René's URL Explorer Experiment


Title: GitHub - Data2Dynamics/d2d: a modeling environment tailored to parameter estimation in dynamical systems

Open Graph Title: GitHub - Data2Dynamics/d2d: a modeling environment tailored to parameter estimation in dynamical systems

X Title: GitHub - Data2Dynamics/d2d: a modeling environment tailored to parameter estimation in dynamical systems

Description: a modeling environment tailored to parameter estimation in dynamical systems - Data2Dynamics/d2d

Open Graph Description: a modeling environment tailored to parameter estimation in dynamical systems - Data2Dynamics/d2d

X Description: a modeling environment tailored to parameter estimation in dynamical systems - Data2Dynamics/d2d

Mail addresses
andreas.raue@uni-a.de

Opengraph URL: https://github.com/Data2Dynamics/d2d

X: @github

direct link

Domain: patch-diff.githubusercontent.com

route-pattern/:user_id/:repository
route-controllerfiles
route-actiondisambiguate
fetch-noncev2:a4b6b229-5d1c-9759-119c-cde187879b03
current-catalog-service-hashf3abb0cc802f3d7b95fc8762b94bdcb13bf39634c40c357301c4aa1d67a256fb
request-id86E6:3173F9:65E5581:88A1F64:698CB0CC
html-safe-nonce7546f36fc29457fa59c1638bf64d034a5101f456e515727efebd73207d2190ba
visitor-payloadeyJyZWZlcnJlciI6IiIsInJlcXVlc3RfaWQiOiI4NkU2OjMxNzNGOTo2NUU1NTgxOjg4QTFGNjQ6Njk4Q0IwQ0MiLCJ2aXNpdG9yX2lkIjoiMjM4MzQyMTcyMTA1Njk0ODQyOCIsInJlZ2lvbl9lZGdlIjoiaWFkIiwicmVnaW9uX3JlbmRlciI6ImlhZCJ9
visitor-hmac0b12278030bc56aa359d8d9724c1d16482e346ea6d85c75f360e833b88c9475d
hovercard-subject-tagrepository:61103027
github-keyboard-shortcutsrepository,copilot
google-site-verificationApib7-x98H0j5cPqHWwSMm6dNU4GmODRoqxLiDzdx9I
octolytics-urlhttps://collector.github.com/github/collect
analytics-location//
fb:app_id1401488693436528
apple-itunes-appapp-id=1477376905, app-argument=https://github.com/Data2Dynamics/d2d
twitter:imagehttps://opengraph.githubassets.com/a33921c96ddf3d3683eea5f79db529c433e9ef81c10aa60ac30a35137d8b72b9/Data2Dynamics/d2d
twitter:cardsummary_large_image
og:imagehttps://opengraph.githubassets.com/a33921c96ddf3d3683eea5f79db529c433e9ef81c10aa60ac30a35137d8b72b9/Data2Dynamics/d2d
og:image:alta modeling environment tailored to parameter estimation in dynamical systems - Data2Dynamics/d2d
og:image:width1200
og:image:height600
og:site_nameGitHub
og:typeobject
hostnamegithub.com
expected-hostnamegithub.com
None640eeb7b6ff4d8d106235d228c0c286e82592d4d2403227b5b2b4fc5832297a4
turbo-cache-controlno-preview
go-importgithub.com/Data2Dynamics/d2d git https://github.com/Data2Dynamics/d2d.git
octolytics-dimension-user_id19832531
octolytics-dimension-user_loginData2Dynamics
octolytics-dimension-repository_id61103027
octolytics-dimension-repository_nwoData2Dynamics/d2d
octolytics-dimension-repository_publictrue
octolytics-dimension-repository_is_forkfalse
octolytics-dimension-repository_network_root_id61103027
octolytics-dimension-repository_network_root_nwoData2Dynamics/d2d
turbo-body-classeslogged-out env-production page-responsive
disable-turbofalse
browser-stats-urlhttps://api.github.com/_private/browser/stats
browser-errors-urlhttps://api.github.com/_private/browser/errors
release3d444f0a47beeeac94cddbb51c91ab408befe8d4
ui-targetfull
theme-color#1e2327
color-schemelight dark

Links:

Skip to contenthttps://patch-diff.githubusercontent.com/Data2Dynamics/d2d#start-of-content
https://patch-diff.githubusercontent.com/
Sign in https://patch-diff.githubusercontent.com/login?return_to=https%3A%2F%2Fgithub.com%2FData2Dynamics%2Fd2d
GitHub CopilotWrite better code with AIhttps://github.com/features/copilot
GitHub SparkBuild and deploy intelligent appshttps://github.com/features/spark
GitHub ModelsManage and compare promptshttps://github.com/features/models
MCP RegistryNewIntegrate external toolshttps://github.com/mcp
ActionsAutomate any workflowhttps://github.com/features/actions
CodespacesInstant dev environmentshttps://github.com/features/codespaces
IssuesPlan and track workhttps://github.com/features/issues
Code ReviewManage code changeshttps://github.com/features/code-review
GitHub Advanced SecurityFind and fix vulnerabilitieshttps://github.com/security/advanced-security
Code securitySecure your code as you buildhttps://github.com/security/advanced-security/code-security
Secret protectionStop leaks before they starthttps://github.com/security/advanced-security/secret-protection
Why GitHubhttps://github.com/why-github
Documentationhttps://docs.github.com
Bloghttps://github.blog
Changeloghttps://github.blog/changelog
Marketplacehttps://github.com/marketplace
View all featureshttps://github.com/features
Enterpriseshttps://github.com/enterprise
Small and medium teamshttps://github.com/team
Startupshttps://github.com/enterprise/startups
Nonprofitshttps://github.com/solutions/industry/nonprofits
App Modernizationhttps://github.com/solutions/use-case/app-modernization
DevSecOpshttps://github.com/solutions/use-case/devsecops
DevOpshttps://github.com/solutions/use-case/devops
CI/CDhttps://github.com/solutions/use-case/ci-cd
View all use caseshttps://github.com/solutions/use-case
Healthcarehttps://github.com/solutions/industry/healthcare
Financial serviceshttps://github.com/solutions/industry/financial-services
Manufacturinghttps://github.com/solutions/industry/manufacturing
Governmenthttps://github.com/solutions/industry/government
View all industrieshttps://github.com/solutions/industry
View all solutionshttps://github.com/solutions
AIhttps://github.com/resources/articles?topic=ai
Software Developmenthttps://github.com/resources/articles?topic=software-development
DevOpshttps://github.com/resources/articles?topic=devops
Securityhttps://github.com/resources/articles?topic=security
View all topicshttps://github.com/resources/articles
Customer storieshttps://github.com/customer-stories
Events & webinarshttps://github.com/resources/events
Ebooks & reportshttps://github.com/resources/whitepapers
Business insightshttps://github.com/solutions/executive-insights
GitHub Skillshttps://skills.github.com
Documentationhttps://docs.github.com
Customer supporthttps://support.github.com
Community forumhttps://github.com/orgs/community/discussions
Trust centerhttps://github.com/trust-center
Partnershttps://github.com/partners
GitHub SponsorsFund open source developershttps://github.com/sponsors
Security Labhttps://securitylab.github.com
Maintainer Communityhttps://maintainers.github.com
Acceleratorhttps://github.com/accelerator
Archive Programhttps://archiveprogram.github.com
Topicshttps://github.com/topics
Trendinghttps://github.com/trending
Collectionshttps://github.com/collections
Enterprise platformAI-powered developer platformhttps://github.com/enterprise
GitHub Advanced SecurityEnterprise-grade security featureshttps://github.com/security/advanced-security
Copilot for BusinessEnterprise-grade AI featureshttps://github.com/features/copilot/copilot-business
Premium SupportEnterprise-grade 24/7 supporthttps://github.com/premium-support
Pricinghttps://github.com/pricing
Search syntax tipshttps://docs.github.com/search-github/github-code-search/understanding-github-code-search-syntax
documentationhttps://docs.github.com/search-github/github-code-search/understanding-github-code-search-syntax
Sign in https://patch-diff.githubusercontent.com/login?return_to=https%3A%2F%2Fgithub.com%2FData2Dynamics%2Fd2d
Sign up https://patch-diff.githubusercontent.com/signup?ref_cta=Sign+up&ref_loc=header+logged+out&ref_page=%2F%3Cuser-name%3E%2F%3Crepo-name%3E&source=header-repo&source_repo=Data2Dynamics%2Fd2d
Reloadhttps://patch-diff.githubusercontent.com/Data2Dynamics/d2d
Reloadhttps://patch-diff.githubusercontent.com/Data2Dynamics/d2d
Reloadhttps://patch-diff.githubusercontent.com/Data2Dynamics/d2d
Data2Dynamics https://patch-diff.githubusercontent.com/Data2Dynamics
d2dhttps://patch-diff.githubusercontent.com/Data2Dynamics/d2d
Notifications https://patch-diff.githubusercontent.com/login?return_to=%2FData2Dynamics%2Fd2d
Fork 29 https://patch-diff.githubusercontent.com/login?return_to=%2FData2Dynamics%2Fd2d
Star 65 https://patch-diff.githubusercontent.com/login?return_to=%2FData2Dynamics%2Fd2d
github.com/Data2Dynamics/d2dhttps://github.com/Data2Dynamics/d2d
65 stars https://patch-diff.githubusercontent.com/Data2Dynamics/d2d/stargazers
29 forks https://patch-diff.githubusercontent.com/Data2Dynamics/d2d/forks
Branches https://patch-diff.githubusercontent.com/Data2Dynamics/d2d/branches
Tags https://patch-diff.githubusercontent.com/Data2Dynamics/d2d/tags
Activity https://patch-diff.githubusercontent.com/Data2Dynamics/d2d/activity
Star https://patch-diff.githubusercontent.com/login?return_to=%2FData2Dynamics%2Fd2d
Notifications https://patch-diff.githubusercontent.com/login?return_to=%2FData2Dynamics%2Fd2d
Code https://patch-diff.githubusercontent.com/Data2Dynamics/d2d
Issues 13 https://patch-diff.githubusercontent.com/Data2Dynamics/d2d/issues
Pull requests 2 https://patch-diff.githubusercontent.com/Data2Dynamics/d2d/pulls
Actions https://patch-diff.githubusercontent.com/Data2Dynamics/d2d/actions
Projects 0 https://patch-diff.githubusercontent.com/Data2Dynamics/d2d/projects
Wiki https://patch-diff.githubusercontent.com/Data2Dynamics/d2d/wiki
Security 0 https://patch-diff.githubusercontent.com/Data2Dynamics/d2d/security
Insights https://patch-diff.githubusercontent.com/Data2Dynamics/d2d/pulse
Code https://patch-diff.githubusercontent.com/Data2Dynamics/d2d
Issues https://patch-diff.githubusercontent.com/Data2Dynamics/d2d/issues
Pull requests https://patch-diff.githubusercontent.com/Data2Dynamics/d2d/pulls
Actions https://patch-diff.githubusercontent.com/Data2Dynamics/d2d/actions
Projects https://patch-diff.githubusercontent.com/Data2Dynamics/d2d/projects
Wiki https://patch-diff.githubusercontent.com/Data2Dynamics/d2d/wiki
Security https://patch-diff.githubusercontent.com/Data2Dynamics/d2d/security
Insights https://patch-diff.githubusercontent.com/Data2Dynamics/d2d/pulse
Brancheshttps://patch-diff.githubusercontent.com/Data2Dynamics/d2d/branches
Tagshttps://patch-diff.githubusercontent.com/Data2Dynamics/d2d/tags
https://patch-diff.githubusercontent.com/Data2Dynamics/d2d/branches
https://patch-diff.githubusercontent.com/Data2Dynamics/d2d/tags
3,191 Commitshttps://patch-diff.githubusercontent.com/Data2Dynamics/d2d/commits/master/
https://patch-diff.githubusercontent.com/Data2Dynamics/d2d/commits/master/
arFramework3https://patch-diff.githubusercontent.com/Data2Dynamics/d2d/tree/master/arFramework3
arFramework3https://patch-diff.githubusercontent.com/Data2Dynamics/d2d/tree/master/arFramework3
.gitignorehttps://patch-diff.githubusercontent.com/Data2Dynamics/d2d/blob/master/.gitignore
.gitignorehttps://patch-diff.githubusercontent.com/Data2Dynamics/d2d/blob/master/.gitignore
.gitmoduleshttps://patch-diff.githubusercontent.com/Data2Dynamics/d2d/blob/master/.gitmodules
.gitmoduleshttps://patch-diff.githubusercontent.com/Data2Dynamics/d2d/blob/master/.gitmodules
.mailmaphttps://patch-diff.githubusercontent.com/Data2Dynamics/d2d/blob/master/.mailmap
.mailmaphttps://patch-diff.githubusercontent.com/Data2Dynamics/d2d/blob/master/.mailmap
README.mdhttps://patch-diff.githubusercontent.com/Data2Dynamics/d2d/blob/master/README.md
README.mdhttps://patch-diff.githubusercontent.com/Data2Dynamics/d2d/blob/master/README.md
_config.ymlhttps://patch-diff.githubusercontent.com/Data2Dynamics/d2d/blob/master/_config.yml
_config.ymlhttps://patch-diff.githubusercontent.com/Data2Dynamics/d2d/blob/master/_config.yml
index.mdhttps://patch-diff.githubusercontent.com/Data2Dynamics/d2d/blob/master/index.md
index.mdhttps://patch-diff.githubusercontent.com/Data2Dynamics/d2d/blob/master/index.md
READMEhttps://patch-diff.githubusercontent.com/Data2Dynamics/d2d
https://patch-diff.githubusercontent.com/Data2Dynamics/d2d#data2dynamics-software
Data2Dynamics: a modeling environment tailored to parameter estimation in dynamical systems.https://academic.oup.com/bioinformatics/article/31/21/3558/195191
Lessons Learned from Quantitative Dynamical Modeling in Systems Biology.http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0074335
YouTube Videohttp://www.youtube.com/watch?v=_aAtSo_xe7I
Bachmann et al. 2011https://github.com/Data2Dynamics/d2d/wiki/Bachmann_MSB2011
https://patch-diff.githubusercontent.com/Data2Dynamics/d2d#features
read morehttps://github.com/Data2Dynamics/d2d/wiki/Input-estimation
read morehttps://github.com/Data2Dynamics/d2d/wiki/Uncertainty-analysis
read morehttps://github.com/Data2Dynamics/d2d/wiki/Parallelization
read morehttps://github.com/Data2Dynamics/d2d/wiki/L1-regularization
features pagehttps://github.com/Data2Dynamics/d2d/wiki/Features
Wikihttps://github.com/Data2Dynamics/d2d/wiki/Home
https://patch-diff.githubusercontent.com/Data2Dynamics/d2d#awards
DREAMhttps://dreamchallenges.org/
DREAM6https://dreamchallenges.org/dream-6-estimation-of-model-parameters-challenge/
DREAM7https://dreamchallenges.org/dream-7-network-topology-and-parameter-inference-challenge/
Experimental Design for Parameter Estimation of Gene Regulatory Networkshttp://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0040052
https://patch-diff.githubusercontent.com/Data2Dynamics/d2d#further-topics
Wikihttps://github.com/Data2Dynamics/d2d/wiki/Home/
https://patch-diff.githubusercontent.com/Data2Dynamics/d2d#installation
Wikihttps://github.com/Data2Dynamics/d2d/wiki/Installation
https://patch-diff.githubusercontent.com/Data2Dynamics/d2d#copyright-notice
Copyright text and third party software license information.https://github.com/Data2Dynamics/d2d/wiki/Copyright
github.com/Data2Dynamics/d2dhttps://github.com/Data2Dynamics/d2d
matlab https://patch-diff.githubusercontent.com/topics/matlab
modeling https://patch-diff.githubusercontent.com/topics/modeling
systems-biology https://patch-diff.githubusercontent.com/topics/systems-biology
computational-biology https://patch-diff.githubusercontent.com/topics/computational-biology
parameter-estimation https://patch-diff.githubusercontent.com/topics/parameter-estimation
model-calibration https://patch-diff.githubusercontent.com/topics/model-calibration
Readme https://patch-diff.githubusercontent.com/Data2Dynamics/d2d#readme-ov-file
Please reload this pagehttps://patch-diff.githubusercontent.com/Data2Dynamics/d2d
Activityhttps://patch-diff.githubusercontent.com/Data2Dynamics/d2d/activity
Custom propertieshttps://patch-diff.githubusercontent.com/Data2Dynamics/d2d/custom-properties
65 starshttps://patch-diff.githubusercontent.com/Data2Dynamics/d2d/stargazers
26 watchinghttps://patch-diff.githubusercontent.com/Data2Dynamics/d2d/watchers
29 forkshttps://patch-diff.githubusercontent.com/Data2Dynamics/d2d/forks
Report repository https://patch-diff.githubusercontent.com/contact/report-content?content_url=https%3A%2F%2Fgithub.com%2FData2Dynamics%2Fd2d&report=Data2Dynamics+%28user%29
Releaseshttps://patch-diff.githubusercontent.com/Data2Dynamics/d2d/releases
33 tags https://patch-diff.githubusercontent.com/Data2Dynamics/d2d/tags
Packages 0https://patch-diff.githubusercontent.com/orgs/Data2Dynamics/packages?repo_name=d2d
Please reload this pagehttps://patch-diff.githubusercontent.com/Data2Dynamics/d2d
Contributors 30https://patch-diff.githubusercontent.com/Data2Dynamics/d2d/graphs/contributors
Please reload this pagehttps://patch-diff.githubusercontent.com/Data2Dynamics/d2d
+ 16 contributorshttps://patch-diff.githubusercontent.com/Data2Dynamics/d2d/graphs/contributors
MATLAB 88.0% https://patch-diff.githubusercontent.com/Data2Dynamics/d2d/search?l=matlab
C 5.6% https://patch-diff.githubusercontent.com/Data2Dynamics/d2d/search?l=c
TeX 3.1% https://patch-diff.githubusercontent.com/Data2Dynamics/d2d/search?l=tex
Python 1.5% https://patch-diff.githubusercontent.com/Data2Dynamics/d2d/search?l=python
JavaScript 1.2% https://patch-diff.githubusercontent.com/Data2Dynamics/d2d/search?l=javascript
HTML 0.5% https://patch-diff.githubusercontent.com/Data2Dynamics/d2d/search?l=html
https://github.com
Termshttps://docs.github.com/site-policy/github-terms/github-terms-of-service
Privacyhttps://docs.github.com/site-policy/privacy-policies/github-privacy-statement
Securityhttps://github.com/security
Statushttps://www.githubstatus.com/
Communityhttps://github.community/
Docshttps://docs.github.com/
Contacthttps://support.github.com?tags=dotcom-footer

Viewport: width=device-width


URLs of crawlers that visited me.