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Title: GitHub - aedera/anc2vec: Unsupervised neural network for learning embeddings of GO terms.

Open Graph Title: GitHub - aedera/anc2vec: Unsupervised neural network for learning embeddings of GO terms.

X Title: GitHub - aedera/anc2vec: Unsupervised neural network for learning embeddings of GO terms.

Description: Unsupervised neural network for learning embeddings of GO terms. - aedera/anc2vec

Open Graph Description: Unsupervised neural network for learning embeddings of GO terms. - aedera/anc2vec

X Description: Unsupervised neural network for learning embeddings of GO terms. - aedera/anc2vec

Opengraph URL: https://github.com/aedera/anc2vec

X: @github

direct link

Domain: patch-diff.githubusercontent.com

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https://patch-diff.githubusercontent.com/aedera/anc2vec#anc2vec
Gene Ontologyhttp://geneontology.org/
Anc2vec: embedding Gene Ontology terms by preserving ancestors relationshipshttps://patch-diff.githubusercontent.com/aedera/anc2vec/blob/main/ms.pdf
sinc(i)https://sinc.unl.edu.ar
https://patch-diff.githubusercontent.com/aedera/anc2vec/blob/main/img/Fig01.jpg
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Pythonhttps://www.python.org/
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https://patch-diff.githubusercontent.com/aedera/anc2vec#installation
Condahttps://docs.conda.io/en/latest/
pip package managerhttps://pip.pypa.io/en/stable/installing/
https://patch-diff.githubusercontent.com/aedera/anc2vec#anc2vec-functionalities
https://patch-diff.githubusercontent.com/aedera/anc2vec#access-pre-trained-embeddings
2020-10-06https://patch-diff.githubusercontent.com/aedera/anc2vec/blob/main/anc2vec/data/go.obo
Numpyhttps://numpy.org/
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https://patch-diff.githubusercontent.com/aedera/anc2vec#build-your-own-embeddings
OBO filehttp://owlcollab.github.io/oboformat/doc/obo-syntax.html
GO data archivehttp://release.geneontology.org/
https://patch-diff.githubusercontent.com/aedera/anc2vec#notebooks-examples-on-how-to-use-the-anc2vec-package
Jupyter notebookshttps://jupyter.org
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Using anc2vec pre-trained embeddingshttps://colab.research.google.com/github/aedera/anc2vec/blob/main/examples/pretrained_anc2vec_embeddings.ipynb
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https://patch-diff.githubusercontent.com/aedera/anc2vec#datasets
Ancestors datasethttps://drive.google.com/file/d/1fgK50TNg5nrade22SwmqZYOeAxgPHIHY/view?usp=sharing
Protein function datasethttps://drive.google.com/file/d/1eokaKj20tbFTn9jexQXIkONqwHeiBGS-/view?usp=sharing
STRING datasethttps://drive.google.com/file/d/1dBZqQeBuGf35_pGT6qJWSuX1At32t9CI/view?usp=sharing
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