René's URL Explorer Experiment


Title: GitHub - SindiLab/Deep-Learning-in-Spatial-Transcriptomics-Analysis: This repository will host a (continously updated) list of various deep learning methods used in different stages of spatial transcriptomics analysis.

Open Graph Title: GitHub - SindiLab/Deep-Learning-in-Spatial-Transcriptomics-Analysis: This repository will host a (continously updated) list of various deep learning methods used in different stages of spatial transcriptomics analysis.

X Title: GitHub - SindiLab/Deep-Learning-in-Spatial-Transcriptomics-Analysis: This repository will host a (continously updated) list of various deep learning methods used in different stages of spatial transcriptomics analysis.

Description: This repository will host a (continously updated) list of various deep learning methods used in different stages of spatial transcriptomics analysis. - GitHub - SindiLab/Deep-Learning-in-Spatial-Transcriptomics-Analysis: This repository will host a (continously updated) list of various deep learning methods used in different stages of spatial transcriptomics analysis.

Open Graph Description: This repository will host a (continously updated) list of various deep learning methods used in different stages of spatial transcriptomics analysis. - GitHub - SindiLab/Deep-Learning-in-Spatial-T...

X Description: This repository will host a (continously updated) list of various deep learning methods used in different stages of spatial transcriptomics analysis. - GitHub - SindiLab/Deep-Learning-in-Spatial-T...

Opengraph URL: https://github.com/SindiLab/Deep-Learning-in-Spatial-Transcriptomics-Analysis

X: @github

direct link

Domain: patch-diff.githubusercontent.com

route-pattern/:user_id/:repository
route-controllerfiles
route-actiondisambiguate
fetch-noncev2:1e132aeb-44ff-502d-4648-875718155987
current-catalog-service-hashf3abb0cc802f3d7b95fc8762b94bdcb13bf39634c40c357301c4aa1d67a256fb
request-idABE4:18FEBE:28B1B2:3709F3:697717CE
html-safe-nonce61bbaf36664a8d35c5a030fcdba5c842ac4b4a853c9dc868c7cc57867de86508
visitor-payloadeyJyZWZlcnJlciI6IiIsInJlcXVlc3RfaWQiOiJBQkU0OjE4RkVCRToyOEIxQjI6MzcwOUYzOjY5NzcxN0NFIiwidmlzaXRvcl9pZCI6IjE5OTQzMjE3NTczMjk2MjcwODYiLCJyZWdpb25fZWRnZSI6ImlhZCIsInJlZ2lvbl9yZW5kZXIiOiJpYWQifQ==
visitor-hmac13263c60f7a5a6160964503c665dfc09bc3a9f34e5ecbd0a60022a35f914ef9b
hovercard-subject-tagrepository:450672208
github-keyboard-shortcutsrepository,copilot
google-site-verificationApib7-x98H0j5cPqHWwSMm6dNU4GmODRoqxLiDzdx9I
octolytics-urlhttps://collector.github.com/github/collect
analytics-location//
fb:app_id1401488693436528
apple-itunes-appapp-id=1477376905, app-argument=https://github.com/SindiLab/Deep-Learning-in-Spatial-Transcriptomics-Analysis
twitter:imagehttps://opengraph.githubassets.com/02316f54d91138f77bc891d9ff23c2f29f38d5cae3a3a44c3ce0a392e838d057/SindiLab/Deep-Learning-in-Spatial-Transcriptomics-Analysis
twitter:cardsummary_large_image
og:imagehttps://opengraph.githubassets.com/02316f54d91138f77bc891d9ff23c2f29f38d5cae3a3a44c3ce0a392e838d057/SindiLab/Deep-Learning-in-Spatial-Transcriptomics-Analysis
og:image:altThis repository will host a (continously updated) list of various deep learning methods used in different stages of spatial transcriptomics analysis. - GitHub - SindiLab/Deep-Learning-in-Spatial-T...
og:image:width1200
og:image:height600
og:site_nameGitHub
og:typeobject
hostnamegithub.com
expected-hostnamegithub.com
None01d198479908d09a841b2febe8eb105a81af2af7d81830960fe0971e1f4adc09
turbo-cache-controlno-preview
go-importgithub.com/SindiLab/Deep-Learning-in-Spatial-Transcriptomics-Analysis git https://github.com/SindiLab/Deep-Learning-in-Spatial-Transcriptomics-Analysis.git
octolytics-dimension-user_id73210885
octolytics-dimension-user_loginSindiLab
octolytics-dimension-repository_id450672208
octolytics-dimension-repository_nwoSindiLab/Deep-Learning-in-Spatial-Transcriptomics-Analysis
octolytics-dimension-repository_publictrue
octolytics-dimension-repository_is_forkfalse
octolytics-dimension-repository_network_root_id450672208
octolytics-dimension-repository_network_root_nwoSindiLab/Deep-Learning-in-Spatial-Transcriptomics-Analysis
turbo-body-classeslogged-out env-production page-responsive
disable-turbofalse
browser-stats-urlhttps://api.github.com/_private/browser/stats
browser-errors-urlhttps://api.github.com/_private/browser/errors
releasef752335dbbea672610081196a1998e39aec5e14b
ui-targetfull
theme-color#1e2327
color-schemelight dark

Links:

Skip to contenthttps://patch-diff.githubusercontent.com/SindiLab/Deep-Learning-in-Spatial-Transcriptomics-Analysis#start-of-content
https://patch-diff.githubusercontent.com/
Sign in https://patch-diff.githubusercontent.com/login?return_to=https%3A%2F%2Fgithub.com%2FSindiLab%2FDeep-Learning-in-Spatial-Transcriptomics-Analysis
GitHub CopilotWrite better code with AIhttps://github.com/features/copilot
GitHub SparkBuild and deploy intelligent appshttps://github.com/features/spark
GitHub ModelsManage and compare promptshttps://github.com/features/models
MCP RegistryNewIntegrate external toolshttps://github.com/mcp
ActionsAutomate any workflowhttps://github.com/features/actions
CodespacesInstant dev environmentshttps://github.com/features/codespaces
IssuesPlan and track workhttps://github.com/features/issues
Code ReviewManage code changeshttps://github.com/features/code-review
GitHub Advanced SecurityFind and fix vulnerabilitieshttps://github.com/security/advanced-security
Code securitySecure your code as you buildhttps://github.com/security/advanced-security/code-security
Secret protectionStop leaks before they starthttps://github.com/security/advanced-security/secret-protection
Why GitHubhttps://github.com/why-github
Documentationhttps://docs.github.com
Bloghttps://github.blog
Changeloghttps://github.blog/changelog
Marketplacehttps://github.com/marketplace
View all featureshttps://github.com/features
Enterpriseshttps://github.com/enterprise
Small and medium teamshttps://github.com/team
Startupshttps://github.com/enterprise/startups
Nonprofitshttps://github.com/solutions/industry/nonprofits
App Modernizationhttps://github.com/solutions/use-case/app-modernization
DevSecOpshttps://github.com/solutions/use-case/devsecops
DevOpshttps://github.com/solutions/use-case/devops
CI/CDhttps://github.com/solutions/use-case/ci-cd
View all use caseshttps://github.com/solutions/use-case
Healthcarehttps://github.com/solutions/industry/healthcare
Financial serviceshttps://github.com/solutions/industry/financial-services
Manufacturinghttps://github.com/solutions/industry/manufacturing
Governmenthttps://github.com/solutions/industry/government
View all industrieshttps://github.com/solutions/industry
View all solutionshttps://github.com/solutions
AIhttps://github.com/resources/articles?topic=ai
Software Developmenthttps://github.com/resources/articles?topic=software-development
DevOpshttps://github.com/resources/articles?topic=devops
Securityhttps://github.com/resources/articles?topic=security
View all topicshttps://github.com/resources/articles
Customer storieshttps://github.com/customer-stories
Events & webinarshttps://github.com/resources/events
Ebooks & reportshttps://github.com/resources/whitepapers
Business insightshttps://github.com/solutions/executive-insights
GitHub Skillshttps://skills.github.com
Documentationhttps://docs.github.com
Customer supporthttps://support.github.com
Community forumhttps://github.com/orgs/community/discussions
Trust centerhttps://github.com/trust-center
Partnershttps://github.com/partners
GitHub SponsorsFund open source developershttps://github.com/sponsors
Security Labhttps://securitylab.github.com
Maintainer Communityhttps://maintainers.github.com
Acceleratorhttps://github.com/accelerator
Archive Programhttps://archiveprogram.github.com
Topicshttps://github.com/topics
Trendinghttps://github.com/trending
Collectionshttps://github.com/collections
Enterprise platformAI-powered developer platformhttps://github.com/enterprise
GitHub Advanced SecurityEnterprise-grade security featureshttps://github.com/security/advanced-security
Copilot for BusinessEnterprise-grade AI featureshttps://github.com/features/copilot/copilot-business
Premium SupportEnterprise-grade 24/7 supporthttps://github.com/premium-support
Pricinghttps://github.com/pricing
Search syntax tipshttps://docs.github.com/search-github/github-code-search/understanding-github-code-search-syntax
documentationhttps://docs.github.com/search-github/github-code-search/understanding-github-code-search-syntax
Sign in https://patch-diff.githubusercontent.com/login?return_to=https%3A%2F%2Fgithub.com%2FSindiLab%2FDeep-Learning-in-Spatial-Transcriptomics-Analysis
Sign up https://patch-diff.githubusercontent.com/signup?ref_cta=Sign+up&ref_loc=header+logged+out&ref_page=%2F%3Cuser-name%3E%2F%3Crepo-name%3E&source=header-repo&source_repo=SindiLab%2FDeep-Learning-in-Spatial-Transcriptomics-Analysis
Reloadhttps://patch-diff.githubusercontent.com/SindiLab/Deep-Learning-in-Spatial-Transcriptomics-Analysis
Reloadhttps://patch-diff.githubusercontent.com/SindiLab/Deep-Learning-in-Spatial-Transcriptomics-Analysis
Reloadhttps://patch-diff.githubusercontent.com/SindiLab/Deep-Learning-in-Spatial-Transcriptomics-Analysis
SindiLab https://patch-diff.githubusercontent.com/SindiLab
Deep-Learning-in-Spatial-Transcriptomics-Analysishttps://patch-diff.githubusercontent.com/SindiLab/Deep-Learning-in-Spatial-Transcriptomics-Analysis
Notifications https://patch-diff.githubusercontent.com/login?return_to=%2FSindiLab%2FDeep-Learning-in-Spatial-Transcriptomics-Analysis
Fork 4 https://patch-diff.githubusercontent.com/login?return_to=%2FSindiLab%2FDeep-Learning-in-Spatial-Transcriptomics-Analysis
Star 42 https://patch-diff.githubusercontent.com/login?return_to=%2FSindiLab%2FDeep-Learning-in-Spatial-Transcriptomics-Analysis
MIT license https://patch-diff.githubusercontent.com/SindiLab/Deep-Learning-in-Spatial-Transcriptomics-Analysis/blob/main/LICENSE
42 stars https://patch-diff.githubusercontent.com/SindiLab/Deep-Learning-in-Spatial-Transcriptomics-Analysis/stargazers
4 forks https://patch-diff.githubusercontent.com/SindiLab/Deep-Learning-in-Spatial-Transcriptomics-Analysis/forks
Branches https://patch-diff.githubusercontent.com/SindiLab/Deep-Learning-in-Spatial-Transcriptomics-Analysis/branches
Tags https://patch-diff.githubusercontent.com/SindiLab/Deep-Learning-in-Spatial-Transcriptomics-Analysis/tags
Activity https://patch-diff.githubusercontent.com/SindiLab/Deep-Learning-in-Spatial-Transcriptomics-Analysis/activity
Star https://patch-diff.githubusercontent.com/login?return_to=%2FSindiLab%2FDeep-Learning-in-Spatial-Transcriptomics-Analysis
Notifications https://patch-diff.githubusercontent.com/login?return_to=%2FSindiLab%2FDeep-Learning-in-Spatial-Transcriptomics-Analysis
Code https://patch-diff.githubusercontent.com/SindiLab/Deep-Learning-in-Spatial-Transcriptomics-Analysis
Issues 0 https://patch-diff.githubusercontent.com/SindiLab/Deep-Learning-in-Spatial-Transcriptomics-Analysis/issues
Pull requests 2 https://patch-diff.githubusercontent.com/SindiLab/Deep-Learning-in-Spatial-Transcriptomics-Analysis/pulls
Actions https://patch-diff.githubusercontent.com/SindiLab/Deep-Learning-in-Spatial-Transcriptomics-Analysis/actions
Projects 0 https://patch-diff.githubusercontent.com/SindiLab/Deep-Learning-in-Spatial-Transcriptomics-Analysis/projects
Security 0 https://patch-diff.githubusercontent.com/SindiLab/Deep-Learning-in-Spatial-Transcriptomics-Analysis/security
Insights https://patch-diff.githubusercontent.com/SindiLab/Deep-Learning-in-Spatial-Transcriptomics-Analysis/pulse
Code https://patch-diff.githubusercontent.com/SindiLab/Deep-Learning-in-Spatial-Transcriptomics-Analysis
Issues https://patch-diff.githubusercontent.com/SindiLab/Deep-Learning-in-Spatial-Transcriptomics-Analysis/issues
Pull requests https://patch-diff.githubusercontent.com/SindiLab/Deep-Learning-in-Spatial-Transcriptomics-Analysis/pulls
Actions https://patch-diff.githubusercontent.com/SindiLab/Deep-Learning-in-Spatial-Transcriptomics-Analysis/actions
Projects https://patch-diff.githubusercontent.com/SindiLab/Deep-Learning-in-Spatial-Transcriptomics-Analysis/projects
Security https://patch-diff.githubusercontent.com/SindiLab/Deep-Learning-in-Spatial-Transcriptomics-Analysis/security
Insights https://patch-diff.githubusercontent.com/SindiLab/Deep-Learning-in-Spatial-Transcriptomics-Analysis/pulse
Brancheshttps://patch-diff.githubusercontent.com/SindiLab/Deep-Learning-in-Spatial-Transcriptomics-Analysis/branches
Tagshttps://patch-diff.githubusercontent.com/SindiLab/Deep-Learning-in-Spatial-Transcriptomics-Analysis/tags
https://patch-diff.githubusercontent.com/SindiLab/Deep-Learning-in-Spatial-Transcriptomics-Analysis/branches
https://patch-diff.githubusercontent.com/SindiLab/Deep-Learning-in-Spatial-Transcriptomics-Analysis/tags
17 Commitshttps://patch-diff.githubusercontent.com/SindiLab/Deep-Learning-in-Spatial-Transcriptomics-Analysis/commits/main/
https://patch-diff.githubusercontent.com/SindiLab/Deep-Learning-in-Spatial-Transcriptomics-Analysis/commits/main/
.gitignorehttps://patch-diff.githubusercontent.com/SindiLab/Deep-Learning-in-Spatial-Transcriptomics-Analysis/blob/main/.gitignore
.gitignorehttps://patch-diff.githubusercontent.com/SindiLab/Deep-Learning-in-Spatial-Transcriptomics-Analysis/blob/main/.gitignore
ConceptualFigure_forGithub.pnghttps://patch-diff.githubusercontent.com/SindiLab/Deep-Learning-in-Spatial-Transcriptomics-Analysis/blob/main/ConceptualFigure_forGithub.png
ConceptualFigure_forGithub.pnghttps://patch-diff.githubusercontent.com/SindiLab/Deep-Learning-in-Spatial-Transcriptomics-Analysis/blob/main/ConceptualFigure_forGithub.png
LICENSEhttps://patch-diff.githubusercontent.com/SindiLab/Deep-Learning-in-Spatial-Transcriptomics-Analysis/blob/main/LICENSE
LICENSEhttps://patch-diff.githubusercontent.com/SindiLab/Deep-Learning-in-Spatial-Transcriptomics-Analysis/blob/main/LICENSE
README.mdhttps://patch-diff.githubusercontent.com/SindiLab/Deep-Learning-in-Spatial-Transcriptomics-Analysis/blob/main/README.md
README.mdhttps://patch-diff.githubusercontent.com/SindiLab/Deep-Learning-in-Spatial-Transcriptomics-Analysis/blob/main/README.md
READMEhttps://patch-diff.githubusercontent.com/SindiLab/Deep-Learning-in-Spatial-Transcriptomics-Analysis
MIT licensehttps://patch-diff.githubusercontent.com/SindiLab/Deep-Learning-in-Spatial-Transcriptomics-Analysis
https://patch-diff.githubusercontent.com/SindiLab/Deep-Learning-in-Spatial-Transcriptomics-Analysis#deep-learning-in-spatial-transcriptomics-analysis
https://patch-diff.githubusercontent.com/SindiLab/Deep-Learning-in-Spatial-Transcriptomics-Analysis/blob/main/ConceptualFigure_forGithub.png
https://patch-diff.githubusercontent.com/SindiLab/Deep-Learning-in-Spatial-Transcriptomics-Analysis#review-papers
herehttps://doi.org/10.1063/5.0091135
this linkhttps://www.biorxiv.org/content/10.1101/2021.11.26.470166v2
https://patch-diff.githubusercontent.com/SindiLab/Deep-Learning-in-Spatial-Transcriptomics-Analysis#methods
https://patch-diff.githubusercontent.com/SindiLab/Deep-Learning-in-Spatial-Transcriptomics-Analysis#deep-learning-approaches
HematoFatePredictionhttps://github.com/marrlab/HematoFatePrediction
DEEPschttps://github.com/fmaseda/DEEPsc
DestVIhttps://github.com/romain-lopez/DestVI-reproducibility
https://doi.org/10.1038/s41587-022-01272-8https://doi.org/10.1038/s41587-022-01272-8
DSTGhttps://github.com/Su-informatics-lab/DSTG
https://doi.org/10.1038/s41587-022-01272-8https://doi.org/10.1038/s41587-022-01272-8
Tangramhttps://github.com/broadinstitute/Tangram
https://doi.org/10.1038/s41592-021-01264-7https://doi.org/10.1038/s41592-021-01264-7
ST-Nethttps://github.com/bryanhe/ST-Net
spaCellhttps://github.com/BiomedicalMachineLearning/SpaCell
stLearnhttps://github.com/BiomedicalMachineLearning/stLearn
spaGCNhttps://github.com/jianhuupenn/SpaGCN
GLUERhttps://github.com/software-github/GLUER
https://doi.org/10.1101/2021.01.25.427845https://doi.org/10.1101/2021.01.25.427845
https://patch-diff.githubusercontent.com/SindiLab/Deep-Learning-in-Spatial-Transcriptomics-Analysis#machine-learningstatistical-approaches
Seurathttps://github.com/satijalab/seurat
novoSpaRchttps://github.com/rajewsky-lab/novosparc
Steroscopehttps://github.com/almaan/stereoscope
SPOTlighthttps://github.com/MarcElosua/SPOTlight
RTCDhttps://github.com/dmcable/RCTD
SpatialDWLShttps://github.com/RubD/Giotto
Cell2Locationhttps://github.com/BayraktarLab/cell2location
CARDhttps://github.com/YingMa0107/CARD
Trendsceekhttps://github.com/edsgard/trendsceek
SpatialDEhttps://github.com/Teichlab/SpatialDE
Sparkhttps://github.com/xzhoulab/SPARK
HMRFhttps://bitbucket.org/qzhudfci/smfishhmrf-py/
BayesSpacehttps://github.com/edward130603/BayesSpace
SpaOTschttps://github.com/zcang/SpaOTsc
MISTyhttps://github.com/saezlab/mistyR
Giottohttps://github.com/RubD/Giotto
https://patch-diff.githubusercontent.com/SindiLab/Deep-Learning-in-Spatial-Transcriptomics-Analysis#updatesto-do
https://patch-diff.githubusercontent.com/SindiLab/Deep-Learning-in-Spatial-Transcriptomics-Analysis#citation-and-acknowledgement
Readme https://patch-diff.githubusercontent.com/SindiLab/Deep-Learning-in-Spatial-Transcriptomics-Analysis#readme-ov-file
MIT license https://patch-diff.githubusercontent.com/SindiLab/Deep-Learning-in-Spatial-Transcriptomics-Analysis#MIT-1-ov-file
Please reload this pagehttps://patch-diff.githubusercontent.com/SindiLab/Deep-Learning-in-Spatial-Transcriptomics-Analysis
Activityhttps://patch-diff.githubusercontent.com/SindiLab/Deep-Learning-in-Spatial-Transcriptomics-Analysis/activity
Custom propertieshttps://patch-diff.githubusercontent.com/SindiLab/Deep-Learning-in-Spatial-Transcriptomics-Analysis/custom-properties
42 starshttps://patch-diff.githubusercontent.com/SindiLab/Deep-Learning-in-Spatial-Transcriptomics-Analysis/stargazers
2 watchinghttps://patch-diff.githubusercontent.com/SindiLab/Deep-Learning-in-Spatial-Transcriptomics-Analysis/watchers
4 forkshttps://patch-diff.githubusercontent.com/SindiLab/Deep-Learning-in-Spatial-Transcriptomics-Analysis/forks
Report repository https://patch-diff.githubusercontent.com/contact/report-content?content_url=https%3A%2F%2Fgithub.com%2FSindiLab%2FDeep-Learning-in-Spatial-Transcriptomics-Analysis&report=SindiLab+%28user%29
Releaseshttps://patch-diff.githubusercontent.com/SindiLab/Deep-Learning-in-Spatial-Transcriptomics-Analysis/releases
Packages 0https://patch-diff.githubusercontent.com/orgs/SindiLab/packages?repo_name=Deep-Learning-in-Spatial-Transcriptomics-Analysis
https://github.com
Termshttps://docs.github.com/site-policy/github-terms/github-terms-of-service
Privacyhttps://docs.github.com/site-policy/privacy-policies/github-privacy-statement
Securityhttps://github.com/security
Statushttps://www.githubstatus.com/
Communityhttps://github.community/
Docshttps://docs.github.com/
Contacthttps://support.github.com?tags=dotcom-footer

Viewport: width=device-width

URLs of crawlers that visited me.