René's URL Explorer Experiment


Title: GitHub - SlavovLab/QuantQC: QuantQC is a package for quality control (QC) of single-cell proteomics data. It is optimized to work with nPOP, a method for massively parallel sample preparation on glass slides.

Open Graph Title: GitHub - SlavovLab/QuantQC: QuantQC is a package for quality control (QC) of single-cell proteomics data. It is optimized to work with nPOP, a method for massively parallel sample preparation on glass slides.

X Title: GitHub - SlavovLab/QuantQC: QuantQC is a package for quality control (QC) of single-cell proteomics data. It is optimized to work with nPOP, a method for massively parallel sample preparation on glass slides.

Description: QuantQC is a package for quality control (QC) of single-cell proteomics data. It is optimized to work with nPOP, a method for massively parallel sample preparation on glass slides. - SlavovLab/QuantQC

Open Graph Description: QuantQC is a package for quality control (QC) of single-cell proteomics data. It is optimized to work with nPOP, a method for massively parallel sample preparation on glass slides. - SlavovLab/QuantQC

X Description: QuantQC is a package for quality control (QC) of single-cell proteomics data. It is optimized to work with nPOP, a method for massively parallel sample preparation on glass slides. - SlavovLab/QuantQC

Opengraph URL: https://github.com/SlavovLab/QuantQC

X: @github

direct link

Domain: patch-diff.githubusercontent.com

route-pattern/:user_id/:repository
route-controllerfiles
route-actiondisambiguate
fetch-noncev2:146bcad5-6315-aab2-c404-dc1728e33c7f
current-catalog-service-hashf3abb0cc802f3d7b95fc8762b94bdcb13bf39634c40c357301c4aa1d67a256fb
request-idE224:3E0034:380C861:4CB81E7:698CAD38
html-safe-noncedd04f2e7a3abf0147c5c03b107889d29599f3d4b86f99307ac2755123b2616c8
visitor-payloadeyJyZWZlcnJlciI6IiIsInJlcXVlc3RfaWQiOiJFMjI0OjNFMDAzNDozODBDODYxOjRDQjgxRTc6Njk4Q0FEMzgiLCJ2aXNpdG9yX2lkIjoiMjAwNTkxNDgxODk1NTc1MDcxMiIsInJlZ2lvbl9lZGdlIjoiaWFkIiwicmVnaW9uX3JlbmRlciI6ImlhZCJ9
visitor-hmac481d58bbf7807152276700eedeebc7c5a26aa9ee77cd5f042f99a376b5e12d64
hovercard-subject-tagrepository:724247314
github-keyboard-shortcutsrepository,copilot
google-site-verificationApib7-x98H0j5cPqHWwSMm6dNU4GmODRoqxLiDzdx9I
octolytics-urlhttps://collector.github.com/github/collect
analytics-location//
fb:app_id1401488693436528
apple-itunes-appapp-id=1477376905, app-argument=https://github.com/SlavovLab/QuantQC
twitter:imagehttps://opengraph.githubassets.com/152184c63b9efda2c009f9864547a3de4e4a79e3c1a4e89c08d5307282dc03e8/SlavovLab/QuantQC
twitter:cardsummary_large_image
og:imagehttps://opengraph.githubassets.com/152184c63b9efda2c009f9864547a3de4e4a79e3c1a4e89c08d5307282dc03e8/SlavovLab/QuantQC
og:image:altQuantQC is a package for quality control (QC) of single-cell proteomics data. It is optimized to work with nPOP, a method for massively parallel sample preparation on glass slides. - SlavovLab/QuantQC
og:image:width1200
og:image:height600
og:site_nameGitHub
og:typeobject
hostnamegithub.com
expected-hostnamegithub.com
None640eeb7b6ff4d8d106235d228c0c286e82592d4d2403227b5b2b4fc5832297a4
turbo-cache-controlno-preview
go-importgithub.com/SlavovLab/QuantQC git https://github.com/SlavovLab/QuantQC.git
octolytics-dimension-user_id40698211
octolytics-dimension-user_loginSlavovLab
octolytics-dimension-repository_id724247314
octolytics-dimension-repository_nwoSlavovLab/QuantQC
octolytics-dimension-repository_publictrue
octolytics-dimension-repository_is_forkfalse
octolytics-dimension-repository_network_root_id724247314
octolytics-dimension-repository_network_root_nwoSlavovLab/QuantQC
turbo-body-classeslogged-out env-production page-responsive
disable-turbofalse
browser-stats-urlhttps://api.github.com/_private/browser/stats
browser-errors-urlhttps://api.github.com/_private/browser/errors
release3d444f0a47beeeac94cddbb51c91ab408befe8d4
ui-targetfull
theme-color#1e2327
color-schemelight dark

Links:

Skip to contenthttps://patch-diff.githubusercontent.com/SlavovLab/QuantQC#start-of-content
https://patch-diff.githubusercontent.com/
Sign in https://patch-diff.githubusercontent.com/login?return_to=https%3A%2F%2Fgithub.com%2FSlavovLab%2FQuantQC
GitHub CopilotWrite better code with AIhttps://github.com/features/copilot
GitHub SparkBuild and deploy intelligent appshttps://github.com/features/spark
GitHub ModelsManage and compare promptshttps://github.com/features/models
MCP RegistryNewIntegrate external toolshttps://github.com/mcp
ActionsAutomate any workflowhttps://github.com/features/actions
CodespacesInstant dev environmentshttps://github.com/features/codespaces
IssuesPlan and track workhttps://github.com/features/issues
Code ReviewManage code changeshttps://github.com/features/code-review
GitHub Advanced SecurityFind and fix vulnerabilitieshttps://github.com/security/advanced-security
Code securitySecure your code as you buildhttps://github.com/security/advanced-security/code-security
Secret protectionStop leaks before they starthttps://github.com/security/advanced-security/secret-protection
Why GitHubhttps://github.com/why-github
Documentationhttps://docs.github.com
Bloghttps://github.blog
Changeloghttps://github.blog/changelog
Marketplacehttps://github.com/marketplace
View all featureshttps://github.com/features
Enterpriseshttps://github.com/enterprise
Small and medium teamshttps://github.com/team
Startupshttps://github.com/enterprise/startups
Nonprofitshttps://github.com/solutions/industry/nonprofits
App Modernizationhttps://github.com/solutions/use-case/app-modernization
DevSecOpshttps://github.com/solutions/use-case/devsecops
DevOpshttps://github.com/solutions/use-case/devops
CI/CDhttps://github.com/solutions/use-case/ci-cd
View all use caseshttps://github.com/solutions/use-case
Healthcarehttps://github.com/solutions/industry/healthcare
Financial serviceshttps://github.com/solutions/industry/financial-services
Manufacturinghttps://github.com/solutions/industry/manufacturing
Governmenthttps://github.com/solutions/industry/government
View all industrieshttps://github.com/solutions/industry
View all solutionshttps://github.com/solutions
AIhttps://github.com/resources/articles?topic=ai
Software Developmenthttps://github.com/resources/articles?topic=software-development
DevOpshttps://github.com/resources/articles?topic=devops
Securityhttps://github.com/resources/articles?topic=security
View all topicshttps://github.com/resources/articles
Customer storieshttps://github.com/customer-stories
Events & webinarshttps://github.com/resources/events
Ebooks & reportshttps://github.com/resources/whitepapers
Business insightshttps://github.com/solutions/executive-insights
GitHub Skillshttps://skills.github.com
Documentationhttps://docs.github.com
Customer supporthttps://support.github.com
Community forumhttps://github.com/orgs/community/discussions
Trust centerhttps://github.com/trust-center
Partnershttps://github.com/partners
GitHub SponsorsFund open source developershttps://github.com/sponsors
Security Labhttps://securitylab.github.com
Maintainer Communityhttps://maintainers.github.com
Acceleratorhttps://github.com/accelerator
Archive Programhttps://archiveprogram.github.com
Topicshttps://github.com/topics
Trendinghttps://github.com/trending
Collectionshttps://github.com/collections
Enterprise platformAI-powered developer platformhttps://github.com/enterprise
GitHub Advanced SecurityEnterprise-grade security featureshttps://github.com/security/advanced-security
Copilot for BusinessEnterprise-grade AI featureshttps://github.com/features/copilot/copilot-business
Premium SupportEnterprise-grade 24/7 supporthttps://github.com/premium-support
Pricinghttps://github.com/pricing
Search syntax tipshttps://docs.github.com/search-github/github-code-search/understanding-github-code-search-syntax
documentationhttps://docs.github.com/search-github/github-code-search/understanding-github-code-search-syntax
Sign in https://patch-diff.githubusercontent.com/login?return_to=https%3A%2F%2Fgithub.com%2FSlavovLab%2FQuantQC
Sign up https://patch-diff.githubusercontent.com/signup?ref_cta=Sign+up&ref_loc=header+logged+out&ref_page=%2F%3Cuser-name%3E%2F%3Crepo-name%3E&source=header-repo&source_repo=SlavovLab%2FQuantQC
Reloadhttps://patch-diff.githubusercontent.com/SlavovLab/QuantQC
Reloadhttps://patch-diff.githubusercontent.com/SlavovLab/QuantQC
Reloadhttps://patch-diff.githubusercontent.com/SlavovLab/QuantQC
SlavovLab https://patch-diff.githubusercontent.com/SlavovLab
QuantQChttps://patch-diff.githubusercontent.com/SlavovLab/QuantQC
Notifications https://patch-diff.githubusercontent.com/login?return_to=%2FSlavovLab%2FQuantQC
Fork 2 https://patch-diff.githubusercontent.com/login?return_to=%2FSlavovLab%2FQuantQC
Star 6 https://patch-diff.githubusercontent.com/login?return_to=%2FSlavovLab%2FQuantQC
scp.slavovlab.net/QuantQChttps://scp.slavovlab.net/QuantQC
6 stars https://patch-diff.githubusercontent.com/SlavovLab/QuantQC/stargazers
2 forks https://patch-diff.githubusercontent.com/SlavovLab/QuantQC/forks
Branches https://patch-diff.githubusercontent.com/SlavovLab/QuantQC/branches
Tags https://patch-diff.githubusercontent.com/SlavovLab/QuantQC/tags
Activity https://patch-diff.githubusercontent.com/SlavovLab/QuantQC/activity
Star https://patch-diff.githubusercontent.com/login?return_to=%2FSlavovLab%2FQuantQC
Notifications https://patch-diff.githubusercontent.com/login?return_to=%2FSlavovLab%2FQuantQC
Code https://patch-diff.githubusercontent.com/SlavovLab/QuantQC
Issues 2 https://patch-diff.githubusercontent.com/SlavovLab/QuantQC/issues
Pull requests 0 https://patch-diff.githubusercontent.com/SlavovLab/QuantQC/pulls
Actions https://patch-diff.githubusercontent.com/SlavovLab/QuantQC/actions
Projects 0 https://patch-diff.githubusercontent.com/SlavovLab/QuantQC/projects
Security 0 https://patch-diff.githubusercontent.com/SlavovLab/QuantQC/security
Insights https://patch-diff.githubusercontent.com/SlavovLab/QuantQC/pulse
Code https://patch-diff.githubusercontent.com/SlavovLab/QuantQC
Issues https://patch-diff.githubusercontent.com/SlavovLab/QuantQC/issues
Pull requests https://patch-diff.githubusercontent.com/SlavovLab/QuantQC/pulls
Actions https://patch-diff.githubusercontent.com/SlavovLab/QuantQC/actions
Projects https://patch-diff.githubusercontent.com/SlavovLab/QuantQC/projects
Security https://patch-diff.githubusercontent.com/SlavovLab/QuantQC/security
Insights https://patch-diff.githubusercontent.com/SlavovLab/QuantQC/pulse
Brancheshttps://patch-diff.githubusercontent.com/SlavovLab/QuantQC/branches
Tagshttps://patch-diff.githubusercontent.com/SlavovLab/QuantQC/tags
https://patch-diff.githubusercontent.com/SlavovLab/QuantQC/branches
https://patch-diff.githubusercontent.com/SlavovLab/QuantQC/tags
36 Commitshttps://patch-diff.githubusercontent.com/SlavovLab/QuantQC/commits/main/
https://patch-diff.githubusercontent.com/SlavovLab/QuantQC/commits/main/
AnalysisFromPaperhttps://patch-diff.githubusercontent.com/SlavovLab/QuantQC/tree/main/AnalysisFromPaper
AnalysisFromPaperhttps://patch-diff.githubusercontent.com/SlavovLab/QuantQC/tree/main/AnalysisFromPaper
Rhttps://patch-diff.githubusercontent.com/SlavovLab/QuantQC/tree/main/R
Rhttps://patch-diff.githubusercontent.com/SlavovLab/QuantQC/tree/main/R
imghttps://patch-diff.githubusercontent.com/SlavovLab/QuantQC/tree/main/img
imghttps://patch-diff.githubusercontent.com/SlavovLab/QuantQC/tree/main/img
insthttps://patch-diff.githubusercontent.com/SlavovLab/QuantQC/tree/main/inst
insthttps://patch-diff.githubusercontent.com/SlavovLab/QuantQC/tree/main/inst
manhttps://patch-diff.githubusercontent.com/SlavovLab/QuantQC/tree/main/man
manhttps://patch-diff.githubusercontent.com/SlavovLab/QuantQC/tree/main/man
tutorialhttps://patch-diff.githubusercontent.com/SlavovLab/QuantQC/tree/main/tutorial
tutorialhttps://patch-diff.githubusercontent.com/SlavovLab/QuantQC/tree/main/tutorial
DESCRIPTIONhttps://patch-diff.githubusercontent.com/SlavovLab/QuantQC/blob/main/DESCRIPTION
DESCRIPTIONhttps://patch-diff.githubusercontent.com/SlavovLab/QuantQC/blob/main/DESCRIPTION
NAMESPACEhttps://patch-diff.githubusercontent.com/SlavovLab/QuantQC/blob/main/NAMESPACE
NAMESPACEhttps://patch-diff.githubusercontent.com/SlavovLab/QuantQC/blob/main/NAMESPACE
QuantQC.Rprojhttps://patch-diff.githubusercontent.com/SlavovLab/QuantQC/blob/main/QuantQC.Rproj
QuantQC.Rprojhttps://patch-diff.githubusercontent.com/SlavovLab/QuantQC/blob/main/QuantQC.Rproj
README.mdhttps://patch-diff.githubusercontent.com/SlavovLab/QuantQC/blob/main/README.md
README.mdhttps://patch-diff.githubusercontent.com/SlavovLab/QuantQC/blob/main/README.md
readmehttps://patch-diff.githubusercontent.com/SlavovLab/QuantQC/blob/main/readme
readmehttps://patch-diff.githubusercontent.com/SlavovLab/QuantQC/blob/main/readme
READMEhttps://patch-diff.githubusercontent.com/SlavovLab/QuantQC
https://patch-diff.githubusercontent.com/SlavovLab/QuantQC#quantqc-npop-sample-preparation-evaluation-pipline
nPOP sample preparation Websitehttps://scp.slavovlab.net/nPOP
Download data from origninal publicationhttps://scp.slavovlab.net/Leduc_et_al_2022
Download data from protocolhttps://scp.slavovlab.net/Leduc_et_al_2022
Preprint of Protocolhttps://scp.slavovlab.net/Leduc_et_al_2022
Preprint Original Articlehttps://www.biorxiv.org/content/10.1101/2021.11.03.467007v2
Genome Biology Articlehttps://genomebiology.biomedcentral.com/articles/10.1186/s13059-022-02817-5
Nature Communications Articlehttps://www.nature.com/articles/s41467-025-56736-7
https://github.com/Andrew-Leduc/QuantQC/blob/main/img/head.png?raw=true
https://patch-diff.githubusercontent.com/SlavovLab/QuantQC#requirements
R Project pagehttps://www.r-project.org/
RStudio Applicationhttps://www.rstudio.com/products/rstudio/download/
Seurathttps://satijalab.org/seurat/articles/install.html
DIANN r packagehttps://github.com/vdemichev/diann-rpackage
https://patch-diff.githubusercontent.com/SlavovLab/QuantQC#reproducing-the-data-analysis
MSV000093494https://massive.ucsd.edu/ProteoSAFe/dataset.jsp?task=ac44b779d8a04ca285a263616796c3b8
QuantQChttps://github.com/Andrew-Leduc/QuantQC
https://patch-diff.githubusercontent.com/SlavovLab/QuantQC#about-the-project
Leduc et al., 2023https://www.biorxiv.org/content/10.1101/2024.07.26.605378v1
10.1038/s41467-025-56736-7https://www.nature.com/articles/s41467-025-56736-7
Slavov Laboratoryhttps://slavovlab.net
Andrew Leduchttps://coe.northeastern.edu/people/slavov-nikolai/
https://patch-diff.githubusercontent.com/SlavovLab/QuantQC#license
MIT licensehttps://github.com/SlavovLab/DO-MS/blob/master/LICENSE
https://patch-diff.githubusercontent.com/SlavovLab/QuantQC#contributing
https://patch-diff.githubusercontent.com/SlavovLab/QuantQC#help
GitHub issue systemhttps://github.com/SlavovLab/plexDIA/issues
scp.slavovlab.net/QuantQChttps://scp.slavovlab.net/QuantQC
quality-control https://patch-diff.githubusercontent.com/topics/quality-control
mass-spectrometry https://patch-diff.githubusercontent.com/topics/mass-spectrometry
omics https://patch-diff.githubusercontent.com/topics/omics
sample-preparation https://patch-diff.githubusercontent.com/topics/sample-preparation
single-cell-analysis https://patch-diff.githubusercontent.com/topics/single-cell-analysis
single-cell-omics https://patch-diff.githubusercontent.com/topics/single-cell-omics
proteomics-data-analysis https://patch-diff.githubusercontent.com/topics/proteomics-data-analysis
proteomi https://patch-diff.githubusercontent.com/topics/proteomi
Readme https://patch-diff.githubusercontent.com/SlavovLab/QuantQC#readme-ov-file
Please reload this pagehttps://patch-diff.githubusercontent.com/SlavovLab/QuantQC
Activityhttps://patch-diff.githubusercontent.com/SlavovLab/QuantQC/activity
Custom propertieshttps://patch-diff.githubusercontent.com/SlavovLab/QuantQC/custom-properties
6 starshttps://patch-diff.githubusercontent.com/SlavovLab/QuantQC/stargazers
1 watchinghttps://patch-diff.githubusercontent.com/SlavovLab/QuantQC/watchers
2 forkshttps://patch-diff.githubusercontent.com/SlavovLab/QuantQC/forks
Report repository https://patch-diff.githubusercontent.com/contact/report-content?content_url=https%3A%2F%2Fgithub.com%2FSlavovLab%2FQuantQC&report=SlavovLab+%28user%29
Releaseshttps://patch-diff.githubusercontent.com/SlavovLab/QuantQC/releases
Packages 0https://patch-diff.githubusercontent.com/orgs/SlavovLab/packages?repo_name=QuantQC
Contributors 2https://patch-diff.githubusercontent.com/SlavovLab/QuantQC/graphs/contributors
Please reload this pagehttps://patch-diff.githubusercontent.com/SlavovLab/QuantQC
HTML 92.9% https://patch-diff.githubusercontent.com/SlavovLab/QuantQC/search?l=html
R 7.1% https://patch-diff.githubusercontent.com/SlavovLab/QuantQC/search?l=r
https://github.com
Termshttps://docs.github.com/site-policy/github-terms/github-terms-of-service
Privacyhttps://docs.github.com/site-policy/privacy-policies/github-privacy-statement
Securityhttps://github.com/security
Statushttps://www.githubstatus.com/
Communityhttps://github.community/
Docshttps://docs.github.com/
Contacthttps://support.github.com?tags=dotcom-footer

Viewport: width=device-width


URLs of crawlers that visited me.