René's URL Explorer Experiment


Title: GitHub - DeepGraphLearning/scCello: [NeurIPS 2024 Spotlight] A cell-ontology guided transcriptome foundation model

Open Graph Title: GitHub - DeepGraphLearning/scCello: [NeurIPS 2024 Spotlight] A cell-ontology guided transcriptome foundation model

X Title: GitHub - DeepGraphLearning/scCello: [NeurIPS 2024 Spotlight] A cell-ontology guided transcriptome foundation model

Description: [NeurIPS 2024 Spotlight] A cell-ontology guided transcriptome foundation model - DeepGraphLearning/scCello

Open Graph Description: [NeurIPS 2024 Spotlight] A cell-ontology guided transcriptome foundation model - DeepGraphLearning/scCello

X Description: [NeurIPS 2024 Spotlight] A cell-ontology guided transcriptome foundation model - DeepGraphLearning/scCello

Opengraph URL: https://github.com/DeepGraphLearning/scCello

X: @github

direct link

Domain: patch-diff.githubusercontent.com

route-pattern/:user_id/:repository
route-controllerfiles
route-actiondisambiguate
fetch-noncev2:a853b9a3-3b6c-ca85-c3b4-1eb7f7234f60
current-catalog-service-hashf3abb0cc802f3d7b95fc8762b94bdcb13bf39634c40c357301c4aa1d67a256fb
request-id902E:1B1778:118B455:181AC72:6971DE84
html-safe-noncef49aede2ba858f5c752d9d5cca53eef1dbd0280b6b610232a0140eb7fdc3bfcf
visitor-payloadeyJyZWZlcnJlciI6IiIsInJlcXVlc3RfaWQiOiI5MDJFOjFCMTc3ODoxMThCNDU1OjE4MUFDNzI6Njk3MURFODQiLCJ2aXNpdG9yX2lkIjoiNjIwMjQ4NzUxOTQ2Mzk4ODg2OCIsInJlZ2lvbl9lZGdlIjoiaWFkIiwicmVnaW9uX3JlbmRlciI6ImlhZCJ9
visitor-hmac2dfd044ef464852ade58c3a17fd4f3bc5a4e498658fd6a0a5e842f4004216c1a
hovercard-subject-tagrepository:880418018
github-keyboard-shortcutsrepository,copilot
google-site-verificationApib7-x98H0j5cPqHWwSMm6dNU4GmODRoqxLiDzdx9I
octolytics-urlhttps://collector.github.com/github/collect
analytics-location//
fb:app_id1401488693436528
apple-itunes-appapp-id=1477376905, app-argument=https://github.com/DeepGraphLearning/scCello
twitter:imagehttps://opengraph.githubassets.com/bec03f802133048893c238351eebde90a1973926fface41a95dd0a90d7f41aef/DeepGraphLearning/scCello
twitter:cardsummary_large_image
og:imagehttps://opengraph.githubassets.com/bec03f802133048893c238351eebde90a1973926fface41a95dd0a90d7f41aef/DeepGraphLearning/scCello
og:image:alt[NeurIPS 2024 Spotlight] A cell-ontology guided transcriptome foundation model - DeepGraphLearning/scCello
og:image:width1200
og:image:height600
og:site_nameGitHub
og:typeobject
hostnamegithub.com
expected-hostnamegithub.com
None683712716975b3393656edf09255a1d488d0e68ab7b9ac97e40ecf40036f696c
turbo-cache-controlno-preview
go-importgithub.com/DeepGraphLearning/scCello git https://github.com/DeepGraphLearning/scCello.git
octolytics-dimension-user_id38018154
octolytics-dimension-user_loginDeepGraphLearning
octolytics-dimension-repository_id880418018
octolytics-dimension-repository_nwoDeepGraphLearning/scCello
octolytics-dimension-repository_publictrue
octolytics-dimension-repository_is_forkfalse
octolytics-dimension-repository_network_root_id880418018
octolytics-dimension-repository_network_root_nwoDeepGraphLearning/scCello
turbo-body-classeslogged-out env-production page-responsive
disable-turbofalse
browser-stats-urlhttps://api.github.com/_private/browser/stats
browser-errors-urlhttps://api.github.com/_private/browser/errors
releaseed99da4e2de688dd1056894c1eccd4c82c6bbbfe
ui-targetfull
theme-color#1e2327
color-schemelight dark

Links:

Skip to contenthttps://patch-diff.githubusercontent.com/DeepGraphLearning/scCello#start-of-content
https://patch-diff.githubusercontent.com/
Sign in https://patch-diff.githubusercontent.com/login?return_to=https%3A%2F%2Fgithub.com%2FDeepGraphLearning%2FscCello
GitHub CopilotWrite better code with AIhttps://github.com/features/copilot
GitHub SparkBuild and deploy intelligent appshttps://github.com/features/spark
GitHub ModelsManage and compare promptshttps://github.com/features/models
MCP RegistryNewIntegrate external toolshttps://github.com/mcp
ActionsAutomate any workflowhttps://github.com/features/actions
CodespacesInstant dev environmentshttps://github.com/features/codespaces
IssuesPlan and track workhttps://github.com/features/issues
Code ReviewManage code changeshttps://github.com/features/code-review
GitHub Advanced SecurityFind and fix vulnerabilitieshttps://github.com/security/advanced-security
Code securitySecure your code as you buildhttps://github.com/security/advanced-security/code-security
Secret protectionStop leaks before they starthttps://github.com/security/advanced-security/secret-protection
Why GitHubhttps://github.com/why-github
Documentationhttps://docs.github.com
Bloghttps://github.blog
Changeloghttps://github.blog/changelog
Marketplacehttps://github.com/marketplace
View all featureshttps://github.com/features
Enterpriseshttps://github.com/enterprise
Small and medium teamshttps://github.com/team
Startupshttps://github.com/enterprise/startups
Nonprofitshttps://github.com/solutions/industry/nonprofits
App Modernizationhttps://github.com/solutions/use-case/app-modernization
DevSecOpshttps://github.com/solutions/use-case/devsecops
DevOpshttps://github.com/solutions/use-case/devops
CI/CDhttps://github.com/solutions/use-case/ci-cd
View all use caseshttps://github.com/solutions/use-case
Healthcarehttps://github.com/solutions/industry/healthcare
Financial serviceshttps://github.com/solutions/industry/financial-services
Manufacturinghttps://github.com/solutions/industry/manufacturing
Governmenthttps://github.com/solutions/industry/government
View all industrieshttps://github.com/solutions/industry
View all solutionshttps://github.com/solutions
AIhttps://github.com/resources/articles?topic=ai
Software Developmenthttps://github.com/resources/articles?topic=software-development
DevOpshttps://github.com/resources/articles?topic=devops
Securityhttps://github.com/resources/articles?topic=security
View all topicshttps://github.com/resources/articles
Customer storieshttps://github.com/customer-stories
Events & webinarshttps://github.com/resources/events
Ebooks & reportshttps://github.com/resources/whitepapers
Business insightshttps://github.com/solutions/executive-insights
GitHub Skillshttps://skills.github.com
Documentationhttps://docs.github.com
Customer supporthttps://support.github.com
Community forumhttps://github.com/orgs/community/discussions
Trust centerhttps://github.com/trust-center
Partnershttps://github.com/partners
GitHub SponsorsFund open source developershttps://github.com/sponsors
Security Labhttps://securitylab.github.com
Maintainer Communityhttps://maintainers.github.com
Acceleratorhttps://github.com/accelerator
Archive Programhttps://archiveprogram.github.com
Topicshttps://github.com/topics
Trendinghttps://github.com/trending
Collectionshttps://github.com/collections
Enterprise platformAI-powered developer platformhttps://github.com/enterprise
GitHub Advanced SecurityEnterprise-grade security featureshttps://github.com/security/advanced-security
Copilot for BusinessEnterprise-grade AI featureshttps://github.com/features/copilot/copilot-business
Premium SupportEnterprise-grade 24/7 supporthttps://github.com/premium-support
Pricinghttps://github.com/pricing
Search syntax tipshttps://docs.github.com/search-github/github-code-search/understanding-github-code-search-syntax
documentationhttps://docs.github.com/search-github/github-code-search/understanding-github-code-search-syntax
Sign in https://patch-diff.githubusercontent.com/login?return_to=https%3A%2F%2Fgithub.com%2FDeepGraphLearning%2FscCello
Sign up https://patch-diff.githubusercontent.com/signup?ref_cta=Sign+up&ref_loc=header+logged+out&ref_page=%2F%3Cuser-name%3E%2F%3Crepo-name%3E&source=header-repo&source_repo=DeepGraphLearning%2FscCello
Reloadhttps://patch-diff.githubusercontent.com/DeepGraphLearning/scCello
Reloadhttps://patch-diff.githubusercontent.com/DeepGraphLearning/scCello
Reloadhttps://patch-diff.githubusercontent.com/DeepGraphLearning/scCello
DeepGraphLearning https://patch-diff.githubusercontent.com/DeepGraphLearning
scCellohttps://patch-diff.githubusercontent.com/DeepGraphLearning/scCello
Notifications https://patch-diff.githubusercontent.com/login?return_to=%2FDeepGraphLearning%2FscCello
Fork 5 https://patch-diff.githubusercontent.com/login?return_to=%2FDeepGraphLearning%2FscCello
Star 21 https://patch-diff.githubusercontent.com/login?return_to=%2FDeepGraphLearning%2FscCello
21 stars https://patch-diff.githubusercontent.com/DeepGraphLearning/scCello/stargazers
5 forks https://patch-diff.githubusercontent.com/DeepGraphLearning/scCello/forks
Branches https://patch-diff.githubusercontent.com/DeepGraphLearning/scCello/branches
Tags https://patch-diff.githubusercontent.com/DeepGraphLearning/scCello/tags
Activity https://patch-diff.githubusercontent.com/DeepGraphLearning/scCello/activity
Star https://patch-diff.githubusercontent.com/login?return_to=%2FDeepGraphLearning%2FscCello
Notifications https://patch-diff.githubusercontent.com/login?return_to=%2FDeepGraphLearning%2FscCello
Code https://patch-diff.githubusercontent.com/DeepGraphLearning/scCello
Issues 1 https://patch-diff.githubusercontent.com/DeepGraphLearning/scCello/issues
Pull requests 1 https://patch-diff.githubusercontent.com/DeepGraphLearning/scCello/pulls
Actions https://patch-diff.githubusercontent.com/DeepGraphLearning/scCello/actions
Projects 0 https://patch-diff.githubusercontent.com/DeepGraphLearning/scCello/projects
Security Uh oh! There was an error while loading. Please reload this page. https://patch-diff.githubusercontent.com/DeepGraphLearning/scCello/security
Please reload this pagehttps://patch-diff.githubusercontent.com/DeepGraphLearning/scCello
Insights https://patch-diff.githubusercontent.com/DeepGraphLearning/scCello/pulse
Code https://patch-diff.githubusercontent.com/DeepGraphLearning/scCello
Issues https://patch-diff.githubusercontent.com/DeepGraphLearning/scCello/issues
Pull requests https://patch-diff.githubusercontent.com/DeepGraphLearning/scCello/pulls
Actions https://patch-diff.githubusercontent.com/DeepGraphLearning/scCello/actions
Projects https://patch-diff.githubusercontent.com/DeepGraphLearning/scCello/projects
Security https://patch-diff.githubusercontent.com/DeepGraphLearning/scCello/security
Insights https://patch-diff.githubusercontent.com/DeepGraphLearning/scCello/pulse
Brancheshttps://patch-diff.githubusercontent.com/DeepGraphLearning/scCello/branches
Tagshttps://patch-diff.githubusercontent.com/DeepGraphLearning/scCello/tags
https://patch-diff.githubusercontent.com/DeepGraphLearning/scCello/branches
https://patch-diff.githubusercontent.com/DeepGraphLearning/scCello/tags
4 Commitshttps://patch-diff.githubusercontent.com/DeepGraphLearning/scCello/commits/main/
https://patch-diff.githubusercontent.com/DeepGraphLearning/scCello/commits/main/
assethttps://patch-diff.githubusercontent.com/DeepGraphLearning/scCello/tree/main/asset
assethttps://patch-diff.githubusercontent.com/DeepGraphLearning/scCello/tree/main/asset
datahttps://patch-diff.githubusercontent.com/DeepGraphLearning/scCello/tree/main/data
datahttps://patch-diff.githubusercontent.com/DeepGraphLearning/scCello/tree/main/data
sccellohttps://patch-diff.githubusercontent.com/DeepGraphLearning/scCello/tree/main/sccello
sccellohttps://patch-diff.githubusercontent.com/DeepGraphLearning/scCello/tree/main/sccello
README.mdhttps://patch-diff.githubusercontent.com/DeepGraphLearning/scCello/blob/main/README.md
README.mdhttps://patch-diff.githubusercontent.com/DeepGraphLearning/scCello/blob/main/README.md
READMEhttps://patch-diff.githubusercontent.com/DeepGraphLearning/scCello
https://patch-diff.githubusercontent.com/DeepGraphLearning/scCello#sccello-cell-ontology-guided-transcriptome-foundation-model
https://pytorch.org/get-started/locally/
https://arxiv.org/abs/2408.12373
https://huggingface.co/collections/katarinayuan/sccello-67a01b6841f3658ba443c58a
https://camo.githubusercontent.com/d391a3bdb308a85564f116e6219cb74dcfd7830d8f8fc798b42fce6c2e6bed6f/68747470733a2f2f696d672e736869656c64732e696f2f62616467652f4c6963656e73652d4d49542d677265656e2e7376673f6c6162656c436f6c6f723d67726179
scCellohttps://github.com/DeepGraphLearning/scCello
Xinyu Yuanhttps://github.com/KatarinaYuan
Zhihao Zhanhttps://github.com/zhan8855
https://patch-diff.githubusercontent.com/DeepGraphLearning/scCello#overview
https://patch-diff.githubusercontent.com/DeepGraphLearning/scCello/blob/main/asset/main_method_sccello.png
Featureshttps://patch-diff.githubusercontent.com/DeepGraphLearning/scCello#features
Updateshttps://patch-diff.githubusercontent.com/DeepGraphLearning/scCello#updates
Installationhttps://patch-diff.githubusercontent.com/DeepGraphLearning/scCello#installation
Downloadhttps://patch-diff.githubusercontent.com/DeepGraphLearning/scCello#download
Model checkpointshttps://patch-diff.githubusercontent.com/DeepGraphLearning/scCello#model-checkpoints
Pre-training and downstream datasetshttps://patch-diff.githubusercontent.com/DeepGraphLearning/scCello#pre-training-and-downstream-datasets
Example h5ad datahttps://patch-diff.githubusercontent.com/DeepGraphLearning/scCello#example-h5ad-data
Usagehttps://patch-diff.githubusercontent.com/DeepGraphLearning/scCello#usage
h5ad data format transformationhttps://patch-diff.githubusercontent.com/DeepGraphLearning/scCello#h5ad-data-format-transformation
Downstream generalizationhttps://patch-diff.githubusercontent.com/DeepGraphLearning/scCello#downstream-generalization
Cell type clustering & batch integrationhttps://patch-diff.githubusercontent.com/DeepGraphLearning/scCello#cell-type-clustering--batch-integration
Cell type classificationhttps://patch-diff.githubusercontent.com/DeepGraphLearning/scCello#cell-type-classification
Novel cell type classificationhttps://patch-diff.githubusercontent.com/DeepGraphLearning/scCello#novel-cell-type-classification
Downstream transferabilityhttps://patch-diff.githubusercontent.com/DeepGraphLearning/scCello#downstream-transferability
Marker gene predictionhttps://patch-diff.githubusercontent.com/DeepGraphLearning/scCello#marker-gene-prediction
Cancer drug response predictionhttps://patch-diff.githubusercontent.com/DeepGraphLearning/scCello#cancer-drug-response-prediction
Pre-traininghttps://patch-diff.githubusercontent.com/DeepGraphLearning/scCello#pre-training
Citationhttps://patch-diff.githubusercontent.com/DeepGraphLearning/scCello#citation
https://patch-diff.githubusercontent.com/DeepGraphLearning/scCello#features
https://patch-diff.githubusercontent.com/DeepGraphLearning/scCello#updates
https://patch-diff.githubusercontent.com/DeepGraphLearning/scCello#installation
https://patch-diff.githubusercontent.com/DeepGraphLearning/scCello#download
https://patch-diff.githubusercontent.com/DeepGraphLearning/scCello#model-checkpoints
https://patch-diff.githubusercontent.com/DeepGraphLearning/scCello#pre-training-and-downstream-datasets
https://patch-diff.githubusercontent.com/DeepGraphLearning/scCello#example-h5ad-data
CellxGenehttps://chanzuckerberg.github.io/cellxgene-census/
https://patch-diff.githubusercontent.com/DeepGraphLearning/scCello#usage
https://patch-diff.githubusercontent.com/DeepGraphLearning/scCello#h5ad-data-format-transformation
https://patch-diff.githubusercontent.com/DeepGraphLearning/scCello#downstream-generalization
https://patch-diff.githubusercontent.com/DeepGraphLearning/scCello#cell-type-clustering--batch-integration
https://patch-diff.githubusercontent.com/DeepGraphLearning/scCello#cell-type-classification
https://patch-diff.githubusercontent.com/DeepGraphLearning/scCello#novel-cell-type-classification
https://patch-diff.githubusercontent.com/DeepGraphLearning/scCello#downstream-transferability
https://patch-diff.githubusercontent.com/DeepGraphLearning/scCello#marker-gene-prediction
https://patch-diff.githubusercontent.com/DeepGraphLearning/scCello#cancer-drug-response-prediction
https://patch-diff.githubusercontent.com/DeepGraphLearning/scCello#pre-training
https://patch-diff.githubusercontent.com/DeepGraphLearning/scCello#citation
Readme https://patch-diff.githubusercontent.com/DeepGraphLearning/scCello#readme-ov-file
Please reload this pagehttps://patch-diff.githubusercontent.com/DeepGraphLearning/scCello
Activityhttps://patch-diff.githubusercontent.com/DeepGraphLearning/scCello/activity
Custom propertieshttps://patch-diff.githubusercontent.com/DeepGraphLearning/scCello/custom-properties
21 starshttps://patch-diff.githubusercontent.com/DeepGraphLearning/scCello/stargazers
2 watchinghttps://patch-diff.githubusercontent.com/DeepGraphLearning/scCello/watchers
5 forkshttps://patch-diff.githubusercontent.com/DeepGraphLearning/scCello/forks
Report repository https://patch-diff.githubusercontent.com/contact/report-content?content_url=https%3A%2F%2Fgithub.com%2FDeepGraphLearning%2FscCello&report=DeepGraphLearning+%28user%29
Releaseshttps://patch-diff.githubusercontent.com/DeepGraphLearning/scCello/releases
Packages 0https://patch-diff.githubusercontent.com/orgs/DeepGraphLearning/packages?repo_name=scCello
Python 100.0% https://patch-diff.githubusercontent.com/DeepGraphLearning/scCello/search?l=python
https://github.com
Termshttps://docs.github.com/site-policy/github-terms/github-terms-of-service
Privacyhttps://docs.github.com/site-policy/privacy-policies/github-privacy-statement
Securityhttps://github.com/security
Statushttps://www.githubstatus.com/
Communityhttps://github.community/
Docshttps://docs.github.com/
Contacthttps://support.github.com?tags=dotcom-footer

Viewport: width=device-width

URLs of crawlers that visited me.