René's URL Explorer Experiment


Title: GitHub - ZJUFanLab/scDeepSort: Cell-type Annotation for Single-cell Transcriptomics using Deep Learning with a Weighted Graph Neural Network

Open Graph Title: GitHub - ZJUFanLab/scDeepSort: Cell-type Annotation for Single-cell Transcriptomics using Deep Learning with a Weighted Graph Neural Network

X Title: GitHub - ZJUFanLab/scDeepSort: Cell-type Annotation for Single-cell Transcriptomics using Deep Learning with a Weighted Graph Neural Network

Description: Cell-type Annotation for Single-cell Transcriptomics using Deep Learning with a Weighted Graph Neural Network - ZJUFanLab/scDeepSort

Open Graph Description: Cell-type Annotation for Single-cell Transcriptomics using Deep Learning with a Weighted Graph Neural Network - ZJUFanLab/scDeepSort

X Description: Cell-type Annotation for Single-cell Transcriptomics using Deep Learning with a Weighted Graph Neural Network - ZJUFanLab/scDeepSort

Mail addresses
xin_shao@zju.edu.cn
capriceyhh@zju.edu.cn
zhuangxiang@zju.edu.cn

Opengraph URL: https://github.com/ZJUFanLab/scDeepSort

X: @github

direct link

Domain: patch-diff.githubusercontent.com

route-pattern/:user_id/:repository
route-controllerfiles
route-actiondisambiguate
fetch-noncev2:2504689c-d1cc-fd36-2c43-5acd73de7493
current-catalog-service-hashf3abb0cc802f3d7b95fc8762b94bdcb13bf39634c40c357301c4aa1d67a256fb
request-idE71C:333B3:C4F1E:10BCE9:6981D061
html-safe-nonce3bfbd320e8900de6a95ce5b70edd37b23a378be69b5f4cfecb69738833c03bc2
visitor-payloadeyJyZWZlcnJlciI6IiIsInJlcXVlc3RfaWQiOiJFNzFDOjMzM0IzOkM0RjFFOjEwQkNFOTo2OTgxRDA2MSIsInZpc2l0b3JfaWQiOiIxMzc3MDY4NDE5MjYxNzgwMDY1IiwicmVnaW9uX2VkZ2UiOiJpYWQiLCJyZWdpb25fcmVuZGVyIjoiaWFkIn0=
visitor-hmac180aa13c11ccc98a6d8b6f25ef9835934a14cb298fcc1305600f840fd5dcfaa2
hovercard-subject-tagrepository:256732044
github-keyboard-shortcutsrepository,copilot
google-site-verificationApib7-x98H0j5cPqHWwSMm6dNU4GmODRoqxLiDzdx9I
octolytics-urlhttps://collector.github.com/github/collect
analytics-location//
fb:app_id1401488693436528
apple-itunes-appapp-id=1477376905, app-argument=https://github.com/ZJUFanLab/scDeepSort
twitter:imagehttps://opengraph.githubassets.com/d089c8b0757e5462b50c0deff82e3c98decb4900aa5a699e5fc4fe31c9b7e776/ZJUFanLab/scDeepSort
twitter:cardsummary_large_image
og:imagehttps://opengraph.githubassets.com/d089c8b0757e5462b50c0deff82e3c98decb4900aa5a699e5fc4fe31c9b7e776/ZJUFanLab/scDeepSort
og:image:altCell-type Annotation for Single-cell Transcriptomics using Deep Learning with a Weighted Graph Neural Network - ZJUFanLab/scDeepSort
og:image:width1200
og:image:height600
og:site_nameGitHub
og:typeobject
hostnamegithub.com
expected-hostnamegithub.com
Noneebfdf8d3e0fd17b103f41cc6696d84938694ebebdfecaf11fe00dbe4a9785801
turbo-cache-controlno-preview
go-importgithub.com/ZJUFanLab/scDeepSort git https://github.com/ZJUFanLab/scDeepSort.git
octolytics-dimension-user_id53822310
octolytics-dimension-user_loginZJUFanLab
octolytics-dimension-repository_id256732044
octolytics-dimension-repository_nwoZJUFanLab/scDeepSort
octolytics-dimension-repository_publictrue
octolytics-dimension-repository_is_forkfalse
octolytics-dimension-repository_network_root_id256732044
octolytics-dimension-repository_network_root_nwoZJUFanLab/scDeepSort
turbo-body-classeslogged-out env-production page-responsive
disable-turbofalse
browser-stats-urlhttps://api.github.com/_private/browser/stats
browser-errors-urlhttps://api.github.com/_private/browser/errors
releaseac96edcf00b294dfaa8f1b86d06a198589e60041
ui-targetfull
theme-color#1e2327
color-schemelight dark

Links:

Skip to contenthttps://patch-diff.githubusercontent.com/ZJUFanLab/scDeepSort#start-of-content
https://patch-diff.githubusercontent.com/
Sign in https://patch-diff.githubusercontent.com/login?return_to=https%3A%2F%2Fgithub.com%2FZJUFanLab%2FscDeepSort
GitHub CopilotWrite better code with AIhttps://github.com/features/copilot
GitHub SparkBuild and deploy intelligent appshttps://github.com/features/spark
GitHub ModelsManage and compare promptshttps://github.com/features/models
MCP RegistryNewIntegrate external toolshttps://github.com/mcp
ActionsAutomate any workflowhttps://github.com/features/actions
CodespacesInstant dev environmentshttps://github.com/features/codespaces
IssuesPlan and track workhttps://github.com/features/issues
Code ReviewManage code changeshttps://github.com/features/code-review
GitHub Advanced SecurityFind and fix vulnerabilitieshttps://github.com/security/advanced-security
Code securitySecure your code as you buildhttps://github.com/security/advanced-security/code-security
Secret protectionStop leaks before they starthttps://github.com/security/advanced-security/secret-protection
Why GitHubhttps://github.com/why-github
Documentationhttps://docs.github.com
Bloghttps://github.blog
Changeloghttps://github.blog/changelog
Marketplacehttps://github.com/marketplace
View all featureshttps://github.com/features
Enterpriseshttps://github.com/enterprise
Small and medium teamshttps://github.com/team
Startupshttps://github.com/enterprise/startups
Nonprofitshttps://github.com/solutions/industry/nonprofits
App Modernizationhttps://github.com/solutions/use-case/app-modernization
DevSecOpshttps://github.com/solutions/use-case/devsecops
DevOpshttps://github.com/solutions/use-case/devops
CI/CDhttps://github.com/solutions/use-case/ci-cd
View all use caseshttps://github.com/solutions/use-case
Healthcarehttps://github.com/solutions/industry/healthcare
Financial serviceshttps://github.com/solutions/industry/financial-services
Manufacturinghttps://github.com/solutions/industry/manufacturing
Governmenthttps://github.com/solutions/industry/government
View all industrieshttps://github.com/solutions/industry
View all solutionshttps://github.com/solutions
AIhttps://github.com/resources/articles?topic=ai
Software Developmenthttps://github.com/resources/articles?topic=software-development
DevOpshttps://github.com/resources/articles?topic=devops
Securityhttps://github.com/resources/articles?topic=security
View all topicshttps://github.com/resources/articles
Customer storieshttps://github.com/customer-stories
Events & webinarshttps://github.com/resources/events
Ebooks & reportshttps://github.com/resources/whitepapers
Business insightshttps://github.com/solutions/executive-insights
GitHub Skillshttps://skills.github.com
Documentationhttps://docs.github.com
Customer supporthttps://support.github.com
Community forumhttps://github.com/orgs/community/discussions
Trust centerhttps://github.com/trust-center
Partnershttps://github.com/partners
GitHub SponsorsFund open source developershttps://github.com/sponsors
Security Labhttps://securitylab.github.com
Maintainer Communityhttps://maintainers.github.com
Acceleratorhttps://github.com/accelerator
Archive Programhttps://archiveprogram.github.com
Topicshttps://github.com/topics
Trendinghttps://github.com/trending
Collectionshttps://github.com/collections
Enterprise platformAI-powered developer platformhttps://github.com/enterprise
GitHub Advanced SecurityEnterprise-grade security featureshttps://github.com/security/advanced-security
Copilot for BusinessEnterprise-grade AI featureshttps://github.com/features/copilot/copilot-business
Premium SupportEnterprise-grade 24/7 supporthttps://github.com/premium-support
Pricinghttps://github.com/pricing
Search syntax tipshttps://docs.github.com/search-github/github-code-search/understanding-github-code-search-syntax
documentationhttps://docs.github.com/search-github/github-code-search/understanding-github-code-search-syntax
Sign in https://patch-diff.githubusercontent.com/login?return_to=https%3A%2F%2Fgithub.com%2FZJUFanLab%2FscDeepSort
Sign up https://patch-diff.githubusercontent.com/signup?ref_cta=Sign+up&ref_loc=header+logged+out&ref_page=%2F%3Cuser-name%3E%2F%3Crepo-name%3E&source=header-repo&source_repo=ZJUFanLab%2FscDeepSort
Reloadhttps://patch-diff.githubusercontent.com/ZJUFanLab/scDeepSort
Reloadhttps://patch-diff.githubusercontent.com/ZJUFanLab/scDeepSort
Reloadhttps://patch-diff.githubusercontent.com/ZJUFanLab/scDeepSort
ZJUFanLab https://patch-diff.githubusercontent.com/ZJUFanLab
scDeepSorthttps://patch-diff.githubusercontent.com/ZJUFanLab/scDeepSort
Notifications https://patch-diff.githubusercontent.com/login?return_to=%2FZJUFanLab%2FscDeepSort
Fork 20 https://patch-diff.githubusercontent.com/login?return_to=%2FZJUFanLab%2FscDeepSort
Star 106 https://patch-diff.githubusercontent.com/login?return_to=%2FZJUFanLab%2FscDeepSort
doi.org/10.1093/nar/gkab775https://doi.org/10.1093/nar/gkab775
GPL-3.0 license https://patch-diff.githubusercontent.com/ZJUFanLab/scDeepSort/blob/master/LICENSE
106 stars https://patch-diff.githubusercontent.com/ZJUFanLab/scDeepSort/stargazers
20 forks https://patch-diff.githubusercontent.com/ZJUFanLab/scDeepSort/forks
Branches https://patch-diff.githubusercontent.com/ZJUFanLab/scDeepSort/branches
Tags https://patch-diff.githubusercontent.com/ZJUFanLab/scDeepSort/tags
Activity https://patch-diff.githubusercontent.com/ZJUFanLab/scDeepSort/activity
Star https://patch-diff.githubusercontent.com/login?return_to=%2FZJUFanLab%2FscDeepSort
Notifications https://patch-diff.githubusercontent.com/login?return_to=%2FZJUFanLab%2FscDeepSort
Code https://patch-diff.githubusercontent.com/ZJUFanLab/scDeepSort
Issues 2 https://patch-diff.githubusercontent.com/ZJUFanLab/scDeepSort/issues
Pull requests 1 https://patch-diff.githubusercontent.com/ZJUFanLab/scDeepSort/pulls
Discussions https://patch-diff.githubusercontent.com/ZJUFanLab/scDeepSort/discussions
Actions https://patch-diff.githubusercontent.com/ZJUFanLab/scDeepSort/actions
Projects 0 https://patch-diff.githubusercontent.com/ZJUFanLab/scDeepSort/projects
Wiki https://patch-diff.githubusercontent.com/ZJUFanLab/scDeepSort/wiki
Security 0 https://patch-diff.githubusercontent.com/ZJUFanLab/scDeepSort/security
Insights https://patch-diff.githubusercontent.com/ZJUFanLab/scDeepSort/pulse
Code https://patch-diff.githubusercontent.com/ZJUFanLab/scDeepSort
Issues https://patch-diff.githubusercontent.com/ZJUFanLab/scDeepSort/issues
Pull requests https://patch-diff.githubusercontent.com/ZJUFanLab/scDeepSort/pulls
Discussions https://patch-diff.githubusercontent.com/ZJUFanLab/scDeepSort/discussions
Actions https://patch-diff.githubusercontent.com/ZJUFanLab/scDeepSort/actions
Projects https://patch-diff.githubusercontent.com/ZJUFanLab/scDeepSort/projects
Wiki https://patch-diff.githubusercontent.com/ZJUFanLab/scDeepSort/wiki
Security https://patch-diff.githubusercontent.com/ZJUFanLab/scDeepSort/security
Insights https://patch-diff.githubusercontent.com/ZJUFanLab/scDeepSort/pulse
Brancheshttps://patch-diff.githubusercontent.com/ZJUFanLab/scDeepSort/branches
Tagshttps://patch-diff.githubusercontent.com/ZJUFanLab/scDeepSort/tags
https://patch-diff.githubusercontent.com/ZJUFanLab/scDeepSort/branches
https://patch-diff.githubusercontent.com/ZJUFanLab/scDeepSort/tags
102 Commitshttps://patch-diff.githubusercontent.com/ZJUFanLab/scDeepSort/commits/master/
https://patch-diff.githubusercontent.com/ZJUFanLab/scDeepSort/commits/master/
Rhttps://patch-diff.githubusercontent.com/ZJUFanLab/scDeepSort/tree/master/R
Rhttps://patch-diff.githubusercontent.com/ZJUFanLab/scDeepSort/tree/master/R
docshttps://patch-diff.githubusercontent.com/ZJUFanLab/scDeepSort/tree/master/docs
docshttps://patch-diff.githubusercontent.com/ZJUFanLab/scDeepSort/tree/master/docs
maphttps://patch-diff.githubusercontent.com/ZJUFanLab/scDeepSort/tree/master/map
maphttps://patch-diff.githubusercontent.com/ZJUFanLab/scDeepSort/tree/master/map
modelshttps://patch-diff.githubusercontent.com/ZJUFanLab/scDeepSort/tree/master/models
modelshttps://patch-diff.githubusercontent.com/ZJUFanLab/scDeepSort/tree/master/models
testhttps://patch-diff.githubusercontent.com/ZJUFanLab/scDeepSort/tree/master/test
testhttps://patch-diff.githubusercontent.com/ZJUFanLab/scDeepSort/tree/master/test
trainhttps://patch-diff.githubusercontent.com/ZJUFanLab/scDeepSort/tree/master/train
trainhttps://patch-diff.githubusercontent.com/ZJUFanLab/scDeepSort/tree/master/train
utilshttps://patch-diff.githubusercontent.com/ZJUFanLab/scDeepSort/tree/master/utils
utilshttps://patch-diff.githubusercontent.com/ZJUFanLab/scDeepSort/tree/master/utils
LICENSEhttps://patch-diff.githubusercontent.com/ZJUFanLab/scDeepSort/blob/master/LICENSE
LICENSEhttps://patch-diff.githubusercontent.com/ZJUFanLab/scDeepSort/blob/master/LICENSE
README.mdhttps://patch-diff.githubusercontent.com/ZJUFanLab/scDeepSort/blob/master/README.md
README.mdhttps://patch-diff.githubusercontent.com/ZJUFanLab/scDeepSort/blob/master/README.md
pre-process.Rhttps://patch-diff.githubusercontent.com/ZJUFanLab/scDeepSort/blob/master/pre-process.R
pre-process.Rhttps://patch-diff.githubusercontent.com/ZJUFanLab/scDeepSort/blob/master/pre-process.R
predict.pyhttps://patch-diff.githubusercontent.com/ZJUFanLab/scDeepSort/blob/master/predict.py
predict.pyhttps://patch-diff.githubusercontent.com/ZJUFanLab/scDeepSort/blob/master/predict.py
requirements.txthttps://patch-diff.githubusercontent.com/ZJUFanLab/scDeepSort/blob/master/requirements.txt
requirements.txthttps://patch-diff.githubusercontent.com/ZJUFanLab/scDeepSort/blob/master/requirements.txt
train.pyhttps://patch-diff.githubusercontent.com/ZJUFanLab/scDeepSort/blob/master/train.py
train.pyhttps://patch-diff.githubusercontent.com/ZJUFanLab/scDeepSort/blob/master/train.py
READMEhttps://patch-diff.githubusercontent.com/ZJUFanLab/scDeepSort
GPL-3.0 licensehttps://patch-diff.githubusercontent.com/ZJUFanLab/scDeepSort
https://patch-diff.githubusercontent.com/ZJUFanLab/scDeepSort#scdeepsort
https://www.python.org/
https://www.r-project.org/
https://scdeepsort.readthedocs.io/en/master/index.htmlhttps://scdeepsort.readthedocs.io/en/master/index.html
https://patch-diff.githubusercontent.com/ZJUFanLab/scDeepSort#cell-type-annotation-for-single-cell-transcriptomics-using-deep-learning-with-a-weighted-graph-neural-network
https://doi.org/10.1093/nar/gkab775https://doi.org/10.1093/nar/gkab775
https://patch-diff.githubusercontent.com/ZJUFanLab/scDeepSort#install
https://github.com/scipy/scipy
https://github.com/pytorch/pytorch
https://github.com/numpy/numpy
https://github.com/pandas-dev/pandas
https://github.com/dmlc/dgl
https://github.com/scikit-learn/scikit-learn
https://github.com/python-excel/xlrd
scDeepSort-v1.0-cpu.tar.gzhttps://github.com/ZJUFanLab/scDeepSort/releases
releasehttps://github.com/ZJUFanLab/scDeepSort/releases
installation guidehttps://scdeepsort.readthedocs.io/en/master/installation.html
https://patch-diff.githubusercontent.com/ZJUFanLab/scDeepSort#usage
NCBI Gene databasehttps://www.ncbi.nlm.nih.gov/gene
pre-process.Rhttps://github.com/ZJUFanLab/scDeepSort/blob/dev/pre-process.R
DeepSortPredictorhttps://scdeepsort.readthedocs.io/en/master/api.html#deepsortpredictor
DeepSortClassifierhttps://scdeepsort.readthedocs.io/en/master/api.html#deepsortclassifier
documenthttps://scdeepsort.readthedocs.io/en/master/index.html
https://patch-diff.githubusercontent.com/ZJUFanLab/scDeepSort#note
wiki pagehttps://github.com/ZJUFanLab/scDeepSort/wiki
Human tissues and cell typeshttps://github.com/ZJUFanLab/scDeepSort/wiki/Human-tissues-and-cell-types
Mouse tissues and cell typeshttps://github.com/ZJUFanLab/scDeepSort/wiki/Mouse-tissues-and-cell-types
DeepSortClassifierhttps://scdeepsort.readthedocs.io/en/master/api.html#deepsortclassifier
dev branchhttps://github.com/ZJUFanLab/scDeepSort/tree/dev
https://patch-diff.githubusercontent.com/ZJUFanLab/scDeepSort#data-availability
https://github.com/ZJUFanLab/scDeepSort/releases/tag/scDeepSort
https://github.com/ZJUFanLab/scDeepSort/releases/tag/Pre_processed_data
Pre-processed datahttps://github.com/ZJUFanLab/scDeepSort/releases/tag/Pre_processed_data
https://patch-diff.githubusercontent.com/ZJUFanLab/scDeepSort#cite
PMID:34500471https://pubmed.ncbi.nlm.nih.gov/34500471/
doi.org/10.1093/nar/gkab775https://doi.org/10.1093/nar/gkab775
deep-learning https://patch-diff.githubusercontent.com/topics/deep-learning
annotation https://patch-diff.githubusercontent.com/topics/annotation
scrna-seq https://patch-diff.githubusercontent.com/topics/scrna-seq
transcriptomics https://patch-diff.githubusercontent.com/topics/transcriptomics
single-cell https://patch-diff.githubusercontent.com/topics/single-cell
cell-type-classification https://patch-diff.githubusercontent.com/topics/cell-type-classification
gnn https://patch-diff.githubusercontent.com/topics/gnn
graph-neural-network https://patch-diff.githubusercontent.com/topics/graph-neural-network
reference-free https://patch-diff.githubusercontent.com/topics/reference-free
Readme https://patch-diff.githubusercontent.com/ZJUFanLab/scDeepSort#readme-ov-file
GPL-3.0 license https://patch-diff.githubusercontent.com/ZJUFanLab/scDeepSort#GPL-3.0-1-ov-file
Please reload this pagehttps://patch-diff.githubusercontent.com/ZJUFanLab/scDeepSort
Activityhttps://patch-diff.githubusercontent.com/ZJUFanLab/scDeepSort/activity
106 starshttps://patch-diff.githubusercontent.com/ZJUFanLab/scDeepSort/stargazers
5 watchinghttps://patch-diff.githubusercontent.com/ZJUFanLab/scDeepSort/watchers
20 forkshttps://patch-diff.githubusercontent.com/ZJUFanLab/scDeepSort/forks
Report repository https://patch-diff.githubusercontent.com/contact/report-content?content_url=https%3A%2F%2Fgithub.com%2FZJUFanLab%2FscDeepSort&report=ZJUFanLab+%28user%29
Releases 2https://patch-diff.githubusercontent.com/ZJUFanLab/scDeepSort/releases
Pre-processed data Latest Aug 4, 2021 https://patch-diff.githubusercontent.com/ZJUFanLab/scDeepSort/releases/tag/Pre_processed_data
+ 1 releasehttps://patch-diff.githubusercontent.com/ZJUFanLab/scDeepSort/releases
Packages 0https://patch-diff.githubusercontent.com/users/ZJUFanLab/packages?repo_name=scDeepSort
Please reload this pagehttps://patch-diff.githubusercontent.com/ZJUFanLab/scDeepSort
Contributors 5https://patch-diff.githubusercontent.com/ZJUFanLab/scDeepSort/graphs/contributors
Please reload this pagehttps://patch-diff.githubusercontent.com/ZJUFanLab/scDeepSort
Python 92.7% https://patch-diff.githubusercontent.com/ZJUFanLab/scDeepSort/search?l=python
R 7.3% https://patch-diff.githubusercontent.com/ZJUFanLab/scDeepSort/search?l=r
https://github.com
Termshttps://docs.github.com/site-policy/github-terms/github-terms-of-service
Privacyhttps://docs.github.com/site-policy/privacy-policies/github-privacy-statement
Securityhttps://github.com/security
Statushttps://www.githubstatus.com/
Communityhttps://github.community/
Docshttps://docs.github.com/
Contacthttps://support.github.com?tags=dotcom-footer

Viewport: width=device-width


URLs of crawlers that visited me.