René's URL Explorer Experiment


Title: GitHub - FoxoTech/methylprep: Python-based preprocessing software for Illumina methylation arrays

Open Graph Title: GitHub - FoxoTech/methylprep: Python-based preprocessing software for Illumina methylation arrays

X Title: GitHub - FoxoTech/methylprep: Python-based preprocessing software for Illumina methylation arrays

Description: Python-based preprocessing software for Illumina methylation arrays - FoxoTech/methylprep

Open Graph Description: Python-based preprocessing software for Illumina methylation arrays - FoxoTech/methylprep

X Description: Python-based preprocessing software for Illumina methylation arrays - FoxoTech/methylprep

Opengraph URL: https://github.com/FoxoTech/methylprep

X: @github

direct link

Domain: patch-diff.githubusercontent.com

route-pattern/:user_id/:repository
route-controllerfiles
route-actiondisambiguate
fetch-noncev2:521a9ce5-685c-619e-0a99-c521f326d6d0
current-catalog-service-hashf3abb0cc802f3d7b95fc8762b94bdcb13bf39634c40c357301c4aa1d67a256fb
request-idDBE8:2809D9:C106365:10100D4F:698C6310
html-safe-nonceb71ffc4dbbd65cb4cff44341b2ef21b2f8c468af7f9007ba002350b33504c95c
visitor-payloadeyJyZWZlcnJlciI6IiIsInJlcXVlc3RfaWQiOiJEQkU4OjI4MDlEOTpDMTA2MzY1OjEwMTAwRDRGOjY5OEM2MzEwIiwidmlzaXRvcl9pZCI6IjI0MDk5NjgyNzI3MjA3ODA5NiIsInJlZ2lvbl9lZGdlIjoiaWFkIiwicmVnaW9uX3JlbmRlciI6ImlhZCJ9
visitor-hmacffb941e8cb2b912dc0b051eb4eceda95509e099389de8a5d1ef0baafc831fdb5
hovercard-subject-tagrepository:193781659
github-keyboard-shortcutsrepository,copilot
google-site-verificationApib7-x98H0j5cPqHWwSMm6dNU4GmODRoqxLiDzdx9I
octolytics-urlhttps://collector.github.com/github/collect
analytics-location//
fb:app_id1401488693436528
apple-itunes-appapp-id=1477376905, app-argument=https://github.com/FoxoTech/methylprep
twitter:imagehttps://repository-images.githubusercontent.com/193781659/a8200680-975b-11e9-934c-608474014f7c
twitter:cardsummary_large_image
og:imagehttps://repository-images.githubusercontent.com/193781659/a8200680-975b-11e9-934c-608474014f7c
og:image:altPython-based preprocessing software for Illumina methylation arrays - FoxoTech/methylprep
og:site_nameGitHub
og:typeobject
hostnamegithub.com
expected-hostnamegithub.com
None640eeb7b6ff4d8d106235d228c0c286e82592d4d2403227b5b2b4fc5832297a4
turbo-cache-controlno-preview
go-importgithub.com/FoxoTech/methylprep git https://github.com/FoxoTech/methylprep.git
octolytics-dimension-user_id35784106
octolytics-dimension-user_loginFoxoTech
octolytics-dimension-repository_id193781659
octolytics-dimension-repository_nwoFoxoTech/methylprep
octolytics-dimension-repository_publictrue
octolytics-dimension-repository_is_forkfalse
octolytics-dimension-repository_network_root_id193781659
octolytics-dimension-repository_network_root_nwoFoxoTech/methylprep
turbo-body-classeslogged-out env-production page-responsive
disable-turbofalse
browser-stats-urlhttps://api.github.com/_private/browser/stats
browser-errors-urlhttps://api.github.com/_private/browser/errors
release3d444f0a47beeeac94cddbb51c91ab408befe8d4
ui-targetfull
theme-color#1e2327
color-schemelight dark

Links:

Skip to contenthttps://patch-diff.githubusercontent.com/FoxoTech/methylprep#start-of-content
https://patch-diff.githubusercontent.com/
Sign in https://patch-diff.githubusercontent.com/login?return_to=https%3A%2F%2Fgithub.com%2FFoxoTech%2Fmethylprep
GitHub CopilotWrite better code with AIhttps://github.com/features/copilot
GitHub SparkBuild and deploy intelligent appshttps://github.com/features/spark
GitHub ModelsManage and compare promptshttps://github.com/features/models
MCP RegistryNewIntegrate external toolshttps://github.com/mcp
ActionsAutomate any workflowhttps://github.com/features/actions
CodespacesInstant dev environmentshttps://github.com/features/codespaces
IssuesPlan and track workhttps://github.com/features/issues
Code ReviewManage code changeshttps://github.com/features/code-review
GitHub Advanced SecurityFind and fix vulnerabilitieshttps://github.com/security/advanced-security
Code securitySecure your code as you buildhttps://github.com/security/advanced-security/code-security
Secret protectionStop leaks before they starthttps://github.com/security/advanced-security/secret-protection
Why GitHubhttps://github.com/why-github
Documentationhttps://docs.github.com
Bloghttps://github.blog
Changeloghttps://github.blog/changelog
Marketplacehttps://github.com/marketplace
View all featureshttps://github.com/features
Enterpriseshttps://github.com/enterprise
Small and medium teamshttps://github.com/team
Startupshttps://github.com/enterprise/startups
Nonprofitshttps://github.com/solutions/industry/nonprofits
App Modernizationhttps://github.com/solutions/use-case/app-modernization
DevSecOpshttps://github.com/solutions/use-case/devsecops
DevOpshttps://github.com/solutions/use-case/devops
CI/CDhttps://github.com/solutions/use-case/ci-cd
View all use caseshttps://github.com/solutions/use-case
Healthcarehttps://github.com/solutions/industry/healthcare
Financial serviceshttps://github.com/solutions/industry/financial-services
Manufacturinghttps://github.com/solutions/industry/manufacturing
Governmenthttps://github.com/solutions/industry/government
View all industrieshttps://github.com/solutions/industry
View all solutionshttps://github.com/solutions
AIhttps://github.com/resources/articles?topic=ai
Software Developmenthttps://github.com/resources/articles?topic=software-development
DevOpshttps://github.com/resources/articles?topic=devops
Securityhttps://github.com/resources/articles?topic=security
View all topicshttps://github.com/resources/articles
Customer storieshttps://github.com/customer-stories
Events & webinarshttps://github.com/resources/events
Ebooks & reportshttps://github.com/resources/whitepapers
Business insightshttps://github.com/solutions/executive-insights
GitHub Skillshttps://skills.github.com
Documentationhttps://docs.github.com
Customer supporthttps://support.github.com
Community forumhttps://github.com/orgs/community/discussions
Trust centerhttps://github.com/trust-center
Partnershttps://github.com/partners
GitHub SponsorsFund open source developershttps://github.com/sponsors
Security Labhttps://securitylab.github.com
Maintainer Communityhttps://maintainers.github.com
Acceleratorhttps://github.com/accelerator
Archive Programhttps://archiveprogram.github.com
Topicshttps://github.com/topics
Trendinghttps://github.com/trending
Collectionshttps://github.com/collections
Enterprise platformAI-powered developer platformhttps://github.com/enterprise
GitHub Advanced SecurityEnterprise-grade security featureshttps://github.com/security/advanced-security
Copilot for BusinessEnterprise-grade AI featureshttps://github.com/features/copilot/copilot-business
Premium SupportEnterprise-grade 24/7 supporthttps://github.com/premium-support
Pricinghttps://github.com/pricing
Search syntax tipshttps://docs.github.com/search-github/github-code-search/understanding-github-code-search-syntax
documentationhttps://docs.github.com/search-github/github-code-search/understanding-github-code-search-syntax
Sign in https://patch-diff.githubusercontent.com/login?return_to=https%3A%2F%2Fgithub.com%2FFoxoTech%2Fmethylprep
Sign up https://patch-diff.githubusercontent.com/signup?ref_cta=Sign+up&ref_loc=header+logged+out&ref_page=%2F%3Cuser-name%3E%2F%3Crepo-name%3E&source=header-repo&source_repo=FoxoTech%2Fmethylprep
Reloadhttps://patch-diff.githubusercontent.com/FoxoTech/methylprep
Reloadhttps://patch-diff.githubusercontent.com/FoxoTech/methylprep
Reloadhttps://patch-diff.githubusercontent.com/FoxoTech/methylprep
FoxoTech https://patch-diff.githubusercontent.com/FoxoTech
methylprephttps://patch-diff.githubusercontent.com/FoxoTech/methylprep
Notifications https://patch-diff.githubusercontent.com/login?return_to=%2FFoxoTech%2Fmethylprep
Fork 15 https://patch-diff.githubusercontent.com/login?return_to=%2FFoxoTech%2Fmethylprep
Star 42 https://patch-diff.githubusercontent.com/login?return_to=%2FFoxoTech%2Fmethylprep
MIT license https://patch-diff.githubusercontent.com/FoxoTech/methylprep/blob/master/LICENSE
42 stars https://patch-diff.githubusercontent.com/FoxoTech/methylprep/stargazers
15 forks https://patch-diff.githubusercontent.com/FoxoTech/methylprep/forks
Branches https://patch-diff.githubusercontent.com/FoxoTech/methylprep/branches
Tags https://patch-diff.githubusercontent.com/FoxoTech/methylprep/tags
Activity https://patch-diff.githubusercontent.com/FoxoTech/methylprep/activity
Star https://patch-diff.githubusercontent.com/login?return_to=%2FFoxoTech%2Fmethylprep
Notifications https://patch-diff.githubusercontent.com/login?return_to=%2FFoxoTech%2Fmethylprep
Code https://patch-diff.githubusercontent.com/FoxoTech/methylprep
Issues 19 https://patch-diff.githubusercontent.com/FoxoTech/methylprep/issues
Pull requests 7 https://patch-diff.githubusercontent.com/FoxoTech/methylprep/pulls
Actions https://patch-diff.githubusercontent.com/FoxoTech/methylprep/actions
Projects 0 https://patch-diff.githubusercontent.com/FoxoTech/methylprep/projects
Security 0 https://patch-diff.githubusercontent.com/FoxoTech/methylprep/security
Insights https://patch-diff.githubusercontent.com/FoxoTech/methylprep/pulse
Code https://patch-diff.githubusercontent.com/FoxoTech/methylprep
Issues https://patch-diff.githubusercontent.com/FoxoTech/methylprep/issues
Pull requests https://patch-diff.githubusercontent.com/FoxoTech/methylprep/pulls
Actions https://patch-diff.githubusercontent.com/FoxoTech/methylprep/actions
Projects https://patch-diff.githubusercontent.com/FoxoTech/methylprep/projects
Security https://patch-diff.githubusercontent.com/FoxoTech/methylprep/security
Insights https://patch-diff.githubusercontent.com/FoxoTech/methylprep/pulse
Brancheshttps://patch-diff.githubusercontent.com/FoxoTech/methylprep/branches
Tagshttps://patch-diff.githubusercontent.com/FoxoTech/methylprep/tags
https://patch-diff.githubusercontent.com/FoxoTech/methylprep/branches
https://patch-diff.githubusercontent.com/FoxoTech/methylprep/tags
140 Commitshttps://patch-diff.githubusercontent.com/FoxoTech/methylprep/commits/master/
https://patch-diff.githubusercontent.com/FoxoTech/methylprep/commits/master/
.circlecihttps://patch-diff.githubusercontent.com/FoxoTech/methylprep/tree/master/.circleci
.circlecihttps://patch-diff.githubusercontent.com/FoxoTech/methylprep/tree/master/.circleci
.github/workflowshttps://patch-diff.githubusercontent.com/FoxoTech/methylprep/tree/master/.github/workflows
.github/workflowshttps://patch-diff.githubusercontent.com/FoxoTech/methylprep/tree/master/.github/workflows
_sphinx_statichttps://patch-diff.githubusercontent.com/FoxoTech/methylprep/tree/master/_sphinx_static
_sphinx_statichttps://patch-diff.githubusercontent.com/FoxoTech/methylprep/tree/master/_sphinx_static
docshttps://patch-diff.githubusercontent.com/FoxoTech/methylprep/tree/master/docs
docshttps://patch-diff.githubusercontent.com/FoxoTech/methylprep/tree/master/docs
methylprephttps://patch-diff.githubusercontent.com/FoxoTech/methylprep/tree/master/methylprep
methylprephttps://patch-diff.githubusercontent.com/FoxoTech/methylprep/tree/master/methylprep
testshttps://patch-diff.githubusercontent.com/FoxoTech/methylprep/tree/master/tests
testshttps://patch-diff.githubusercontent.com/FoxoTech/methylprep/tree/master/tests
.editorconfighttps://patch-diff.githubusercontent.com/FoxoTech/methylprep/blob/master/.editorconfig
.editorconfighttps://patch-diff.githubusercontent.com/FoxoTech/methylprep/blob/master/.editorconfig
.gitignorehttps://patch-diff.githubusercontent.com/FoxoTech/methylprep/blob/master/.gitignore
.gitignorehttps://patch-diff.githubusercontent.com/FoxoTech/methylprep/blob/master/.gitignore
.readthedocs.yamlhttps://patch-diff.githubusercontent.com/FoxoTech/methylprep/blob/master/.readthedocs.yaml
.readthedocs.yamlhttps://patch-diff.githubusercontent.com/FoxoTech/methylprep/blob/master/.readthedocs.yaml
LICENSEhttps://patch-diff.githubusercontent.com/FoxoTech/methylprep/blob/master/LICENSE
LICENSEhttps://patch-diff.githubusercontent.com/FoxoTech/methylprep/blob/master/LICENSE
Pipfilehttps://patch-diff.githubusercontent.com/FoxoTech/methylprep/blob/master/Pipfile
Pipfilehttps://patch-diff.githubusercontent.com/FoxoTech/methylprep/blob/master/Pipfile
Pipfile.lockhttps://patch-diff.githubusercontent.com/FoxoTech/methylprep/blob/master/Pipfile.lock
Pipfile.lockhttps://patch-diff.githubusercontent.com/FoxoTech/methylprep/blob/master/Pipfile.lock
README.mdhttps://patch-diff.githubusercontent.com/FoxoTech/methylprep/blob/master/README.md
README.mdhttps://patch-diff.githubusercontent.com/FoxoTech/methylprep/blob/master/README.md
conf.pyhttps://patch-diff.githubusercontent.com/FoxoTech/methylprep/blob/master/conf.py
conf.pyhttps://patch-diff.githubusercontent.com/FoxoTech/methylprep/blob/master/conf.py
index.rsthttps://patch-diff.githubusercontent.com/FoxoTech/methylprep/blob/master/index.rst
index.rsthttps://patch-diff.githubusercontent.com/FoxoTech/methylprep/blob/master/index.rst
requirements.txthttps://patch-diff.githubusercontent.com/FoxoTech/methylprep/blob/master/requirements.txt
requirements.txthttps://patch-diff.githubusercontent.com/FoxoTech/methylprep/blob/master/requirements.txt
setup.cfghttps://patch-diff.githubusercontent.com/FoxoTech/methylprep/blob/master/setup.cfg
setup.cfghttps://patch-diff.githubusercontent.com/FoxoTech/methylprep/blob/master/setup.cfg
setup.pyhttps://patch-diff.githubusercontent.com/FoxoTech/methylprep/blob/master/setup.py
setup.pyhttps://patch-diff.githubusercontent.com/FoxoTech/methylprep/blob/master/setup.py
READMEhttps://patch-diff.githubusercontent.com/FoxoTech/methylprep
MIT licensehttps://patch-diff.githubusercontent.com/FoxoTech/methylprep
ReadTheDocs.https://life-epigenetics-methylprep.readthedocs-hosted.com/en/latest/
https://github.com/FoxoTech/methylprep/actions/workflows/ci.yml
https://life-epigenetics-methylprep.readthedocs-hosted.com/en/latest/
https://opensource.org/licenses/MIT
https://circleci.com/gh/FoxoTech/methylprep
https://www.codacy.com/gh/FoxoTech/methylprep/dashboard?utm_source=github.com&utm_medium=referral&utm_content=FoxoTech/methylprep&utm_campaign=Badge_Grade
https://coveralls.io/github/FoxoTech/methylprep
https://pypi.org/project/methylprep/
https://patch-diff.githubusercontent.com/FoxoTech/methylprep#methylprep-is-part-of-the-methylsuite
https://raw.githubusercontent.com/FoxoTech/methylprep/master/docs/methyl-suite.png
methylsuitehttps://pypi.org/project/methylsuite/
sesamehttps://bioconductor.org/packages/release/bioc/html/sesame.html
minfihttps://bioconductor.org/packages/release/bioc/html/minfi.html
https://patch-diff.githubusercontent.com/FoxoTech/methylprep#methylsuite-package-components
https://patch-diff.githubusercontent.com/FoxoTech/methylprep#installation
pipenvhttps://pipenv.readthedocs.io/en/latest/
piphttps://pip.pypa.io/en/stable/
https://patch-diff.githubusercontent.com/FoxoTech/methylprep#tutorials-and-guides
this introductionhttps://patch-diff.githubusercontent.com/FoxoTech/methylprep/blob/master/docs/introduction/introduction.md
your own methylation datahttps://patch-diff.githubusercontent.com/FoxoTech/methylprep/blob/master/docs/general_walkthrough.md#processing-your-own-data
unprocessed datahttps://patch-diff.githubusercontent.com/FoxoTech/methylprep/blob/master/docs/general_walkthrough.md#downloading-from-geo
preprocessed datahttps://patch-diff.githubusercontent.com/FoxoTech/methylprep/blob/master/docs/special_cases.md#using-beta-bake-for-preprocessed-data
using control sampleshttps://patch-diff.githubusercontent.com/FoxoTech/methylprep/blob/master/docs/special_cases.md#building-a-composite-dataset-using-meta-data
with any keyword you choosehttps://patch-diff.githubusercontent.com/FoxoTech/methylprep/blob/master/docs/special_cases.md#building-a-composite-dataset-with-alert-and-composite
methylation https://patch-diff.githubusercontent.com/topics/methylation
epigenetics https://patch-diff.githubusercontent.com/topics/epigenetics
Readme https://patch-diff.githubusercontent.com/FoxoTech/methylprep#readme-ov-file
MIT license https://patch-diff.githubusercontent.com/FoxoTech/methylprep#MIT-1-ov-file
Please reload this pagehttps://patch-diff.githubusercontent.com/FoxoTech/methylprep
Activityhttps://patch-diff.githubusercontent.com/FoxoTech/methylprep/activity
Custom propertieshttps://patch-diff.githubusercontent.com/FoxoTech/methylprep/custom-properties
42 starshttps://patch-diff.githubusercontent.com/FoxoTech/methylprep/stargazers
5 watchinghttps://patch-diff.githubusercontent.com/FoxoTech/methylprep/watchers
15 forkshttps://patch-diff.githubusercontent.com/FoxoTech/methylprep/forks
Report repository https://patch-diff.githubusercontent.com/contact/report-content?content_url=https%3A%2F%2Fgithub.com%2FFoxoTech%2Fmethylprep&report=FoxoTech+%28user%29
Releases 5https://patch-diff.githubusercontent.com/FoxoTech/methylprep/releases
v1.7.0 100% sesame/minfi comptable and works with parquet format Latest Jul 14, 2022 https://patch-diff.githubusercontent.com/FoxoTech/methylprep/releases/tag/v1.7.0
+ 4 releaseshttps://patch-diff.githubusercontent.com/FoxoTech/methylprep/releases
Packages 0https://patch-diff.githubusercontent.com/orgs/FoxoTech/packages?repo_name=methylprep
Please reload this pagehttps://patch-diff.githubusercontent.com/FoxoTech/methylprep
Contributors 6https://patch-diff.githubusercontent.com/FoxoTech/methylprep/graphs/contributors
Please reload this pagehttps://patch-diff.githubusercontent.com/FoxoTech/methylprep
Python 99.4% https://patch-diff.githubusercontent.com/FoxoTech/methylprep/search?l=python
R 0.6% https://patch-diff.githubusercontent.com/FoxoTech/methylprep/search?l=r
https://github.com
Termshttps://docs.github.com/site-policy/github-terms/github-terms-of-service
Privacyhttps://docs.github.com/site-policy/privacy-policies/github-privacy-statement
Securityhttps://github.com/security
Statushttps://www.githubstatus.com/
Communityhttps://github.community/
Docshttps://docs.github.com/
Contacthttps://support.github.com?tags=dotcom-footer

Viewport: width=device-width


URLs of crawlers that visited me.