René's URL Explorer Experiment


Title: GitHub - RosettaCommons/RFDpoly: A diffusion-based ML model for de novo design of DNA, RNA, proteins, and mixed assemblies.

Open Graph Title: GitHub - RosettaCommons/RFDpoly: A diffusion-based ML model for de novo design of DNA, RNA, proteins, and mixed assemblies.

X Title: GitHub - RosettaCommons/RFDpoly: A diffusion-based ML model for de novo design of DNA, RNA, proteins, and mixed assemblies.

Description: A diffusion-based ML model for de novo design of DNA, RNA, proteins, and mixed assemblies. - RosettaCommons/RFDpoly

Open Graph Description: A diffusion-based ML model for de novo design of DNA, RNA, proteins, and mixed assemblies. - RosettaCommons/RFDpoly

X Description: A diffusion-based ML model for de novo design of DNA, RNA, proteins, and mixed assemblies. - RosettaCommons/RFDpoly

Mail addresses
afavor@uw.edu

Opengraph URL: https://github.com/RosettaCommons/RFDpoly

X: @github

direct link

Domain: patch-diff.githubusercontent.com

route-pattern/:user_id/:repository
route-controllerfiles
route-actiondisambiguate
fetch-noncev2:9adca703-d0d7-07fa-409a-2187991af1f0
current-catalog-service-hashf3abb0cc802f3d7b95fc8762b94bdcb13bf39634c40c357301c4aa1d67a256fb
request-idE3F4:235B21:43347EB:586ACB0:6992E052
html-safe-nonce27e9884d5d6f6555bd3dd81e720186ef7fe7c56504c3bdb1b8db05a8ae397e32
visitor-payloadeyJyZWZlcnJlciI6IiIsInJlcXVlc3RfaWQiOiJFM0Y0OjIzNUIyMTo0MzM0N0VCOjU4NkFDQjA6Njk5MkUwNTIiLCJ2aXNpdG9yX2lkIjoiMzMwNjk5OTI1NjMyMjMzNDgwMiIsInJlZ2lvbl9lZGdlIjoiaWFkIiwicmVnaW9uX3JlbmRlciI6ImlhZCJ9
visitor-hmac800ab2ae0dbe949ad9d5e93a6e92f13e5ead6b28eca9cda510bfb5fee5baaec5
hovercard-subject-tagrepository:927315706
github-keyboard-shortcutsrepository,copilot
google-site-verificationApib7-x98H0j5cPqHWwSMm6dNU4GmODRoqxLiDzdx9I
octolytics-urlhttps://collector.github.com/github/collect
analytics-location//
fb:app_id1401488693436528
apple-itunes-appapp-id=1477376905, app-argument=https://github.com/RosettaCommons/RFDpoly
twitter:imagehttps://opengraph.githubassets.com/914eb343c92f9a38487c3fff958ff41cdf712db6157499c736023a7ea7d1028d/RosettaCommons/RFDpoly
twitter:cardsummary_large_image
og:imagehttps://opengraph.githubassets.com/914eb343c92f9a38487c3fff958ff41cdf712db6157499c736023a7ea7d1028d/RosettaCommons/RFDpoly
og:image:altA diffusion-based ML model for de novo design of DNA, RNA, proteins, and mixed assemblies. - RosettaCommons/RFDpoly
og:image:width1200
og:image:height600
og:site_nameGitHub
og:typeobject
hostnamegithub.com
expected-hostnamegithub.com
None42c603b9d642c4a9065a51770f75e5e27132fef0e858607f5c9cb7e422831a7b
turbo-cache-controlno-preview
go-importgithub.com/RosettaCommons/RFDpoly git https://github.com/RosettaCommons/RFDpoly.git
octolytics-dimension-user_id3856847
octolytics-dimension-user_loginRosettaCommons
octolytics-dimension-repository_id927315706
octolytics-dimension-repository_nwoRosettaCommons/RFDpoly
octolytics-dimension-repository_publictrue
octolytics-dimension-repository_is_forkfalse
octolytics-dimension-repository_network_root_id927315706
octolytics-dimension-repository_network_root_nwoRosettaCommons/RFDpoly
turbo-body-classeslogged-out env-production page-responsive
disable-turbofalse
browser-stats-urlhttps://api.github.com/_private/browser/stats
browser-errors-urlhttps://api.github.com/_private/browser/errors
release84dcb133269e3cfe6e0296cc85fbacb92cae92bb
ui-targetfull
theme-color#1e2327
color-schemelight dark

Links:

Skip to contenthttps://patch-diff.githubusercontent.com/RosettaCommons/RFDpoly#start-of-content
https://patch-diff.githubusercontent.com/
Sign in https://patch-diff.githubusercontent.com/login?return_to=https%3A%2F%2Fgithub.com%2FRosettaCommons%2FRFDpoly
GitHub CopilotWrite better code with AIhttps://github.com/features/copilot
GitHub SparkBuild and deploy intelligent appshttps://github.com/features/spark
GitHub ModelsManage and compare promptshttps://github.com/features/models
MCP RegistryNewIntegrate external toolshttps://github.com/mcp
ActionsAutomate any workflowhttps://github.com/features/actions
CodespacesInstant dev environmentshttps://github.com/features/codespaces
IssuesPlan and track workhttps://github.com/features/issues
Code ReviewManage code changeshttps://github.com/features/code-review
GitHub Advanced SecurityFind and fix vulnerabilitieshttps://github.com/security/advanced-security
Code securitySecure your code as you buildhttps://github.com/security/advanced-security/code-security
Secret protectionStop leaks before they starthttps://github.com/security/advanced-security/secret-protection
Why GitHubhttps://github.com/why-github
Documentationhttps://docs.github.com
Bloghttps://github.blog
Changeloghttps://github.blog/changelog
Marketplacehttps://github.com/marketplace
View all featureshttps://github.com/features
Enterpriseshttps://github.com/enterprise
Small and medium teamshttps://github.com/team
Startupshttps://github.com/enterprise/startups
Nonprofitshttps://github.com/solutions/industry/nonprofits
App Modernizationhttps://github.com/solutions/use-case/app-modernization
DevSecOpshttps://github.com/solutions/use-case/devsecops
DevOpshttps://github.com/solutions/use-case/devops
CI/CDhttps://github.com/solutions/use-case/ci-cd
View all use caseshttps://github.com/solutions/use-case
Healthcarehttps://github.com/solutions/industry/healthcare
Financial serviceshttps://github.com/solutions/industry/financial-services
Manufacturinghttps://github.com/solutions/industry/manufacturing
Governmenthttps://github.com/solutions/industry/government
View all industrieshttps://github.com/solutions/industry
View all solutionshttps://github.com/solutions
AIhttps://github.com/resources/articles?topic=ai
Software Developmenthttps://github.com/resources/articles?topic=software-development
DevOpshttps://github.com/resources/articles?topic=devops
Securityhttps://github.com/resources/articles?topic=security
View all topicshttps://github.com/resources/articles
Customer storieshttps://github.com/customer-stories
Events & webinarshttps://github.com/resources/events
Ebooks & reportshttps://github.com/resources/whitepapers
Business insightshttps://github.com/solutions/executive-insights
GitHub Skillshttps://skills.github.com
Documentationhttps://docs.github.com
Customer supporthttps://support.github.com
Community forumhttps://github.com/orgs/community/discussions
Trust centerhttps://github.com/trust-center
Partnershttps://github.com/partners
GitHub SponsorsFund open source developershttps://github.com/sponsors
Security Labhttps://securitylab.github.com
Maintainer Communityhttps://maintainers.github.com
Acceleratorhttps://github.com/accelerator
Archive Programhttps://archiveprogram.github.com
Topicshttps://github.com/topics
Trendinghttps://github.com/trending
Collectionshttps://github.com/collections
Enterprise platformAI-powered developer platformhttps://github.com/enterprise
GitHub Advanced SecurityEnterprise-grade security featureshttps://github.com/security/advanced-security
Copilot for BusinessEnterprise-grade AI featureshttps://github.com/features/copilot/copilot-business
Premium SupportEnterprise-grade 24/7 supporthttps://github.com/premium-support
Pricinghttps://github.com/pricing
Search syntax tipshttps://docs.github.com/search-github/github-code-search/understanding-github-code-search-syntax
documentationhttps://docs.github.com/search-github/github-code-search/understanding-github-code-search-syntax
Sign in https://patch-diff.githubusercontent.com/login?return_to=https%3A%2F%2Fgithub.com%2FRosettaCommons%2FRFDpoly
Sign up https://patch-diff.githubusercontent.com/signup?ref_cta=Sign+up&ref_loc=header+logged+out&ref_page=%2F%3Cuser-name%3E%2F%3Crepo-name%3E&source=header-repo&source_repo=RosettaCommons%2FRFDpoly
Reloadhttps://patch-diff.githubusercontent.com/RosettaCommons/RFDpoly
Reloadhttps://patch-diff.githubusercontent.com/RosettaCommons/RFDpoly
Reloadhttps://patch-diff.githubusercontent.com/RosettaCommons/RFDpoly
RosettaCommons https://patch-diff.githubusercontent.com/RosettaCommons
RFDpolyhttps://patch-diff.githubusercontent.com/RosettaCommons/RFDpoly
Notifications https://patch-diff.githubusercontent.com/login?return_to=%2FRosettaCommons%2FRFDpoly
Fork 4 https://patch-diff.githubusercontent.com/login?return_to=%2FRosettaCommons%2FRFDpoly
Star 18 https://patch-diff.githubusercontent.com/login?return_to=%2FRosettaCommons%2FRFDpoly
rosettacommons.github.io/RFDpoly/https://rosettacommons.github.io/RFDpoly/
View license https://patch-diff.githubusercontent.com/RosettaCommons/RFDpoly/blob/main/LICENSE.md
18 stars https://patch-diff.githubusercontent.com/RosettaCommons/RFDpoly/stargazers
4 forks https://patch-diff.githubusercontent.com/RosettaCommons/RFDpoly/forks
Branches https://patch-diff.githubusercontent.com/RosettaCommons/RFDpoly/branches
Tags https://patch-diff.githubusercontent.com/RosettaCommons/RFDpoly/tags
Activity https://patch-diff.githubusercontent.com/RosettaCommons/RFDpoly/activity
Star https://patch-diff.githubusercontent.com/login?return_to=%2FRosettaCommons%2FRFDpoly
Notifications https://patch-diff.githubusercontent.com/login?return_to=%2FRosettaCommons%2FRFDpoly
Code https://patch-diff.githubusercontent.com/RosettaCommons/RFDpoly
Issues 0 https://patch-diff.githubusercontent.com/RosettaCommons/RFDpoly/issues
Pull requests 0 https://patch-diff.githubusercontent.com/RosettaCommons/RFDpoly/pulls
Discussions https://patch-diff.githubusercontent.com/RosettaCommons/RFDpoly/discussions
Actions https://patch-diff.githubusercontent.com/RosettaCommons/RFDpoly/actions
Projects 0 https://patch-diff.githubusercontent.com/RosettaCommons/RFDpoly/projects
Security 0 https://patch-diff.githubusercontent.com/RosettaCommons/RFDpoly/security
Insights https://patch-diff.githubusercontent.com/RosettaCommons/RFDpoly/pulse
Code https://patch-diff.githubusercontent.com/RosettaCommons/RFDpoly
Issues https://patch-diff.githubusercontent.com/RosettaCommons/RFDpoly/issues
Pull requests https://patch-diff.githubusercontent.com/RosettaCommons/RFDpoly/pulls
Discussions https://patch-diff.githubusercontent.com/RosettaCommons/RFDpoly/discussions
Actions https://patch-diff.githubusercontent.com/RosettaCommons/RFDpoly/actions
Projects https://patch-diff.githubusercontent.com/RosettaCommons/RFDpoly/projects
Security https://patch-diff.githubusercontent.com/RosettaCommons/RFDpoly/security
Insights https://patch-diff.githubusercontent.com/RosettaCommons/RFDpoly/pulse
Brancheshttps://patch-diff.githubusercontent.com/RosettaCommons/RFDpoly/branches
Tagshttps://patch-diff.githubusercontent.com/RosettaCommons/RFDpoly/tags
https://patch-diff.githubusercontent.com/RosettaCommons/RFDpoly/branches
https://patch-diff.githubusercontent.com/RosettaCommons/RFDpoly/tags
441 Commitshttps://patch-diff.githubusercontent.com/RosettaCommons/RFDpoly/commits/main/
https://patch-diff.githubusercontent.com/RosettaCommons/RFDpoly/commits/main/
.github/workflowshttps://patch-diff.githubusercontent.com/RosettaCommons/RFDpoly/tree/main/.github/workflows
.github/workflowshttps://patch-diff.githubusercontent.com/RosettaCommons/RFDpoly/tree/main/.github/workflows
docshttps://patch-diff.githubusercontent.com/RosettaCommons/RFDpoly/tree/main/docs
docshttps://patch-diff.githubusercontent.com/RosettaCommons/RFDpoly/tree/main/docs
rf_diffusionhttps://patch-diff.githubusercontent.com/RosettaCommons/RFDpoly/tree/main/rf_diffusion
rf_diffusionhttps://patch-diff.githubusercontent.com/RosettaCommons/RFDpoly/tree/main/rf_diffusion
testhttps://patch-diff.githubusercontent.com/RosettaCommons/RFDpoly/tree/main/test
testhttps://patch-diff.githubusercontent.com/RosettaCommons/RFDpoly/tree/main/test
.gitmoduleshttps://patch-diff.githubusercontent.com/RosettaCommons/RFDpoly/blob/main/.gitmodules
.gitmoduleshttps://patch-diff.githubusercontent.com/RosettaCommons/RFDpoly/blob/main/.gitmodules
CONTRIBUTING.mdhttps://patch-diff.githubusercontent.com/RosettaCommons/RFDpoly/blob/main/CONTRIBUTING.md
CONTRIBUTING.mdhttps://patch-diff.githubusercontent.com/RosettaCommons/RFDpoly/blob/main/CONTRIBUTING.md
LICENSE.mdhttps://patch-diff.githubusercontent.com/RosettaCommons/RFDpoly/blob/main/LICENSE.md
LICENSE.mdhttps://patch-diff.githubusercontent.com/RosettaCommons/RFDpoly/blob/main/LICENSE.md
README.mdhttps://patch-diff.githubusercontent.com/RosettaCommons/RFDpoly/blob/main/README.md
README.mdhttps://patch-diff.githubusercontent.com/RosettaCommons/RFDpoly/blob/main/README.md
RFDpoly_tutorial.pdfhttps://patch-diff.githubusercontent.com/RosettaCommons/RFDpoly/blob/main/RFDpoly_tutorial.pdf
RFDpoly_tutorial.pdfhttps://patch-diff.githubusercontent.com/RosettaCommons/RFDpoly/blob/main/RFDpoly_tutorial.pdf
setup.pyhttps://patch-diff.githubusercontent.com/RosettaCommons/RFDpoly/blob/main/setup.py
setup.pyhttps://patch-diff.githubusercontent.com/RosettaCommons/RFDpoly/blob/main/setup.py
READMEhttps://patch-diff.githubusercontent.com/RosettaCommons/RFDpoly
Contributinghttps://patch-diff.githubusercontent.com/RosettaCommons/RFDpoly
Licensehttps://patch-diff.githubusercontent.com/RosettaCommons/RFDpoly
https://patch-diff.githubusercontent.com/RosettaCommons/RFDpoly#multi-polymer-diffusion
https://patch-diff.githubusercontent.com/RosettaCommons/RFDpoly#basic-info
associated preprinthttps://www.biorxiv.org/content/10.1101/2025.10.01.679929v1
https://patch-diff.githubusercontent.com/RosettaCommons/RFDpoly#documentation
herehttps://rosettacommons.github.io/RFDpoly/
https://patch-diff.githubusercontent.com/RosettaCommons/RFDpoly#installation-and-setup
https://patch-diff.githubusercontent.com/RosettaCommons/RFDpoly#1-clone-the-repository
https://patch-diff.githubusercontent.com/RosettaCommons/RFDpoly#2-set-environment-variables-and-create-directories
https://patch-diff.githubusercontent.com/RosettaCommons/RFDpoly#3-navigate-to-the-directory-where-you-want-to-save-model-weights-download-them-and-set-path-variable-for-weights-of-your-choice
https://patch-diff.githubusercontent.com/RosettaCommons/RFDpoly#4-setting-up-the-environment
Apptainerhttps://apptainer.org/
external documentationhttps://rosettacommons.github.io/RFDpoly/
https://patch-diff.githubusercontent.com/RosettaCommons/RFDpoly#basic-use-case-example-testing-your-setup
design tutorialhttps://github.com/RosettaCommons/RFDpoly/blob/main/RFDpoly_tutorial.pdf
https://patch-diff.githubusercontent.com/RosettaCommons/RFDpoly#if-the-example-demo-command-above-works-proceed-to-exploration-of-the-full-design-tutorial
https://patch-diff.githubusercontent.com/RosettaCommons/RFDpoly#additional-software-policy-checklist-items
https://patch-diff.githubusercontent.com/RosettaCommons/RFDpoly#system-requirements
Apptainerhttps://apptainer.org/
https://patch-diff.githubusercontent.com/RosettaCommons/RFDpoly#times-to-install-provided-files-and-run-inference-tested-on-linux-operating-system-ubuntu-24042
https://patch-diff.githubusercontent.com/RosettaCommons/RFDpoly#testing
rosettacommons.github.io/RFDpoly/https://rosettacommons.github.io/RFDpoly/
Readme https://patch-diff.githubusercontent.com/RosettaCommons/RFDpoly#readme-ov-file
View license https://patch-diff.githubusercontent.com/RosettaCommons/RFDpoly#License-1-ov-file
Contributing https://patch-diff.githubusercontent.com/RosettaCommons/RFDpoly#contributing-ov-file
Please reload this pagehttps://patch-diff.githubusercontent.com/RosettaCommons/RFDpoly
Activityhttps://patch-diff.githubusercontent.com/RosettaCommons/RFDpoly/activity
Custom propertieshttps://patch-diff.githubusercontent.com/RosettaCommons/RFDpoly/custom-properties
18 starshttps://patch-diff.githubusercontent.com/RosettaCommons/RFDpoly/stargazers
3 watchinghttps://patch-diff.githubusercontent.com/RosettaCommons/RFDpoly/watchers
4 forkshttps://patch-diff.githubusercontent.com/RosettaCommons/RFDpoly/forks
Report repository https://patch-diff.githubusercontent.com/contact/report-content?content_url=https%3A%2F%2Fgithub.com%2FRosettaCommons%2FRFDpoly&report=RosettaCommons+%28user%29
Releaseshttps://patch-diff.githubusercontent.com/RosettaCommons/RFDpoly/releases
Packages 0https://patch-diff.githubusercontent.com/orgs/RosettaCommons/packages?repo_name=RFDpoly
Please reload this pagehttps://patch-diff.githubusercontent.com/RosettaCommons/RFDpoly
Contributors 3https://patch-diff.githubusercontent.com/RosettaCommons/RFDpoly/graphs/contributors
Please reload this pagehttps://patch-diff.githubusercontent.com/RosettaCommons/RFDpoly
Python 88.7% https://patch-diff.githubusercontent.com/RosettaCommons/RFDpoly/search?l=python
Jupyter Notebook 10.9% https://patch-diff.githubusercontent.com/RosettaCommons/RFDpoly/search?l=jupyter-notebook
https://github.com
Termshttps://docs.github.com/site-policy/github-terms/github-terms-of-service
Privacyhttps://docs.github.com/site-policy/privacy-policies/github-privacy-statement
Securityhttps://github.com/security
Statushttps://www.githubstatus.com/
Communityhttps://github.community/
Docshttps://docs.github.com/
Contacthttps://support.github.com?tags=dotcom-footer

Viewport: width=device-width


URLs of crawlers that visited me.