectionStop leaks before they starthttps://github.com/security/advanced-security/secret-protection
Why GitHubhttps://github.com/why-github
Documentationhttps://docs.github.com
Bloghttps://github.blog
Changeloghttps://github.blog/changelog
Marketplacehttps://github.com/marketplace
View all featureshttps://github.com/features
Enterpriseshttps://github.com/enterprise
Small and medium teamshttps://github.com/team
Startupshttps://github.com/enterprise/startups
Nonprofitshttps://github.com/solutions/industry/nonprofits
App Modernizationhttps://github.com/solutions/use-case/app-modernization
DevSecOpshttps://github.com/solutions/use-case/devsecops
DevOpshttps://github.com/solutions/use-case/devops
CI/CDhttps://github.com/solutions/use-case/ci-cd
View all use caseshttps://github.com/solutions/use-case
Healthcarehttps://github.com/solutions/industry/healthcare
Financial serviceshttps://github.com/solutions/industry/financial-services
Manufacturinghttps://github.com/solutions/industry/manufacturing
Governmenthttps://github.com/solutions/industry/government
View all industrieshttps://github.com/solutions/industry
View all solutionshttps://github.com/solutions
AIhttps://github.com/resources/articles?topic=ai
Software Developmenthttps://github.com/resources/articles?topic=software-development
DevOpshttps://github.com/resources/articles?topic=devops
Securityhttps://github.com/resources/articles?topic=security
View all topicshttps://github.com/resources/articles
Customer storieshttps://github.com/customer-stories
Events & webinarshttps://github.com/resources/events
Ebooks & reportshttps://github.com/resources/whitepapers
Business insightshttps://github.com/solutions/executive-insights
GitHub Skillshttps://skills.github.com
Documentationhttps://docs.github.com
Customer supporthttps://support.github.com
Community forumhttps://github.com/orgs/community/discussions
Trust centerhttps://github.com/trust-center
Partnershttps://github.com/partners
GitHub SponsorsFund open source developershttps://github.com/sponsors
Security Labhttps://securitylab.github.com
Maintainer Communityhttps://maintainers.github.com
Acceleratorhttps://github.com/accelerator
Archive Programhttps://archiveprogram.github.com
Topicshttps://github.com/topics
Trendinghttps://github.com/trending
Collectionshttps://github.com/collections
Enterprise platformAI-powered developer platformhttps://github.com/enterprise
GitHub Advanced SecurityEnterprise-grade security featureshttps://github.com/security/advanced-security
Copilot for BusinessEnterprise-grade AI featureshttps://github.com/features/copilot/copilot-business
Premium SupportEnterprise-grade 24/7 supporthttps://github.com/premium-support
Pricinghttps://github.com/pricing
Search syntax tipshttps://docs.github.com/search-github/github-code-search/understanding-github-code-search-syntax
documentationhttps://docs.github.com/search-github/github-code-search/understanding-github-code-search-syntax
Sign in https://patch-diff.githubusercontent.com/login?return_to=https%3A%2F%2Fgithub.com%2Fbigbio%2Fquantms
Sign up https://patch-diff.githubusercontent.com/signup?ref_cta=Sign+up&ref_loc=header+logged+out&ref_page=%2F%3Cuser-name%3E%2F%3Crepo-name%3E&source=header-repo&source_repo=bigbio%2Fquantms
Reloadhttps://patch-diff.githubusercontent.com/bigbio/quantms
Reloadhttps://patch-diff.githubusercontent.com/bigbio/quantms
Reloadhttps://patch-diff.githubusercontent.com/bigbio/quantms
bigbio https://patch-diff.githubusercontent.com/bigbio
quantmshttps://patch-diff.githubusercontent.com/bigbio/quantms
Notifications https://patch-diff.githubusercontent.com/login?return_to=%2Fbigbio%2Fquantms
Fork 52 https://patch-diff.githubusercontent.com/login?return_to=%2Fbigbio%2Fquantms
Star 68 https://patch-diff.githubusercontent.com/login?return_to=%2Fbigbio%2Fquantms
quantms.orghttps://quantms.org
MIT license https://patch-diff.githubusercontent.com/bigbio/quantms/blob/master/LICENSE
68 stars https://patch-diff.githubusercontent.com/bigbio/quantms/stargazers
52 forks https://patch-diff.githubusercontent.com/bigbio/quantms/forks
Branches https://patch-diff.githubusercontent.com/bigbio/quantms/branches
Tags https://patch-diff.githubusercontent.com/bigbio/quantms/tags
Activity https://patch-diff.githubusercontent.com/bigbio/quantms/activity
Star https://patch-diff.githubusercontent.com/login?return_to=%2Fbigbio%2Fquantms
Notifications https://patch-diff.githubusercontent.com/login?return_to=%2Fbigbio%2Fquantms
Code https://patch-diff.githubusercontent.com/bigbio/quantms
Issues 67 https://patch-diff.githubusercontent.com/bigbio/quantms/issues
Pull requests 1 https://patch-diff.githubusercontent.com/bigbio/quantms/pulls
Discussions https://patch-diff.githubusercontent.com/bigbio/quantms/discussions
Actions https://patch-diff.githubusercontent.com/bigbio/quantms/actions
Projects 0 https://patch-diff.githubusercontent.com/bigbio/quantms/projects
Security 0 https://patch-diff.githubusercontent.com/bigbio/quantms/security
Insights https://patch-diff.githubusercontent.com/bigbio/quantms/pulse
Code https://patch-diff.githubusercontent.com/bigbio/quantms
Issues https://patch-diff.githubusercontent.com/bigbio/quantms/issues
Pull requests https://patch-diff.githubusercontent.com/bigbio/quantms/pulls
Discussions https://patch-diff.githubusercontent.com/bigbio/quantms/discussions
Actions https://patch-diff.githubusercontent.com/bigbio/quantms/actions
Projects https://patch-diff.githubusercontent.com/bigbio/quantms/projects
Security https://patch-diff.githubusercontent.com/bigbio/quantms/security
Insights https://patch-diff.githubusercontent.com/bigbio/quantms/pulse
Brancheshttps://patch-diff.githubusercontent.com/bigbio/quantms/branches
Tagshttps://patch-diff.githubusercontent.com/bigbio/quantms/tags
https://patch-diff.githubusercontent.com/bigbio/quantms/branches
https://patch-diff.githubusercontent.com/bigbio/quantms/tags
2,614 Commitshttps://patch-diff.githubusercontent.com/bigbio/quantms/commits/master/
https://patch-diff.githubusercontent.com/bigbio/quantms/commits/master/
.devcontainerhttps://patch-diff.githubusercontent.com/bigbio/quantms/tree/master/.devcontainer
.devcontainerhttps://patch-diff.githubusercontent.com/bigbio/quantms/tree/master/.devcontainer
.githubhttps://patch-diff.githubusercontent.com/bigbio/quantms/tree/master/.github
.githubhttps://patch-diff.githubusercontent.com/bigbio/quantms/tree/master/.github
assetshttps://patch-diff.githubusercontent.com/bigbio/quantms/tree/master/assets
assetshttps://patch-diff.githubusercontent.com/bigbio/quantms/tree/master/assets
binhttps://patch-diff.githubusercontent.com/bigbio/quantms/tree/master/bin
binhttps://patch-diff.githubusercontent.com/bigbio/quantms/tree/master/bin
confhttps://patch-diff.githubusercontent.com/bigbio/quantms/tree/master/conf
confhttps://patch-diff.githubusercontent.com/bigbio/quantms/tree/master/conf
docshttps://patch-diff.githubusercontent.com/bigbio/quantms/tree/master/docs
docshttps://patch-diff.githubusercontent.com/bigbio/quantms/tree/master/docs
moduleshttps://patch-diff.githubusercontent.com/bigbio/quantms/tree/master/modules
moduleshttps://patch-diff.githubusercontent.com/bigbio/quantms/tree/master/modules
subworkflowshttps://patch-diff.githubusercontent.com/bigbio/quantms/tree/master/subworkflows
subworkflowshttps://patch-diff.githubusercontent.com/bigbio/quantms/tree/master/subworkflows
testshttps://patch-diff.githubusercontent.com/bigbio/quantms/tree/master/tests
testshttps://patch-diff.githubusercontent.com/bigbio/quantms/tree/master/tests
workflowshttps://patch-diff.githubusercontent.com/bigbio/quantms/tree/master/workflows
workflowshttps://patch-diff.githubusercontent.com/bigbio/quantms/tree/master/workflows
.gitattributeshttps://patch-diff.githubusercontent.com/bigbio/quantms/blob/master/.gitattributes
.gitattributeshttps://patch-diff.githubusercontent.com/bigbio/quantms/blob/master/.gitattributes
.gitignorehttps://patch-diff.githubusercontent.com/bigbio/quantms/blob/master/.gitignore
.gitignorehttps://patch-diff.githubusercontent.com/bigbio/quantms/blob/master/.gitignore
.nf-core.ymlhttps://patch-diff.githubusercontent.com/bigbio/quantms/blob/master/.nf-core.yml
.nf-core.ymlhttps://patch-diff.githubusercontent.com/bigbio/quantms/blob/master/.nf-core.yml
.pre-commit-config.yamlhttps://patch-diff.githubusercontent.com/bigbio/quantms/blob/master/.pre-commit-config.yaml
.pre-commit-config.yamlhttps://patch-diff.githubusercontent.com/bigbio/quantms/blob/master/.pre-commit-config.yaml
.prettierignorehttps://patch-diff.githubusercontent.com/bigbio/quantms/blob/master/.prettierignore
.prettierignorehttps://patch-diff.githubusercontent.com/bigbio/quantms/blob/master/.prettierignore
.prettierrc.ymlhttps://patch-diff.githubusercontent.com/bigbio/quantms/blob/master/.prettierrc.yml
.prettierrc.ymlhttps://patch-diff.githubusercontent.com/bigbio/quantms/blob/master/.prettierrc.yml
CHANGELOG.mdhttps://patch-diff.githubusercontent.com/bigbio/quantms/blob/master/CHANGELOG.md
CHANGELOG.mdhttps://patch-diff.githubusercontent.com/bigbio/quantms/blob/master/CHANGELOG.md
CITATIONS.mdhttps://patch-diff.githubusercontent.com/bigbio/quantms/blob/master/CITATIONS.md
CITATIONS.mdhttps://patch-diff.githubusercontent.com/bigbio/quantms/blob/master/CITATIONS.md
CODE_OF_CONDUCT.mdhttps://patch-diff.githubusercontent.com/bigbio/quantms/blob/master/CODE_OF_CONDUCT.md
CODE_OF_CONDUCT.mdhttps://patch-diff.githubusercontent.com/bigbio/quantms/blob/master/CODE_OF_CONDUCT.md
LICENSEhttps://patch-diff.githubusercontent.com/bigbio/quantms/blob/master/LICENSE
LICENSEhttps://patch-diff.githubusercontent.com/bigbio/quantms/blob/master/LICENSE
README.mdhttps://patch-diff.githubusercontent.com/bigbio/quantms/blob/master/README.md
README.mdhttps://patch-diff.githubusercontent.com/bigbio/quantms/blob/master/README.md
main.nfhttps://patch-diff.githubusercontent.com/bigbio/quantms/blob/master/main.nf
main.nfhttps://patch-diff.githubusercontent.com/bigbio/quantms/blob/master/main.nf
modules.jsonhttps://patch-diff.githubusercontent.com/bigbio/quantms/blob/master/modules.json
modules.jsonhttps://patch-diff.githubusercontent.com/bigbio/quantms/blob/master/modules.json
nextflow.confighttps://patch-diff.githubusercontent.com/bigbio/quantms/blob/master/nextflow.config
nextflow.confighttps://patch-diff.githubusercontent.com/bigbio/quantms/blob/master/nextflow.config
nextflow_schema.jsonhttps://patch-diff.githubusercontent.com/bigbio/quantms/blob/master/nextflow_schema.json
nextflow_schema.jsonhttps://patch-diff.githubusercontent.com/bigbio/quantms/blob/master/nextflow_schema.json
nf-test.confighttps://patch-diff.githubusercontent.com/bigbio/quantms/blob/master/nf-test.config
nf-test.confighttps://patch-diff.githubusercontent.com/bigbio/quantms/blob/master/nf-test.config
ro-crate-metadata.jsonhttps://patch-diff.githubusercontent.com/bigbio/quantms/blob/master/ro-crate-metadata.json
ro-crate-metadata.jsonhttps://patch-diff.githubusercontent.com/bigbio/quantms/blob/master/ro-crate-metadata.json
tower.ymlhttps://patch-diff.githubusercontent.com/bigbio/quantms/blob/master/tower.yml
tower.ymlhttps://patch-diff.githubusercontent.com/bigbio/quantms/blob/master/tower.yml
READMEhttps://patch-diff.githubusercontent.com/bigbio/quantms
Code of conducthttps://patch-diff.githubusercontent.com/bigbio/quantms
Contributinghttps://patch-diff.githubusercontent.com/bigbio/quantms
MIT licensehttps://patch-diff.githubusercontent.com/bigbio/quantms
https://patch-diff.githubusercontent.com/bigbio/quantms/blob/master/docs/images/nf-core-quantms_logo_light.png#gh-light-mode-only
https://patch-diff.githubusercontent.com/bigbio/quantms/blob/master/docs/images/nf-core-quantms_logo_dark.png#gh-dark-mode-only
https://patch-diff.githubusercontent.com/bigbio/quantms#-
https://github.com/bigbio/quantms/actions/workflows/ci.yml
https://github.com/bigbio/quantms/actions/workflows/linting.yml
https://nf-co.re/quantms/results
https://doi.org/10.5281/zenodo.15573386
https://www.nf-test.com
https://www.nextflow.io/
https://github.com/nf-core/tools/releases/tag/3.4.1
https://www.docker.com/
https://sylabs.io/docs/
https://cloud.seqera.io/launch?pipeline=https://github.com/nf-core/quantms
https://nfcore.slack.com/channels/quantms
https://twitter.com/nf_core
https://mstdn.science/@nf_core
https://www.youtube.com/c/nf-core
https://patch-diff.githubusercontent.com/bigbio/quantms#introduction
quantmshttps://quantms.readthedocs.io/en/latest/
https://patch-diff.githubusercontent.com/bigbio/quantms/blob/master/docs/images/quantms.png
Nextflowhttps://www.nextflow.io
Nextflow DSL2https://www.nextflow.io/docs/latest/dsl2.html
nf-core/moduleshttps://github.com/nf-core/modules
nf-core websitehttps://nf-co.re/quantms/results
https://patch-diff.githubusercontent.com/bigbio/quantms#pipeline-summary
https://patch-diff.githubusercontent.com/bigbio/quantms#dda-lfq-data-dependent-label-free-quantification
thermorawfileparserhttps://github.com/compomics/ThermoRawFileParser
comethttps://uwpr.github.io/Comet/
msgf+https://github.com/MSGFPlus/msgfplus
quantms-rescoringhttps://github.com/bigbio/quantms-rescoring
percolatorhttps://github.com/percolator/percolator
openms fdr toolhttps://github.com/bigbio/quantms/blob/HEAD/modules/local/openms/false_discovery_rate/main.nf
onsitehttps://github.com/bigbio/onsite
proteomicsLFQhttps://abibuilder.cs.uni-tuebingen.de/archive/openms/Documentation/nightly/html/TOPP_ProteomicsLFQ.html
proteomicsLFQhttps://abibuilder.cs.uni-tuebingen.de/archive/openms/Documentation/nightly/html/TOPP_ProteomicsLFQ.html
pmultiqchttps://github.com/bigbio/pmultiqc
MSstatshttps://github.com/VitekLab/MSstats
https://patch-diff.githubusercontent.com/bigbio/quantms#dda-iso-data-dependent-quantification-via-isobaric-labelling
thermorawfileparserhttps://github.com/compomics/ThermoRawFileParser
comethttps://uwpr.github.io/Comet/
msgf+https://github.com/MSGFPlus/msgfplus
quantms-rescoringhttps://github.com/bigbio/quantms-rescoring
percolatorhttps://github.com/percolator/percolator
openms fdr toolhttps://github.com/bigbio/quantms/blob/HEAD/modules/local/openms/false_discovery_rate/main.nf
onsitehttps://github.com/bigbio/onsite
IsobaricAnalyzerhttps://abibuilder.cs.uni-tuebingen.de/archive/openms/Documentation/nightly/html/TOPP_IsobaricAnalyzer.html
ProteinInferencehttps://abibuilder.cs.uni-tuebingen.de/archive/openms/Documentation/nightly/html/TOPP_ProteinInference.html
Epifanyhttps://abibuilder.cs.uni-tuebingen.de/archive/openms/Documentation/nightly/html/TOPP_Epifany.html
ProteinQuantifierhttps://abibuilder.cs.uni-tuebingen.de/archive/openms/Documentation/nightly/html/TOPP_ProteinQuantifier.html
pmultiqchttps://github.com/bigbio/pmultiqc
MSstatshttps://github.com/VitekLab/MSstats
https://patch-diff.githubusercontent.com/bigbio/quantms#dia-lfq-data-independent-label-free-quantification
thermorawfileparserhttps://github.com/compomics/ThermoRawFileParser
optional stephttps://github.com/bigbio/quantms/blob/HEAD/modules/local/utils/tdf2mzml/main.nf
dia-nnhttps://github.com/vdemichev/DiaNN/
pmultiqchttps://github.com/bigbio/pmultiqc
https://patch-diff.githubusercontent.com/bigbio/quantms#functionality-overview
https://patch-diff.githubusercontent.com/bigbio/quantms/blob/master/docs/images/quantms_metro.png
https://patch-diff.githubusercontent.com/bigbio/quantms#usage
this pagehttps://nf-co.re/docs/usage/installation
test your setuphttps://nf-co.re/docs/usage/introduction#how-to-run-a-pipeline
https://patch-diff.githubusercontent.com/bigbio/quantms#supported-file-formats
SDRFhttps://github.com/bigbio/proteomics-sample-metadata
herehttps://github.com/bigbio/proteomics-sample-metadata/tree/master/annotated-projects
Uniprothttps://www.uniprot.org/proteomes?query=*
docshttps://nf-co.re/usage/configuration#custom-configuration-files
usage documentationhttps://nf-co.re/quantms/usage
parameter documentationhttps://nf-co.re/quantms/parameters
https://patch-diff.githubusercontent.com/bigbio/quantms#additional-documentation-and-tutorial
full documentationhttps://quantms.readthedocs.io/en/latest/
https://patch-diff.githubusercontent.com/bigbio/quantms#pipeline-output
resultshttps://nf-co.re/quantms/results
output documentationhttps://nf-co.re/quantms/output
https://patch-diff.githubusercontent.com/bigbio/quantms#credits
@daichengxinhttps://github.com/daichengxin
@jpfeufferhttps://github.com/jpfeuffer
@ypriverolhttps://github.com/ypriverol
@timosachsenberghttps://github.com/timosachsenberg
@WangHong007https://github.com/WangHong007
@enryHhttps://github.com/enryH
@fabianeglihttps://github.com/fabianegli
https://patch-diff.githubusercontent.com/bigbio/quantms#contributions-and-support
contributing guidelineshttps://patch-diff.githubusercontent.com/bigbio/quantms/blob/master/.github/CONTRIBUTING.md
Slack #quantms channelhttps://nfcore.slack.com/channels/quantms
this invitehttps://nf-co.re/join/slack
https://patch-diff.githubusercontent.com/bigbio/quantms#how-to-cite
10.1038/s41592-024-02343-1https://doi.org/10.1038/s41592-024-02343-1
https://patch-diff.githubusercontent.com/bigbio/quantms#how-to-cite-nf-core
CITATIONS.mdhttps://patch-diff.githubusercontent.com/bigbio/quantms/blob/master/CITATIONS.md
10.1038/s41587-020-0439-xhttps://dx.doi.org/10.1038/s41587-020-0439-x
quantms.orghttps://quantms.org
proteomics https://patch-diff.githubusercontent.com/topics/proteomics
mass-spectrometry https://patch-diff.githubusercontent.com/topics/mass-spectrometry
proteogenomics https://patch-diff.githubusercontent.com/topics/proteogenomics
tmt https://patch-diff.githubusercontent.com/topics/tmt
lfq https://patch-diff.githubusercontent.com/topics/lfq
Readme https://patch-diff.githubusercontent.com/bigbio/quantms#readme-ov-file
MIT license https://patch-diff.githubusercontent.com/bigbio/quantms#MIT-1-ov-file
Code of conduct https://patch-diff.githubusercontent.com/bigbio/quantms#coc-ov-file
Contributing https://patch-diff.githubusercontent.com/bigbio/quantms#contributing-ov-file
Please reload this pagehttps://patch-diff.githubusercontent.com/bigbio/quantms
Activityhttps://patch-diff.githubusercontent.com/bigbio/quantms/activity
Custom propertieshttps://patch-diff.githubusercontent.com/bigbio/quantms/custom-properties
68 starshttps://patch-diff.githubusercontent.com/bigbio/quantms/stargazers
6 watchinghttps://patch-diff.githubusercontent.com/bigbio/quantms/watchers
52 forkshttps://patch-diff.githubusercontent.com/bigbio/quantms/forks
Report repository https://patch-diff.githubusercontent.com/contact/report-content?content_url=https%3A%2F%2Fgithub.com%2Fbigbio%2Fquantms&report=bigbio+%28user%29
Releases 5https://patch-diff.githubusercontent.com/bigbio/quantms/releases
1.7.0 - Caracas Latest Jan 9, 2026 https://patch-diff.githubusercontent.com/bigbio/quantms/releases/tag/1.7.0
+ 4 releaseshttps://patch-diff.githubusercontent.com/bigbio/quantms/releases
Packages 0https://patch-diff.githubusercontent.com/orgs/bigbio/packages?repo_name=quantms
Please reload this pagehttps://patch-diff.githubusercontent.com/bigbio/quantms
Contributors 23https://patch-diff.githubusercontent.com/bigbio/quantms/graphs/contributors
Please reload this pagehttps://patch-diff.githubusercontent.com/bigbio/quantms
+ 9 contributorshttps://patch-diff.githubusercontent.com/bigbio/quantms/graphs/contributors
Nextflow 83.4% https://patch-diff.githubusercontent.com/bigbio/quantms/search?l=nextflow
R 15.7% https://patch-diff.githubusercontent.com/bigbio/quantms/search?l=r
https://github.com
Termshttps://docs.github.com/site-policy/github-terms/github-terms-of-service
Privacyhttps://docs.github.com/site-policy/privacy-policies/github-privacy-statement
Securityhttps://github.com/security
Statushttps://www.githubstatus.com/
Communityhttps://github.community/
Docshttps://docs.github.com/
Contacthttps://support.github.com?tags=dotcom-footer

Viewport: width=device-width


URLs of crawlers that visited me.