René's URL Explorer Experiment


Title: GitHub - Matrisome/MatriCom: MatriCom: matrisome communications in single-cell RNA-seq datasets

Open Graph Title: GitHub - Matrisome/MatriCom: MatriCom: matrisome communications in single-cell RNA-seq datasets

X Title: GitHub - Matrisome/MatriCom: MatriCom: matrisome communications in single-cell RNA-seq datasets

Description: MatriCom: matrisome communications in single-cell RNA-seq datasets - Matrisome/MatriCom

Open Graph Description: MatriCom: matrisome communications in single-cell RNA-seq datasets - Matrisome/MatriCom

X Description: MatriCom: matrisome communications in single-cell RNA-seq datasets - Matrisome/MatriCom

Mail addresses
valerio.izzi@oulu.fi
anaba@uic.edu

Opengraph URL: https://github.com/Matrisome/MatriCom

X: @github

direct link

Domain: patch-diff.githubusercontent.com

route-pattern/:user_id/:repository
route-controllerfiles
route-actiondisambiguate
fetch-noncev2:16bc7521-9b80-ddab-db86-f18cbe4e98ed
current-catalog-service-hashf3abb0cc802f3d7b95fc8762b94bdcb13bf39634c40c357301c4aa1d67a256fb
request-idD4C0:3AB510:A6093C:D9413C:698D668E
html-safe-nonceb7d38055299f236d7ff1d5d783001124f1d4d68cf4fa1dd7527dc7f026f3b2ed
visitor-payloadeyJyZWZlcnJlciI6IiIsInJlcXVlc3RfaWQiOiJENEMwOjNBQjUxMDpBNjA5M0M6RDk0MTNDOjY5OEQ2NjhFIiwidmlzaXRvcl9pZCI6Ijg2ODEwMzc1NTg4NTc5NTA4NjIiLCJyZWdpb25fZWRnZSI6ImlhZCIsInJlZ2lvbl9yZW5kZXIiOiJpYWQifQ==
visitor-hmac2d951d88a36e0c227113d616838d662cfdb26e1ceb197a259d4a442f8af81d69
hovercard-subject-tagrepository:856933518
github-keyboard-shortcutsrepository,copilot
google-site-verificationApib7-x98H0j5cPqHWwSMm6dNU4GmODRoqxLiDzdx9I
octolytics-urlhttps://collector.github.com/github/collect
analytics-location//
fb:app_id1401488693436528
apple-itunes-appapp-id=1477376905, app-argument=https://github.com/Matrisome/MatriCom
twitter:imagehttps://opengraph.githubassets.com/2e6b18e33fd276f6df49103c7ed2b86e06c13aefe67f13d4908465f7bf7fd865/Matrisome/MatriCom
twitter:cardsummary_large_image
og:imagehttps://opengraph.githubassets.com/2e6b18e33fd276f6df49103c7ed2b86e06c13aefe67f13d4908465f7bf7fd865/Matrisome/MatriCom
og:image:altMatriCom: matrisome communications in single-cell RNA-seq datasets - Matrisome/MatriCom
og:image:width1200
og:image:height600
og:site_nameGitHub
og:typeobject
hostnamegithub.com
expected-hostnamegithub.com
Nonec0818105fa276287e9369cfdefa0a0fa7953719791ceff9b94d69623c0a4fe8a
turbo-cache-controlno-preview
go-importgithub.com/Matrisome/MatriCom git https://github.com/Matrisome/MatriCom.git
octolytics-dimension-user_id68196795
octolytics-dimension-user_loginMatrisome
octolytics-dimension-repository_id856933518
octolytics-dimension-repository_nwoMatrisome/MatriCom
octolytics-dimension-repository_publictrue
octolytics-dimension-repository_is_forkfalse
octolytics-dimension-repository_network_root_id856933518
octolytics-dimension-repository_network_root_nwoMatrisome/MatriCom
turbo-body-classeslogged-out env-production page-responsive
disable-turbofalse
browser-stats-urlhttps://api.github.com/_private/browser/stats
browser-errors-urlhttps://api.github.com/_private/browser/errors
release715890fa442134f528fb422ab338c0ad55c7a025
ui-targetfull
theme-color#1e2327
color-schemelight dark

Links:

Skip to contenthttps://patch-diff.githubusercontent.com/Matrisome/MatriCom#start-of-content
https://patch-diff.githubusercontent.com/
Sign in https://patch-diff.githubusercontent.com/login?return_to=https%3A%2F%2Fgithub.com%2FMatrisome%2FMatriCom
GitHub CopilotWrite better code with AIhttps://github.com/features/copilot
GitHub SparkBuild and deploy intelligent appshttps://github.com/features/spark
GitHub ModelsManage and compare promptshttps://github.com/features/models
MCP RegistryNewIntegrate external toolshttps://github.com/mcp
ActionsAutomate any workflowhttps://github.com/features/actions
CodespacesInstant dev environmentshttps://github.com/features/codespaces
IssuesPlan and track workhttps://github.com/features/issues
Code ReviewManage code changeshttps://github.com/features/code-review
GitHub Advanced SecurityFind and fix vulnerabilitieshttps://github.com/security/advanced-security
Code securitySecure your code as you buildhttps://github.com/security/advanced-security/code-security
Secret protectionStop leaks before they starthttps://github.com/security/advanced-security/secret-protection
Why GitHubhttps://github.com/why-github
Documentationhttps://docs.github.com
Bloghttps://github.blog
Changeloghttps://github.blog/changelog
Marketplacehttps://github.com/marketplace
View all featureshttps://github.com/features
Enterpriseshttps://github.com/enterprise
Small and medium teamshttps://github.com/team
Startupshttps://github.com/enterprise/startups
Nonprofitshttps://github.com/solutions/industry/nonprofits
App Modernizationhttps://github.com/solutions/use-case/app-modernization
DevSecOpshttps://github.com/solutions/use-case/devsecops
DevOpshttps://github.com/solutions/use-case/devops
CI/CDhttps://github.com/solutions/use-case/ci-cd
View all use caseshttps://github.com/solutions/use-case
Healthcarehttps://github.com/solutions/industry/healthcare
Financial serviceshttps://github.com/solutions/industry/financial-services
Manufacturinghttps://github.com/solutions/industry/manufacturing
Governmenthttps://github.com/solutions/industry/government
View all industrieshttps://github.com/solutions/industry
View all solutionshttps://github.com/solutions
AIhttps://github.com/resources/articles?topic=ai
Software Developmenthttps://github.com/resources/articles?topic=software-development
DevOpshttps://github.com/resources/articles?topic=devops
Securityhttps://github.com/resources/articles?topic=security
View all topicshttps://github.com/resources/articles
Customer storieshttps://github.com/customer-stories
Events & webinarshttps://github.com/resources/events
Ebooks & reportshttps://github.com/resources/whitepapers
Business insightshttps://github.com/solutions/executive-insights
GitHub Skillshttps://skills.github.com
Documentationhttps://docs.github.com
Customer supporthttps://support.github.com
Community forumhttps://github.com/orgs/community/discussions
Trust centerhttps://github.com/trust-center
Partnershttps://github.com/partners
GitHub SponsorsFund open source developershttps://github.com/sponsors
Security Labhttps://securitylab.github.com
Maintainer Communityhttps://maintainers.github.com
Acceleratorhttps://github.com/accelerator
Archive Programhttps://archiveprogram.github.com
Topicshttps://github.com/topics
Trendinghttps://github.com/trending
Collectionshttps://github.com/collections
Enterprise platformAI-powered developer platformhttps://github.com/enterprise
GitHub Advanced SecurityEnterprise-grade security featureshttps://github.com/security/advanced-security
Copilot for BusinessEnterprise-grade AI featureshttps://github.com/features/copilot/copilot-business
Premium SupportEnterprise-grade 24/7 supporthttps://github.com/premium-support
Pricinghttps://github.com/pricing
Search syntax tipshttps://docs.github.com/search-github/github-code-search/understanding-github-code-search-syntax
documentationhttps://docs.github.com/search-github/github-code-search/understanding-github-code-search-syntax
Sign in https://patch-diff.githubusercontent.com/login?return_to=https%3A%2F%2Fgithub.com%2FMatrisome%2FMatriCom
Sign up https://patch-diff.githubusercontent.com/signup?ref_cta=Sign+up&ref_loc=header+logged+out&ref_page=%2F%3Cuser-name%3E%2F%3Crepo-name%3E&source=header-repo&source_repo=Matrisome%2FMatriCom
Reloadhttps://patch-diff.githubusercontent.com/Matrisome/MatriCom
Reloadhttps://patch-diff.githubusercontent.com/Matrisome/MatriCom
Reloadhttps://patch-diff.githubusercontent.com/Matrisome/MatriCom
Matrisome https://patch-diff.githubusercontent.com/Matrisome
MatriComhttps://patch-diff.githubusercontent.com/Matrisome/MatriCom
Notifications https://patch-diff.githubusercontent.com/login?return_to=%2FMatrisome%2FMatriCom
Fork 0 https://patch-diff.githubusercontent.com/login?return_to=%2FMatrisome%2FMatriCom
Star 1 https://patch-diff.githubusercontent.com/login?return_to=%2FMatrisome%2FMatriCom
matrinet.shinyapps.io/matricom/https://matrinet.shinyapps.io/matricom/
Unknown LICENSE https://patch-diff.githubusercontent.com/Matrisome/MatriCom/blob/main/LICENSE
GPL-3.0 LICENSE.md https://patch-diff.githubusercontent.com/Matrisome/MatriCom/blob/main/LICENSE.md
1 star https://patch-diff.githubusercontent.com/Matrisome/MatriCom/stargazers
0 forks https://patch-diff.githubusercontent.com/Matrisome/MatriCom/forks
Branches https://patch-diff.githubusercontent.com/Matrisome/MatriCom/branches
Tags https://patch-diff.githubusercontent.com/Matrisome/MatriCom/tags
Activity https://patch-diff.githubusercontent.com/Matrisome/MatriCom/activity
Star https://patch-diff.githubusercontent.com/login?return_to=%2FMatrisome%2FMatriCom
Notifications https://patch-diff.githubusercontent.com/login?return_to=%2FMatrisome%2FMatriCom
Code https://patch-diff.githubusercontent.com/Matrisome/MatriCom
Pull requests 0 https://patch-diff.githubusercontent.com/Matrisome/MatriCom/pulls
Actions https://patch-diff.githubusercontent.com/Matrisome/MatriCom/actions
Projects 0 https://patch-diff.githubusercontent.com/Matrisome/MatriCom/projects
Security 0 https://patch-diff.githubusercontent.com/Matrisome/MatriCom/security
Insights https://patch-diff.githubusercontent.com/Matrisome/MatriCom/pulse
Code https://patch-diff.githubusercontent.com/Matrisome/MatriCom
Pull requests https://patch-diff.githubusercontent.com/Matrisome/MatriCom/pulls
Actions https://patch-diff.githubusercontent.com/Matrisome/MatriCom/actions
Projects https://patch-diff.githubusercontent.com/Matrisome/MatriCom/projects
Security https://patch-diff.githubusercontent.com/Matrisome/MatriCom/security
Insights https://patch-diff.githubusercontent.com/Matrisome/MatriCom/pulse
Brancheshttps://patch-diff.githubusercontent.com/Matrisome/MatriCom/branches
Tagshttps://patch-diff.githubusercontent.com/Matrisome/MatriCom/tags
https://patch-diff.githubusercontent.com/Matrisome/MatriCom/branches
https://patch-diff.githubusercontent.com/Matrisome/MatriCom/tags
42 Commitshttps://patch-diff.githubusercontent.com/Matrisome/MatriCom/commits/main/
https://patch-diff.githubusercontent.com/Matrisome/MatriCom/commits/main/
Rhttps://patch-diff.githubusercontent.com/Matrisome/MatriCom/tree/main/R
Rhttps://patch-diff.githubusercontent.com/Matrisome/MatriCom/tree/main/R
data-rawhttps://patch-diff.githubusercontent.com/Matrisome/MatriCom/tree/main/data-raw
data-rawhttps://patch-diff.githubusercontent.com/Matrisome/MatriCom/tree/main/data-raw
datahttps://patch-diff.githubusercontent.com/Matrisome/MatriCom/tree/main/data
datahttps://patch-diff.githubusercontent.com/Matrisome/MatriCom/tree/main/data
insthttps://patch-diff.githubusercontent.com/Matrisome/MatriCom/tree/main/inst
insthttps://patch-diff.githubusercontent.com/Matrisome/MatriCom/tree/main/inst
manhttps://patch-diff.githubusercontent.com/Matrisome/MatriCom/tree/main/man
manhttps://patch-diff.githubusercontent.com/Matrisome/MatriCom/tree/main/man
DESCRIPTIONhttps://patch-diff.githubusercontent.com/Matrisome/MatriCom/blob/main/DESCRIPTION
DESCRIPTIONhttps://patch-diff.githubusercontent.com/Matrisome/MatriCom/blob/main/DESCRIPTION
INSTALL.mdhttps://patch-diff.githubusercontent.com/Matrisome/MatriCom/blob/main/INSTALL.md
INSTALL.mdhttps://patch-diff.githubusercontent.com/Matrisome/MatriCom/blob/main/INSTALL.md
LICENSEhttps://patch-diff.githubusercontent.com/Matrisome/MatriCom/blob/main/LICENSE
LICENSEhttps://patch-diff.githubusercontent.com/Matrisome/MatriCom/blob/main/LICENSE
LICENSE.mdhttps://patch-diff.githubusercontent.com/Matrisome/MatriCom/blob/main/LICENSE.md
LICENSE.mdhttps://patch-diff.githubusercontent.com/Matrisome/MatriCom/blob/main/LICENSE.md
MatriCom.Rprojhttps://patch-diff.githubusercontent.com/Matrisome/MatriCom/blob/main/MatriCom.Rproj
MatriCom.Rprojhttps://patch-diff.githubusercontent.com/Matrisome/MatriCom/blob/main/MatriCom.Rproj
NAMESPACEhttps://patch-diff.githubusercontent.com/Matrisome/MatriCom/blob/main/NAMESPACE
NAMESPACEhttps://patch-diff.githubusercontent.com/Matrisome/MatriCom/blob/main/NAMESPACE
README.mdhttps://patch-diff.githubusercontent.com/Matrisome/MatriCom/blob/main/README.md
README.mdhttps://patch-diff.githubusercontent.com/Matrisome/MatriCom/blob/main/README.md
READMEhttps://patch-diff.githubusercontent.com/Matrisome/MatriCom
Licensehttps://patch-diff.githubusercontent.com/Matrisome/MatriCom
GPL-3.0 licensehttps://patch-diff.githubusercontent.com/Matrisome/MatriCom
https://patch-diff.githubusercontent.com/Matrisome/MatriCom#matricom-a-tool-to-infer-matrisome-communication-systems-in-single-cell-rna-seq-datasets
https://matrinet.shinyapps.io/matricom/https://matrinet.shinyapps.io/matricom/
INSTALLhttps://patch-diff.githubusercontent.com/Matrisome/MatriCom/blob/main/INSTALL.md
herehttps://patch-diff.githubusercontent.com/Matrisome/MatriCom/blob/main/inst/webApp/www/MatricomDB
MatriCom-analyseshttps://github.com/Izzilab/MatriCom-analyses
manuscripthttps://doi.org/10.1242/jcs.263927
https://matrinet.shinyapps.io/matricom/
https://patch-diff.githubusercontent.com/Matrisome/MatriCom/blob/main/INSTALL.md
https://patch-diff.githubusercontent.com/Matrisome/MatriCom/blob/main/inst/webApp/www/MatricomDB
https://github.com/Izzilab/MatriCom-analyses
https://doi.org/XXX
https://github.com/Izzilab/matRicom/releases/tag/1.0
https://commonfund.nih.gov/HuBMAP
https://www.cancer.gov/about-nci/organization/cssi/research/imat
https://syopasaatio.fi/
https://www.oulu.fi/en/research/creating-better-health-our-digital-health-knowhow
https://patch-diff.githubusercontent.com/Matrisome/MatriCom#motivation
https://patch-diff.githubusercontent.com/Matrisome/MatriCom#matricomdb
herehttps://patch-diff.githubusercontent.com/Matrisome/MatriCom/blob/main/inst/webApp/www/MatriComDB.xlsx
MatrixDBhttp://matrixdb.univ-lyon1.fr/
basement membraneBASEhttps://bmbase.manchester.ac.uk/
KEGGhttps://www.genome.jp/kegg/
Focal adhesion, hsa04510https://www.genome.jp/entry/hsa04510
ECM-receptor interaction, hsa04512https://www.genome.jp/entry/hsa04512
STRINGhttps://string-db.org/
BioGRIDhttps://thebiogrid.org/
OmniPathhttps://omnipathdb.org/
https://patch-diff.githubusercontent.com/Matrisome/MatriCom/blob/main/inst/webApp/www/f1.png
The Matrisome Projecthttps://sites.google.com/uic.edu/matrisome/home
The Matrisome Projecthttps://sites.google.com/uic.edu/matrisome/home
The in silico human Surfaceomehttps://doi.org/10.1073/pnas.1808790115
Gene Ontology GO:0005576 (extracellular region)https://www.ebi.ac.uk/QuickGO/term/GO:0005576
https://patch-diff.githubusercontent.com/Matrisome/MatriCom#workflow
https://patch-diff.githubusercontent.com/Matrisome/MatriCom/blob/main/inst/webApp/www/f2.png
https://patch-diff.githubusercontent.com/Matrisome/MatriCom#data-input
Tabula Sapienshttps://tabula-sapiens-portal.ds.czbiohub.org/
The Human Protein Atlashttps://www.proteinatlas.org/
Azimuthhttps://azimuth.hubmapconsortium.org/
Censushttps://github.com/sjdlabgroup/Census
https://patch-diff.githubusercontent.com/Matrisome/MatriCom#query-parameters
Results Outputhttps://patch-diff.githubusercontent.com/Matrisome/MatriCom#results-output
https://patch-diff.githubusercontent.com/Matrisome/MatriCom/blob/main/inst/webApp/www/f3.png
https://patch-diff.githubusercontent.com/Matrisome/MatriCom#filters
MatriComDBhttps://patch-diff.githubusercontent.com/Matrisome/MatriCom#matricomdb
MatriComDBhttps://patch-diff.githubusercontent.com/Matrisome/MatriCom#matricomdb
https://patch-diff.githubusercontent.com/Matrisome/MatriCom#results-output
matrisome-MSigDBhttps://sites.google.com/uic.edu/matrisome/resources/matrisome-msigdb
https://patch-diff.githubusercontent.com/Matrisome/MatriCom/blob/main/inst/webApp/www/f4.png
https://patch-diff.githubusercontent.com/Matrisome/MatriCom#see-also
Naba Labhttps://sites.google.com/a/uic.edu/nabalab/
@GitHubhttps://github.com/Matrisome/
Izzi Labhttps://www.oulu.fi/en/research-groups/izzi-group
@GitHubhttps://github.com/izzilab
The Matrisome Projecthttps://sites.google.com/uic.edu/matrisome/home
MatrisomeDBhttps://matrisomedb.org/
MatrisomeAnalyzeRhttps://github.com/Matrisome/MatrisomeAnalyzeR
MatriNethttps://www.matrinet.org/
ProToDeviseRhttps://github.com/Izzilab/protodeviser
matrinet.shinyapps.io/matricom/https://matrinet.shinyapps.io/matricom/
scrna-seq https://patch-diff.githubusercontent.com/topics/scrna-seq
ecm https://patch-diff.githubusercontent.com/topics/ecm
interaction https://patch-diff.githubusercontent.com/topics/interaction
network-analysis https://patch-diff.githubusercontent.com/topics/network-analysis
scrna-seq-analysis https://patch-diff.githubusercontent.com/topics/scrna-seq-analysis
extracellular-matrix https://patch-diff.githubusercontent.com/topics/extracellular-matrix
matrisome https://patch-diff.githubusercontent.com/topics/matrisome
Readme https://patch-diff.githubusercontent.com/Matrisome/MatriCom#readme-ov-file
Unknown LICENSE https://patch-diff.githubusercontent.com/Matrisome/MatriCom/blob/main/LICENSE
GPL-3.0 LICENSE.md https://patch-diff.githubusercontent.com/Matrisome/MatriCom/blob/main/LICENSE.md
Please reload this pagehttps://patch-diff.githubusercontent.com/Matrisome/MatriCom
Activityhttps://patch-diff.githubusercontent.com/Matrisome/MatriCom/activity
1 starhttps://patch-diff.githubusercontent.com/Matrisome/MatriCom/stargazers
0 watchinghttps://patch-diff.githubusercontent.com/Matrisome/MatriCom/watchers
0 forkshttps://patch-diff.githubusercontent.com/Matrisome/MatriCom/forks
Report repository https://patch-diff.githubusercontent.com/contact/report-content?content_url=https%3A%2F%2Fgithub.com%2FMatrisome%2FMatriCom&report=Matrisome+%28user%29
Releaseshttps://patch-diff.githubusercontent.com/Matrisome/MatriCom/releases
Packages 0https://patch-diff.githubusercontent.com/users/Matrisome/packages?repo_name=MatriCom
Contributors 2https://patch-diff.githubusercontent.com/Matrisome/MatriCom/graphs/contributors
Please reload this pagehttps://patch-diff.githubusercontent.com/Matrisome/MatriCom
R 100.0% https://patch-diff.githubusercontent.com/Matrisome/MatriCom/search?l=r
https://github.com
Termshttps://docs.github.com/site-policy/github-terms/github-terms-of-service
Privacyhttps://docs.github.com/site-policy/privacy-policies/github-privacy-statement
Securityhttps://github.com/security
Statushttps://www.githubstatus.com/
Communityhttps://github.community/
Docshttps://docs.github.com/
Contacthttps://support.github.com?tags=dotcom-footer

Viewport: width=device-width


URLs of crawlers that visited me.