René's URL Explorer Experiment


Title: GitHub - ModelDBRepository/243508: Disentangling astroglial physiology with a realistic cell model in silico (Savtchenko et al 2018)

Open Graph Title: GitHub - ModelDBRepository/243508: Disentangling astroglial physiology with a realistic cell model in silico (Savtchenko et al 2018)

X Title: GitHub - ModelDBRepository/243508: Disentangling astroglial physiology with a realistic cell model in silico (Savtchenko et al 2018)

Description: Disentangling astroglial physiology with a realistic cell model in silico (Savtchenko et al 2018) - ModelDBRepository/243508

Open Graph Description: Disentangling astroglial physiology with a realistic cell model in silico (Savtchenko et al 2018) - ModelDBRepository/243508

X Description: Disentangling astroglial physiology with a realistic cell model in silico (Savtchenko et al 2018) - ModelDBRepository/243508

Mail addresses
savtchenko#yahoo.com

Opengraph URL: https://github.com/ModelDBRepository/243508

X: @github

direct link

Domain: patch-diff.githubusercontent.com

route-pattern/:user_id/:repository
route-controllerfiles
route-actiondisambiguate
fetch-noncev2:a5aa5e34-d74c-648d-1004-695417269247
current-catalog-service-hashf3abb0cc802f3d7b95fc8762b94bdcb13bf39634c40c357301c4aa1d67a256fb
request-idA84C:3D8A6E:B12FB43:EC18595:698C4E4C
html-safe-nonce086812a1c5260791ec7efc25ddd3240abff92c2149e01928786276a6ad51ff49
visitor-payloadeyJyZWZlcnJlciI6IiIsInJlcXVlc3RfaWQiOiJBODRDOjNEOEE2RTpCMTJGQjQzOkVDMTg1OTU6Njk4QzRFNEMiLCJ2aXNpdG9yX2lkIjoiNDE1MDQ0MjM2OTgxNDkwODQ5MiIsInJlZ2lvbl9lZGdlIjoiaWFkIiwicmVnaW9uX3JlbmRlciI6ImlhZCJ9
visitor-hmac9d4ca833e471564907a9b4431730962cd62afdef27d2c867fc52140c5a3ff7ba
hovercard-subject-tagrepository:189301083
github-keyboard-shortcutsrepository,copilot
google-site-verificationApib7-x98H0j5cPqHWwSMm6dNU4GmODRoqxLiDzdx9I
octolytics-urlhttps://collector.github.com/github/collect
analytics-location//
fb:app_id1401488693436528
apple-itunes-appapp-id=1477376905, app-argument=https://github.com/ModelDBRepository/243508
twitter:imagehttps://opengraph.githubassets.com/b450e170d04a52385b706ce3fa23b1306e874a8e51ef4414753445cd4db919f5/ModelDBRepository/243508
twitter:cardsummary_large_image
og:imagehttps://opengraph.githubassets.com/b450e170d04a52385b706ce3fa23b1306e874a8e51ef4414753445cd4db919f5/ModelDBRepository/243508
og:image:altDisentangling astroglial physiology with a realistic cell model in silico (Savtchenko et al 2018) - ModelDBRepository/243508
og:image:width1200
og:image:height600
og:site_nameGitHub
og:typeobject
hostnamegithub.com
expected-hostnamegithub.com
None640eeb7b6ff4d8d106235d228c0c286e82592d4d2403227b5b2b4fc5832297a4
turbo-cache-controlno-preview
go-importgithub.com/ModelDBRepository/243508 git https://github.com/ModelDBRepository/243508.git
octolytics-dimension-user_id38667483
octolytics-dimension-user_loginModelDBRepository
octolytics-dimension-repository_id189301083
octolytics-dimension-repository_nwoModelDBRepository/243508
octolytics-dimension-repository_publictrue
octolytics-dimension-repository_is_forkfalse
octolytics-dimension-repository_network_root_id189301083
octolytics-dimension-repository_network_root_nwoModelDBRepository/243508
turbo-body-classeslogged-out env-production page-responsive
disable-turbofalse
browser-stats-urlhttps://api.github.com/_private/browser/stats
browser-errors-urlhttps://api.github.com/_private/browser/errors
release3d444f0a47beeeac94cddbb51c91ab408befe8d4
ui-targetfull
theme-color#1e2327
color-schemelight dark

Links:

Skip to contenthttps://patch-diff.githubusercontent.com/ModelDBRepository/243508#start-of-content
https://patch-diff.githubusercontent.com/
Sign in https://patch-diff.githubusercontent.com/login?return_to=https%3A%2F%2Fgithub.com%2FModelDBRepository%2F243508
GitHub CopilotWrite better code with AIhttps://github.com/features/copilot
GitHub SparkBuild and deploy intelligent appshttps://github.com/features/spark
GitHub ModelsManage and compare promptshttps://github.com/features/models
MCP RegistryNewIntegrate external toolshttps://github.com/mcp
ActionsAutomate any workflowhttps://github.com/features/actions
CodespacesInstant dev environmentshttps://github.com/features/codespaces
IssuesPlan and track workhttps://github.com/features/issues
Code ReviewManage code changeshttps://github.com/features/code-review
GitHub Advanced SecurityFind and fix vulnerabilitieshttps://github.com/security/advanced-security
Code securitySecure your code as you buildhttps://github.com/security/advanced-security/code-security
Secret protectionStop leaks before they starthttps://github.com/security/advanced-security/secret-protection
Why GitHubhttps://github.com/why-github
Documentationhttps://docs.github.com
Bloghttps://github.blog
Changeloghttps://github.blog/changelog
Marketplacehttps://github.com/marketplace
View all featureshttps://github.com/features
Enterpriseshttps://github.com/enterprise
Small and medium teamshttps://github.com/team
Startupshttps://github.com/enterprise/startups
Nonprofitshttps://github.com/solutions/industry/nonprofits
App Modernizationhttps://github.com/solutions/use-case/app-modernization
DevSecOpshttps://github.com/solutions/use-case/devsecops
DevOpshttps://github.com/solutions/use-case/devops
CI/CDhttps://github.com/solutions/use-case/ci-cd
View all use caseshttps://github.com/solutions/use-case
Healthcarehttps://github.com/solutions/industry/healthcare
Financial serviceshttps://github.com/solutions/industry/financial-services
Manufacturinghttps://github.com/solutions/industry/manufacturing
Governmenthttps://github.com/solutions/industry/government
View all industrieshttps://github.com/solutions/industry
View all solutionshttps://github.com/solutions
AIhttps://github.com/resources/articles?topic=ai
Software Developmenthttps://github.com/resources/articles?topic=software-development
DevOpshttps://github.com/resources/articles?topic=devops
Securityhttps://github.com/resources/articles?topic=security
View all topicshttps://github.com/resources/articles
Customer storieshttps://github.com/customer-stories
Events & webinarshttps://github.com/resources/events
Ebooks & reportshttps://github.com/resources/whitepapers
Business insightshttps://github.com/solutions/executive-insights
GitHub Skillshttps://skills.github.com
Documentationhttps://docs.github.com
Customer supporthttps://support.github.com
Community forumhttps://github.com/orgs/community/discussions
Trust centerhttps://github.com/trust-center
Partnershttps://github.com/partners
GitHub SponsorsFund open source developershttps://github.com/sponsors
Security Labhttps://securitylab.github.com
Maintainer Communityhttps://maintainers.github.com
Acceleratorhttps://github.com/accelerator
Archive Programhttps://archiveprogram.github.com
Topicshttps://github.com/topics
Trendinghttps://github.com/trending
Collectionshttps://github.com/collections
Enterprise platformAI-powered developer platformhttps://github.com/enterprise
GitHub Advanced SecurityEnterprise-grade security featureshttps://github.com/security/advanced-security
Copilot for BusinessEnterprise-grade AI featureshttps://github.com/features/copilot/copilot-business
Premium SupportEnterprise-grade 24/7 supporthttps://github.com/premium-support
Pricinghttps://github.com/pricing
Search syntax tipshttps://docs.github.com/search-github/github-code-search/understanding-github-code-search-syntax
documentationhttps://docs.github.com/search-github/github-code-search/understanding-github-code-search-syntax
Sign in https://patch-diff.githubusercontent.com/login?return_to=https%3A%2F%2Fgithub.com%2FModelDBRepository%2F243508
Sign up https://patch-diff.githubusercontent.com/signup?ref_cta=Sign+up&ref_loc=header+logged+out&ref_page=%2F%3Cuser-name%3E%2F%3Crepo-name%3E&source=header-repo&source_repo=ModelDBRepository%2F243508
Reloadhttps://patch-diff.githubusercontent.com/ModelDBRepository/243508
Reloadhttps://patch-diff.githubusercontent.com/ModelDBRepository/243508
Reloadhttps://patch-diff.githubusercontent.com/ModelDBRepository/243508
ModelDBRepository https://patch-diff.githubusercontent.com/ModelDBRepository
243508https://patch-diff.githubusercontent.com/ModelDBRepository/243508
Notifications https://patch-diff.githubusercontent.com/login?return_to=%2FModelDBRepository%2F243508
Fork 1 https://patch-diff.githubusercontent.com/login?return_to=%2FModelDBRepository%2F243508
Star 0 https://patch-diff.githubusercontent.com/login?return_to=%2FModelDBRepository%2F243508
modeldb.science/243508https://modeldb.science/243508
0 stars https://patch-diff.githubusercontent.com/ModelDBRepository/243508/stargazers
1 fork https://patch-diff.githubusercontent.com/ModelDBRepository/243508/forks
Branches https://patch-diff.githubusercontent.com/ModelDBRepository/243508/branches
Tags https://patch-diff.githubusercontent.com/ModelDBRepository/243508/tags
Activity https://patch-diff.githubusercontent.com/ModelDBRepository/243508/activity
Star https://patch-diff.githubusercontent.com/login?return_to=%2FModelDBRepository%2F243508
Notifications https://patch-diff.githubusercontent.com/login?return_to=%2FModelDBRepository%2F243508
Code https://patch-diff.githubusercontent.com/ModelDBRepository/243508
Issues 0 https://patch-diff.githubusercontent.com/ModelDBRepository/243508/issues
Pull requests 0 https://patch-diff.githubusercontent.com/ModelDBRepository/243508/pulls
Actions https://patch-diff.githubusercontent.com/ModelDBRepository/243508/actions
Projects 0 https://patch-diff.githubusercontent.com/ModelDBRepository/243508/projects
Security 0 https://patch-diff.githubusercontent.com/ModelDBRepository/243508/security
Insights https://patch-diff.githubusercontent.com/ModelDBRepository/243508/pulse
Code https://patch-diff.githubusercontent.com/ModelDBRepository/243508
Issues https://patch-diff.githubusercontent.com/ModelDBRepository/243508/issues
Pull requests https://patch-diff.githubusercontent.com/ModelDBRepository/243508/pulls
Actions https://patch-diff.githubusercontent.com/ModelDBRepository/243508/actions
Projects https://patch-diff.githubusercontent.com/ModelDBRepository/243508/projects
Security https://patch-diff.githubusercontent.com/ModelDBRepository/243508/security
Insights https://patch-diff.githubusercontent.com/ModelDBRepository/243508/pulse
Brancheshttps://patch-diff.githubusercontent.com/ModelDBRepository/243508/branches
Tagshttps://patch-diff.githubusercontent.com/ModelDBRepository/243508/tags
https://patch-diff.githubusercontent.com/ModelDBRepository/243508/branches
https://patch-diff.githubusercontent.com/ModelDBRepository/243508/tags
1 Commithttps://patch-diff.githubusercontent.com/ModelDBRepository/243508/commits/master/
https://patch-diff.githubusercontent.com/ModelDBRepository/243508/commits/master/
clusterCaSimhttps://patch-diff.githubusercontent.com/ModelDBRepository/243508/tree/master/clusterCaSim
clusterCaSimhttps://patch-diff.githubusercontent.com/ModelDBRepository/243508/tree/master/clusterCaSim
nanoGeometryhttps://patch-diff.githubusercontent.com/ModelDBRepository/243508/tree/master/nanoGeometry
nanoGeometryhttps://patch-diff.githubusercontent.com/ModelDBRepository/243508/tree/master/nanoGeometry
neuronSimshttps://patch-diff.githubusercontent.com/ModelDBRepository/243508/tree/master/neuronSims
neuronSimshttps://patch-diff.githubusercontent.com/ModelDBRepository/243508/tree/master/neuronSims
scriptshttps://patch-diff.githubusercontent.com/ModelDBRepository/243508/tree/master/scripts
scriptshttps://patch-diff.githubusercontent.com/ModelDBRepository/243508/tree/master/scripts
ASTRO_User_Guide_v7.pdfhttps://patch-diff.githubusercontent.com/ModelDBRepository/243508/blob/master/ASTRO_User_Guide_v7.pdf
ASTRO_User_Guide_v7.pdfhttps://patch-diff.githubusercontent.com/ModelDBRepository/243508/blob/master/ASTRO_User_Guide_v7.pdf
README.mdhttps://patch-diff.githubusercontent.com/ModelDBRepository/243508/blob/master/README.md
README.mdhttps://patch-diff.githubusercontent.com/ModelDBRepository/243508/blob/master/README.md
Start.mhttps://patch-diff.githubusercontent.com/ModelDBRepository/243508/blob/master/Start.m
Start.mhttps://patch-diff.githubusercontent.com/ModelDBRepository/243508/blob/master/Start.m
neuron_home_lin.shhttps://patch-diff.githubusercontent.com/ModelDBRepository/243508/blob/master/neuron_home_lin.sh
neuron_home_lin.shhttps://patch-diff.githubusercontent.com/ModelDBRepository/243508/blob/master/neuron_home_lin.sh
neuron_home_win.bathttps://patch-diff.githubusercontent.com/ModelDBRepository/243508/blob/master/neuron_home_win.bat
neuron_home_win.bathttps://patch-diff.githubusercontent.com/ModelDBRepository/243508/blob/master/neuron_home_win.bat
testshape.dat_radii_dist.txthttps://patch-diff.githubusercontent.com/ModelDBRepository/243508/blob/master/testshape.dat_radii_dist.txt
testshape.dat_radii_dist.txthttps://patch-diff.githubusercontent.com/ModelDBRepository/243508/blob/master/testshape.dat_radii_dist.txt
READMEhttps://patch-diff.githubusercontent.com/ModelDBRepository/243508
https://patch-diff.githubusercontent.com/ModelDBRepository/243508#astro
https://patch-diff.githubusercontent.com/ModelDBRepository/243508#14122017
https://patch-diff.githubusercontent.com/ModelDBRepository/243508#version-10
https://patch-diff.githubusercontent.com/ModelDBRepository/243508#experimental-data-or-estimates-desirable-to-build-a-realistic-astrocyte-model
https://patch-diff.githubusercontent.com/ModelDBRepository/243508#1-a-3d-reconstructed-tree-of-main-identifiable-astroglial-processes-importable-into-neuron-alternatively-this-could-be-an-artificially-generated-cell-arbour-with-the-branching-pattern-and-branch-diameters-representing-the-average-typical-astrocyte-from-the-population-of-interest
https://patch-diff.githubusercontent.com/ModelDBRepository/243508#2-a-sample-20-50-of-nanoscopic-astroglial-processes-reconstructed-using-3d-serial-section-em-with-rendered-surface-co-ordinates-this-sample-will-be-used-to-obtain-statistical-properties-of-the-ultrathin-processes-to-be-generated-in-the-model
https://patch-diff.githubusercontent.com/ModelDBRepository/243508#3-average-tissue-volume-fraction-occupied-by-astroglia-as-distributed-radially-from-the-soma-to-the-cell-edges-this-data-set-is-obtained-from-two-photon-excitation-measurements-in-situ-or-from-published-data
https://patch-diff.githubusercontent.com/ModelDBRepository/243508#4-the-mean-membrane-surface-density-and-the-surface-to-volume-fraction-values-obtained-from-3d-reconstructions-of-nanoscopic-astroglial-processes
https://patch-diff.githubusercontent.com/ModelDBRepository/243508#5-the-characteristic-i-v-curve-somatic-patch-clamp-square-pulse-current-injections-for-the-astroglia-of-interest-other-optional-available-functional-data-such-as-electrical-responses-to-glutamate-uncaging-or-changes-in-extracellular-potassium-intracellular-calcium-wave-speed-etc
https://patch-diff.githubusercontent.com/ModelDBRepository/243508#installation
https://patch-diff.githubusercontent.com/ModelDBRepository/243508#system-requirements-for-astro
https://patch-diff.githubusercontent.com/ModelDBRepository/243508#the-basic-languages--c-matlab-not-older-2013-and-neuron-70
https://patch-diff.githubusercontent.com/ModelDBRepository/243508#platform--linux-and-windows
https://patch-diff.githubusercontent.com/ModelDBRepository/243508#type-of-operation--sequential-and-parallel-mpi-computing
https://patch-diff.githubusercontent.com/ModelDBRepository/243508#setting-up-and-running-astro-main-regimes-of-modelling
https://neuron.yale.edu/neuron/downloadhttps://neuron.yale.edu/neuron/download
https://patch-diff.githubusercontent.com/ModelDBRepository/243508#1constructing-astroglial-morphology-nano-geometry-host-computer-only-required-importing-the-3d-main-branch-morphology-of-astroglia-into-neuron-generating-within-the-neuron-environment-the-nanoscopic-astroglial-protrusions-that-reflect-experimental-data-this-regime-can-be-run-separately-from-other-parts-of-astro-it-requires-a-host-computer-with-matlab-2012-or-later-and-neuron-72-or-later-httpsneuronyaleeduneurondownload-installed-under-windows-7-or-10
https://neuron.yale.edu/neuron/downloadhttps://neuron.yale.edu/neuron/download
https://patch-diff.githubusercontent.com/ModelDBRepository/243508#2neuron-based-simulations-of-membrane-mechanisms-neuron-simulations-host-computer-only-required-further-adjustment-of-the-astrocyte-morphology-in-accord-with-volumetric-data-populating-the-cell-with-membrane-mechanisms-setting-up-simulation-configurations-and-protocols-this-regime-can-be-run-separately-from-other-parts-of-astro-it-requires-a-host-computer-with-matlab-2012-or-later-and-neuron-72-or-later-httpsneuronyaleeduneurondownload-installed-under-windows-7-or-10
https://neuron.yale.edu/neuron/downloadhttps://neuron.yale.edu/neuron/download
https://neuron.yale.edu/neuron/download/compile_linuxhttps://neuron.yale.edu/neuron/download/compile_linux
https://patch-diff.githubusercontent.com/ModelDBRepository/243508#3simulating-full-scale-ca2-dynamics-calcium-dynamics-on-cluster-host-and-worker-computers-normally-required-design-and-simulations-of-longer-term-seconds-to-minutes-intracellular-calcium-dynamics-within-realistic-geometry-using-the-cluster--cloud-based-parallel-computing-this-regime-can-be-run-separately-from-other-parts-of-astro-it-requires-a-host-computer-with-matlab-2012-or-later-and-neuron-72-or-later-httpsneuronyaleeduneurondownload-installed-under-windows-7-or-10-and-worker-computer--cluster-operating-under-linux-and-with-preinstalled-neuron-httpsneuronyaleeduneurondownloadcompile_linux-and-mpi
https://patch-diff.githubusercontent.com/ModelDBRepository/243508#briefly-in-this-regime-the-user-working-on-the-host-computer-with-matlab-creates-a-mat-file-containing-instructions-for-computation-uploads-this-file-to-the-worker-cluster-and-launches-there-the-simulations-of-astroglial-ca2-dynamics-independently-of-the-host-computer-the-host-computer-connects-intermittently-to-the-worker-time-a-to-monitor-computation-progress-and-b-to-download-intermediate-simulation-results-that-are-displayed-and-saved-in-matlab-once-simulations-have-been-completed-the-matlab-module-running-on-the-host-computer-downloads-the-output-mat-file-and-visualises-the-computation-results
https://patch-diff.githubusercontent.com/ModelDBRepository/243508#documentation
https://github.com/LeonidSavtchenko/Astrohttps://github.com/LeonidSavtchenko/Astro
http://www.ucl.ac.uk/ion/departments/epilepsy/themes/synaptic-imaginghttp://www.ucl.ac.uk/ion/departments/epilepsy/themes/synaptic-imaging
modeldb.science/243508https://modeldb.science/243508
astrocyte https://patch-diff.githubusercontent.com/topics/astrocyte
neuron-simulator https://patch-diff.githubusercontent.com/topics/neuron-simulator
calcium-waves-calcium-dynamics-potassium-buffering https://patch-diff.githubusercontent.com/topics/calcium-waves-calcium-dynamics-potassium-buffering
Readme https://patch-diff.githubusercontent.com/ModelDBRepository/243508#readme-ov-file
Please reload this pagehttps://patch-diff.githubusercontent.com/ModelDBRepository/243508
Activityhttps://patch-diff.githubusercontent.com/ModelDBRepository/243508/activity
Custom propertieshttps://patch-diff.githubusercontent.com/ModelDBRepository/243508/custom-properties
0 starshttps://patch-diff.githubusercontent.com/ModelDBRepository/243508/stargazers
2 watchinghttps://patch-diff.githubusercontent.com/ModelDBRepository/243508/watchers
1 forkhttps://patch-diff.githubusercontent.com/ModelDBRepository/243508/forks
Report repository https://patch-diff.githubusercontent.com/contact/report-content?content_url=https%3A%2F%2Fgithub.com%2FModelDBRepository%2F243508&report=ModelDBRepository+%28user%29
Releaseshttps://patch-diff.githubusercontent.com/ModelDBRepository/243508/releases
Packages 0https://patch-diff.githubusercontent.com/orgs/ModelDBRepository/packages?repo_name=243508
MATLAB 63.5% https://patch-diff.githubusercontent.com/ModelDBRepository/243508/search?l=matlab
AMPL 21.1% https://patch-diff.githubusercontent.com/ModelDBRepository/243508/search?l=ampl
Wolfram Language 7.7% https://patch-diff.githubusercontent.com/ModelDBRepository/243508/search?l=wolfram-language
Batchfile 5.6% https://patch-diff.githubusercontent.com/ModelDBRepository/243508/search?l=batchfile
Shell 2.1% https://patch-diff.githubusercontent.com/ModelDBRepository/243508/search?l=shell
https://github.com
Termshttps://docs.github.com/site-policy/github-terms/github-terms-of-service
Privacyhttps://docs.github.com/site-policy/privacy-policies/github-privacy-statement
Securityhttps://github.com/security
Statushttps://www.githubstatus.com/
Communityhttps://github.community/
Docshttps://docs.github.com/
Contacthttps://support.github.com?tags=dotcom-footer

Viewport: width=device-width


URLs of crawlers that visited me.