René's URL Explorer Experiment


Title: GitHub - SlavovLab/DART-ID: DART-ID: retention time alignment and peptide identification confidence updates

Open Graph Title: GitHub - SlavovLab/DART-ID: DART-ID: retention time alignment and peptide identification confidence updates

X Title: GitHub - SlavovLab/DART-ID: DART-ID: retention time alignment and peptide identification confidence updates

Description: DART-ID: retention time alignment and peptide identification confidence updates - SlavovLab/DART-ID

Open Graph Description: DART-ID: retention time alignment and peptide identification confidence updates - SlavovLab/DART-ID

X Description: DART-ID: retention time alignment and peptide identification confidence updates - SlavovLab/DART-ID

Mail addresses
nslavov@northeastern.edu

Opengraph URL: https://github.com/SlavovLab/DART-ID

X: @github

direct link

Domain: patch-diff.githubusercontent.com

route-pattern/:user_id/:repository
route-controllerfiles
route-actiondisambiguate
fetch-noncev2:25f0f018-4066-e130-cd8b-df58346d78b6
current-catalog-service-hashf3abb0cc802f3d7b95fc8762b94bdcb13bf39634c40c357301c4aa1d67a256fb
request-id90EE:5A7E8:2565723:3353355:698CE499
html-safe-nonce4807dbfa4c09d748d5e0a35502da5a20e9a014b75bc3206682cf04d28f07a683
visitor-payloadeyJyZWZlcnJlciI6IiIsInJlcXVlc3RfaWQiOiI5MEVFOjVBN0U4OjI1NjU3MjM6MzM1MzM1NTo2OThDRTQ5OSIsInZpc2l0b3JfaWQiOiI0OTMwNDU0MDk0ODYwODM4MDQxIiwicmVnaW9uX2VkZ2UiOiJpYWQiLCJyZWdpb25fcmVuZGVyIjoiaWFkIn0=
visitor-hmace041bbc05d4000b39752db09235f33157298ab7c91bf2f6da703ad4422fc8f6e
hovercard-subject-tagrepository:94229474
github-keyboard-shortcutsrepository,copilot
google-site-verificationApib7-x98H0j5cPqHWwSMm6dNU4GmODRoqxLiDzdx9I
octolytics-urlhttps://collector.github.com/github/collect
analytics-location//
fb:app_id1401488693436528
apple-itunes-appapp-id=1477376905, app-argument=https://github.com/SlavovLab/DART-ID
twitter:imagehttps://repository-images.githubusercontent.com/94229474/48ec0e80-64ec-11e9-90ca-c6907572acad
twitter:cardsummary_large_image
og:imagehttps://repository-images.githubusercontent.com/94229474/48ec0e80-64ec-11e9-90ca-c6907572acad
og:image:altDART-ID: retention time alignment and peptide identification confidence updates - SlavovLab/DART-ID
og:site_nameGitHub
og:typeobject
hostnamegithub.com
expected-hostnamegithub.com
None640eeb7b6ff4d8d106235d228c0c286e82592d4d2403227b5b2b4fc5832297a4
turbo-cache-controlno-preview
go-importgithub.com/SlavovLab/DART-ID git https://github.com/SlavovLab/DART-ID.git
octolytics-dimension-user_id40698211
octolytics-dimension-user_loginSlavovLab
octolytics-dimension-repository_id94229474
octolytics-dimension-repository_nwoSlavovLab/DART-ID
octolytics-dimension-repository_publictrue
octolytics-dimension-repository_is_forkfalse
octolytics-dimension-repository_network_root_id94229474
octolytics-dimension-repository_network_root_nwoSlavovLab/DART-ID
turbo-body-classeslogged-out env-production page-responsive
disable-turbofalse
browser-stats-urlhttps://api.github.com/_private/browser/stats
browser-errors-urlhttps://api.github.com/_private/browser/errors
release3d444f0a47beeeac94cddbb51c91ab408befe8d4
ui-targetfull
theme-color#1e2327
color-schemelight dark

Links:

Skip to contenthttps://patch-diff.githubusercontent.com/SlavovLab/DART-ID#start-of-content
https://patch-diff.githubusercontent.com/
Sign in https://patch-diff.githubusercontent.com/login?return_to=https%3A%2F%2Fgithub.com%2FSlavovLab%2FDART-ID
GitHub CopilotWrite better code with AIhttps://github.com/features/copilot
GitHub SparkBuild and deploy intelligent appshttps://github.com/features/spark
GitHub ModelsManage and compare promptshttps://github.com/features/models
MCP RegistryNewIntegrate external toolshttps://github.com/mcp
ActionsAutomate any workflowhttps://github.com/features/actions
CodespacesInstant dev environmentshttps://github.com/features/codespaces
IssuesPlan and track workhttps://github.com/features/issues
Code ReviewManage code changeshttps://github.com/features/code-review
GitHub Advanced SecurityFind and fix vulnerabilitieshttps://github.com/security/advanced-security
Code securitySecure your code as you buildhttps://github.com/security/advanced-security/code-security
Secret protectionStop leaks before they starthttps://github.com/security/advanced-security/secret-protection
Why GitHubhttps://github.com/why-github
Documentationhttps://docs.github.com
Bloghttps://github.blog
Changeloghttps://github.blog/changelog
Marketplacehttps://github.com/marketplace
View all featureshttps://github.com/features
Enterpriseshttps://github.com/enterprise
Small and medium teamshttps://github.com/team
Startupshttps://github.com/enterprise/startups
Nonprofitshttps://github.com/solutions/industry/nonprofits
App Modernizationhttps://github.com/solutions/use-case/app-modernization
DevSecOpshttps://github.com/solutions/use-case/devsecops
DevOpshttps://github.com/solutions/use-case/devops
CI/CDhttps://github.com/solutions/use-case/ci-cd
View all use caseshttps://github.com/solutions/use-case
Healthcarehttps://github.com/solutions/industry/healthcare
Financial serviceshttps://github.com/solutions/industry/financial-services
Manufacturinghttps://github.com/solutions/industry/manufacturing
Governmenthttps://github.com/solutions/industry/government
View all industrieshttps://github.com/solutions/industry
View all solutionshttps://github.com/solutions
AIhttps://github.com/resources/articles?topic=ai
Software Developmenthttps://github.com/resources/articles?topic=software-development
DevOpshttps://github.com/resources/articles?topic=devops
Securityhttps://github.com/resources/articles?topic=security
View all topicshttps://github.com/resources/articles
Customer storieshttps://github.com/customer-stories
Events & webinarshttps://github.com/resources/events
Ebooks & reportshttps://github.com/resources/whitepapers
Business insightshttps://github.com/solutions/executive-insights
GitHub Skillshttps://skills.github.com
Documentationhttps://docs.github.com
Customer supporthttps://support.github.com
Community forumhttps://github.com/orgs/community/discussions
Trust centerhttps://github.com/trust-center
Partnershttps://github.com/partners
GitHub SponsorsFund open source developershttps://github.com/sponsors
Security Labhttps://securitylab.github.com
Maintainer Communityhttps://maintainers.github.com
Acceleratorhttps://github.com/accelerator
Archive Programhttps://archiveprogram.github.com
Topicshttps://github.com/topics
Trendinghttps://github.com/trending
Collectionshttps://github.com/collections
Enterprise platformAI-powered developer platformhttps://github.com/enterprise
GitHub Advanced SecurityEnterprise-grade security featureshttps://github.com/security/advanced-security
Copilot for BusinessEnterprise-grade AI featureshttps://github.com/features/copilot/copilot-business
Premium SupportEnterprise-grade 24/7 supporthttps://github.com/premium-support
Pricinghttps://github.com/pricing
Search syntax tipshttps://docs.github.com/search-github/github-code-search/understanding-github-code-search-syntax
documentationhttps://docs.github.com/search-github/github-code-search/understanding-github-code-search-syntax
Sign in https://patch-diff.githubusercontent.com/login?return_to=https%3A%2F%2Fgithub.com%2FSlavovLab%2FDART-ID
Sign up https://patch-diff.githubusercontent.com/signup?ref_cta=Sign+up&ref_loc=header+logged+out&ref_page=%2F%3Cuser-name%3E%2F%3Crepo-name%3E&source=header-repo&source_repo=SlavovLab%2FDART-ID
Reloadhttps://patch-diff.githubusercontent.com/SlavovLab/DART-ID
Reloadhttps://patch-diff.githubusercontent.com/SlavovLab/DART-ID
Reloadhttps://patch-diff.githubusercontent.com/SlavovLab/DART-ID
SlavovLab https://patch-diff.githubusercontent.com/SlavovLab
DART-IDhttps://patch-diff.githubusercontent.com/SlavovLab/DART-ID
Notifications https://patch-diff.githubusercontent.com/login?return_to=%2FSlavovLab%2FDART-ID
Fork 4 https://patch-diff.githubusercontent.com/login?return_to=%2FSlavovLab%2FDART-ID
Star 18 https://patch-diff.githubusercontent.com/login?return_to=%2FSlavovLab%2FDART-ID
dart-id.slavovlab.nethttps://dart-id.slavovlab.net
MIT license https://patch-diff.githubusercontent.com/SlavovLab/DART-ID/blob/master/LICENSE.txt
18 stars https://patch-diff.githubusercontent.com/SlavovLab/DART-ID/stargazers
4 forks https://patch-diff.githubusercontent.com/SlavovLab/DART-ID/forks
Branches https://patch-diff.githubusercontent.com/SlavovLab/DART-ID/branches
Tags https://patch-diff.githubusercontent.com/SlavovLab/DART-ID/tags
Activity https://patch-diff.githubusercontent.com/SlavovLab/DART-ID/activity
Star https://patch-diff.githubusercontent.com/login?return_to=%2FSlavovLab%2FDART-ID
Notifications https://patch-diff.githubusercontent.com/login?return_to=%2FSlavovLab%2FDART-ID
Code https://patch-diff.githubusercontent.com/SlavovLab/DART-ID
Issues 4 https://patch-diff.githubusercontent.com/SlavovLab/DART-ID/issues
Pull requests 4 https://patch-diff.githubusercontent.com/SlavovLab/DART-ID/pulls
Actions https://patch-diff.githubusercontent.com/SlavovLab/DART-ID/actions
Projects 0 https://patch-diff.githubusercontent.com/SlavovLab/DART-ID/projects
Wiki https://patch-diff.githubusercontent.com/SlavovLab/DART-ID/wiki
Security 0 https://patch-diff.githubusercontent.com/SlavovLab/DART-ID/security
Insights https://patch-diff.githubusercontent.com/SlavovLab/DART-ID/pulse
Code https://patch-diff.githubusercontent.com/SlavovLab/DART-ID
Issues https://patch-diff.githubusercontent.com/SlavovLab/DART-ID/issues
Pull requests https://patch-diff.githubusercontent.com/SlavovLab/DART-ID/pulls
Actions https://patch-diff.githubusercontent.com/SlavovLab/DART-ID/actions
Projects https://patch-diff.githubusercontent.com/SlavovLab/DART-ID/projects
Wiki https://patch-diff.githubusercontent.com/SlavovLab/DART-ID/wiki
Security https://patch-diff.githubusercontent.com/SlavovLab/DART-ID/security
Insights https://patch-diff.githubusercontent.com/SlavovLab/DART-ID/pulse
Brancheshttps://patch-diff.githubusercontent.com/SlavovLab/DART-ID/branches
Tagshttps://patch-diff.githubusercontent.com/SlavovLab/DART-ID/tags
https://patch-diff.githubusercontent.com/SlavovLab/DART-ID/branches
https://patch-diff.githubusercontent.com/SlavovLab/DART-ID/tags
373 Commitshttps://patch-diff.githubusercontent.com/SlavovLab/DART-ID/commits/master/
https://patch-diff.githubusercontent.com/SlavovLab/DART-ID/commits/master/
config_fileshttps://patch-diff.githubusercontent.com/SlavovLab/DART-ID/tree/master/config_files
config_fileshttps://patch-diff.githubusercontent.com/SlavovLab/DART-ID/tree/master/config_files
dart_idhttps://patch-diff.githubusercontent.com/SlavovLab/DART-ID/tree/master/dart_id
dart_idhttps://patch-diff.githubusercontent.com/SlavovLab/DART-ID/tree/master/dart_id
docshttps://patch-diff.githubusercontent.com/SlavovLab/DART-ID/tree/master/docs
docshttps://patch-diff.githubusercontent.com/SlavovLab/DART-ID/tree/master/docs
examplehttps://patch-diff.githubusercontent.com/SlavovLab/DART-ID/tree/master/example
examplehttps://patch-diff.githubusercontent.com/SlavovLab/DART-ID/tree/master/example
.gitattributeshttps://patch-diff.githubusercontent.com/SlavovLab/DART-ID/blob/master/.gitattributes
.gitattributeshttps://patch-diff.githubusercontent.com/SlavovLab/DART-ID/blob/master/.gitattributes
.gitignorehttps://patch-diff.githubusercontent.com/SlavovLab/DART-ID/blob/master/.gitignore
.gitignorehttps://patch-diff.githubusercontent.com/SlavovLab/DART-ID/blob/master/.gitignore
LICENSE.txthttps://patch-diff.githubusercontent.com/SlavovLab/DART-ID/blob/master/LICENSE.txt
LICENSE.txthttps://patch-diff.githubusercontent.com/SlavovLab/DART-ID/blob/master/LICENSE.txt
MANIFEST.inhttps://patch-diff.githubusercontent.com/SlavovLab/DART-ID/blob/master/MANIFEST.in
MANIFEST.inhttps://patch-diff.githubusercontent.com/SlavovLab/DART-ID/blob/master/MANIFEST.in
README.mdhttps://patch-diff.githubusercontent.com/SlavovLab/DART-ID/blob/master/README.md
README.mdhttps://patch-diff.githubusercontent.com/SlavovLab/DART-ID/blob/master/README.md
dart_id.shhttps://patch-diff.githubusercontent.com/SlavovLab/DART-ID/blob/master/dart_id.sh
dart_id.shhttps://patch-diff.githubusercontent.com/SlavovLab/DART-ID/blob/master/dart_id.sh
environment.ymlhttps://patch-diff.githubusercontent.com/SlavovLab/DART-ID/blob/master/environment.yml
environment.ymlhttps://patch-diff.githubusercontent.com/SlavovLab/DART-ID/blob/master/environment.yml
requirements.txthttps://patch-diff.githubusercontent.com/SlavovLab/DART-ID/blob/master/requirements.txt
requirements.txthttps://patch-diff.githubusercontent.com/SlavovLab/DART-ID/blob/master/requirements.txt
set_environment.shhttps://patch-diff.githubusercontent.com/SlavovLab/DART-ID/blob/master/set_environment.sh
set_environment.shhttps://patch-diff.githubusercontent.com/SlavovLab/DART-ID/blob/master/set_environment.sh
setup.cfghttps://patch-diff.githubusercontent.com/SlavovLab/DART-ID/blob/master/setup.cfg
setup.cfghttps://patch-diff.githubusercontent.com/SlavovLab/DART-ID/blob/master/setup.cfg
setup.pyhttps://patch-diff.githubusercontent.com/SlavovLab/DART-ID/blob/master/setup.py
setup.pyhttps://patch-diff.githubusercontent.com/SlavovLab/DART-ID/blob/master/setup.py
READMEhttps://patch-diff.githubusercontent.com/SlavovLab/DART-ID
MIT licensehttps://patch-diff.githubusercontent.com/SlavovLab/DART-ID
https://patch-diff.githubusercontent.com/SlavovLab/DART-ID#dart-id
https://camo.githubusercontent.com/5907938f305def0b346fc509f2461f82dfd1fddc03a84a689e683ffa5b5c5ccc/68747470733a2f2f696d672e736869656c64732e696f2f6769746875622f72656c656173652f536c61766f764c61622f444152542d49442e737667
https://camo.githubusercontent.com/54bf056855c4d11f06e1e64ae3822e8a69453ccebb48985e932f133677fd0313/68747470733a2f2f696d672e736869656c64732e696f2f707970692f762f646172742d69642e737667
https://camo.githubusercontent.com/c4e55ea6544ce0c0dfb049153fbad42e9e36d21d6f20bdbdd0f7ba087bfa7809/68747470733a2f2f696d672e736869656c64732e696f2f707970692f646d2f646172742d69642e737667
https://camo.githubusercontent.com/a626ebc061b82035702ea1f4601b3ea00ebc79bcb70e612c055394614c532706/68747470733a2f2f696d672e736869656c64732e696f2f6769746875622f6c6963656e73652f536c61766f764c61622f444152542d49442e737667
https://dart-id.slavovlab.nethttps://dart-id.slavovlab.net
https://doi.org/10.1371/journal.pcbi.1007082https://doi.org/10.1371/journal.pcbi.1007082
https://www.biorxiv.org/content/10.1101/399121v3https://www.biorxiv.org/content/10.1101/399121v3
https://patch-diff.githubusercontent.com/SlavovLab/DART-ID#getting-started
https://patch-diff.githubusercontent.com/SlavovLab/DART-ID#dependencies
miniconda distribution recommendedhttps://docs.conda.io/en/latest/miniconda.html
https://patch-diff.githubusercontent.com/SlavovLab/DART-ID#installation
PyPIhttps://pypi.org/project/dart-id/
piphttps://pip.pypa.io/en/stable/installing/
https://patch-diff.githubusercontent.com/SlavovLab/DART-ID#usage
example/config_annotated.yamlhttps://github.com/SlavovLab/DART-ID/blob/master/example/config_annotated.yaml
https://patch-diff.githubusercontent.com/SlavovLab/DART-ID#example-runs
https://github.com/SlavovLab/DART-ID/blob/master/config_files/example_sqc_67_95_varied.yamlhttps://raw.githubusercontent.com/SlavovLab/DART-ID/master/config_files/example_sqc_67_95_varied.yaml
https://patch-diff.githubusercontent.com/SlavovLab/DART-ID#about-the-project
Slavov Laboratoryhttps://web.northeastern.edu/slavovlab/
Northeastern Universityhttps://www.northeastern.edu/
Bioengineeringhttp://www.bioe.neu.edu/
Albert Tian Chenhttps://atchen.me
Alexander Frankshttp://afranks.com/
UCSB Statistics and Applied Probabilityhttps://www.pstat.ucsb.edu/
Nikolai Slavovhttps://web.northeastern.edu/slavovlab/
https://doi.org/10.1371/journal.pcbi.1007082https://doi.org/10.1371/journal.pcbi.1007082
https://www.biorxiv.org/content/10.1101/399121v3https://www.biorxiv.org/content/10.1101/399121v3
https://patch-diff.githubusercontent.com/SlavovLab/DART-ID#license
MIT licensehttps://github.com/SlavovLab/DART-ID/blob/master/LICENSE.txt
https://patch-diff.githubusercontent.com/SlavovLab/DART-ID#contributing
GitHub repositoryhttps://github.com/SlavovLab/DART-ID
https://patch-diff.githubusercontent.com/SlavovLab/DART-ID#data
UCSD's MassIVE Repositoryhttps://massive.ucsd.edu/ProteoSAFe/dataset.jsp?task=ed5a1ab37dc34985bbedbf3d9a945535
https://patch-diff.githubusercontent.com/SlavovLab/DART-ID#figuresanalysis
https://github.com/SlavovLab/DART-ID_2018https://github.com/SlavovLab/DART-ID_2018
dart-id.slavovlab.nethttps://dart-id.slavovlab.net
model https://patch-diff.githubusercontent.com/topics/model
software https://patch-diff.githubusercontent.com/topics/software
alignment https://patch-diff.githubusercontent.com/topics/alignment
proteomics https://patch-diff.githubusercontent.com/topics/proteomics
mass-spectrometry https://patch-diff.githubusercontent.com/topics/mass-spectrometry
bayesian-inference https://patch-diff.githubusercontent.com/topics/bayesian-inference
retention-time https://patch-diff.githubusercontent.com/topics/retention-time
Readme https://patch-diff.githubusercontent.com/SlavovLab/DART-ID#readme-ov-file
MIT license https://patch-diff.githubusercontent.com/SlavovLab/DART-ID#MIT-1-ov-file
Please reload this pagehttps://patch-diff.githubusercontent.com/SlavovLab/DART-ID
Activityhttps://patch-diff.githubusercontent.com/SlavovLab/DART-ID/activity
Custom propertieshttps://patch-diff.githubusercontent.com/SlavovLab/DART-ID/custom-properties
18 starshttps://patch-diff.githubusercontent.com/SlavovLab/DART-ID/stargazers
4 watchinghttps://patch-diff.githubusercontent.com/SlavovLab/DART-ID/watchers
4 forkshttps://patch-diff.githubusercontent.com/SlavovLab/DART-ID/forks
Report repository https://patch-diff.githubusercontent.com/contact/report-content?content_url=https%3A%2F%2Fgithub.com%2FSlavovLab%2FDART-ID&report=SlavovLab+%28user%29
Releases 1https://patch-diff.githubusercontent.com/SlavovLab/DART-ID/releases
DART-ID v2.0.7 Latest May 6, 2019 https://patch-diff.githubusercontent.com/SlavovLab/DART-ID/releases/tag/v2.0.7
Packages 0https://patch-diff.githubusercontent.com/orgs/SlavovLab/packages?repo_name=DART-ID
Please reload this pagehttps://patch-diff.githubusercontent.com/SlavovLab/DART-ID
Contributors 4https://patch-diff.githubusercontent.com/SlavovLab/DART-ID/graphs/contributors
Please reload this pagehttps://patch-diff.githubusercontent.com/SlavovLab/DART-ID
Python 96.0% https://patch-diff.githubusercontent.com/SlavovLab/DART-ID/search?l=python
C 3.7% https://patch-diff.githubusercontent.com/SlavovLab/DART-ID/search?l=c
Shell 0.3% https://patch-diff.githubusercontent.com/SlavovLab/DART-ID/search?l=shell
https://github.com
Termshttps://docs.github.com/site-policy/github-terms/github-terms-of-service
Privacyhttps://docs.github.com/site-policy/privacy-policies/github-privacy-statement
Securityhttps://github.com/security
Statushttps://www.githubstatus.com/
Communityhttps://github.community/
Docshttps://docs.github.com/
Contacthttps://support.github.com?tags=dotcom-footer

Viewport: width=device-width


URLs of crawlers that visited me.