René's URL Explorer Experiment


Title: GitHub - CostaLab/scopen: scOpen: single-cell open chromatin analysis via NMF modelling

Open Graph Title: GitHub - CostaLab/scopen: scOpen: single-cell open chromatin analysis via NMF modelling

X Title: GitHub - CostaLab/scopen: scOpen: single-cell open chromatin analysis via NMF modelling

Description: scOpen: single-cell open chromatin analysis via NMF modelling - CostaLab/scopen

Open Graph Description: scOpen: single-cell open chromatin analysis via NMF modelling - CostaLab/scopen

X Description: scOpen: single-cell open chromatin analysis via NMF modelling - CostaLab/scopen

Opengraph URL: https://github.com/CostaLab/scopen

X: @github

direct link

Domain: patch-diff.githubusercontent.com

route-pattern/:user_id/:repository
route-controllerfiles
route-actiondisambiguate
fetch-noncev2:a83ddf8c-9d09-858a-8a73-68c8c8f76048
current-catalog-service-hashf3abb0cc802f3d7b95fc8762b94bdcb13bf39634c40c357301c4aa1d67a256fb
request-idC800:1931FB:BB30873:F90977C:698C5E7F
html-safe-nonce65259cd2266e16f2cbae1a0b36f5c6890c455936ea9285c15defa042de2ded28
visitor-payloadeyJyZWZlcnJlciI6IiIsInJlcXVlc3RfaWQiOiJDODAwOjE5MzFGQjpCQjMwODczOkY5MDk3N0M6Njk4QzVFN0YiLCJ2aXNpdG9yX2lkIjoiNDc0Mzc5NjY2NzMwNzU0ODI4NyIsInJlZ2lvbl9lZGdlIjoiaWFkIiwicmVnaW9uX3JlbmRlciI6ImlhZCJ9
visitor-hmac2ab9aa79a98b7eb383711c5ee561d837fc87f8cac384176d100137506d7cf429
hovercard-subject-tagrepository:220791591
github-keyboard-shortcutsrepository,copilot
google-site-verificationApib7-x98H0j5cPqHWwSMm6dNU4GmODRoqxLiDzdx9I
octolytics-urlhttps://collector.github.com/github/collect
analytics-location//
fb:app_id1401488693436528
apple-itunes-appapp-id=1477376905, app-argument=https://github.com/CostaLab/scopen
twitter:imagehttps://opengraph.githubassets.com/37192dc389151b2689c1fb1d4084e60bc4b89a87c048f945b1f1db0410514f39/CostaLab/scopen
twitter:cardsummary_large_image
og:imagehttps://opengraph.githubassets.com/37192dc389151b2689c1fb1d4084e60bc4b89a87c048f945b1f1db0410514f39/CostaLab/scopen
og:image:altscOpen: single-cell open chromatin analysis via NMF modelling - CostaLab/scopen
og:image:width1200
og:image:height600
og:site_nameGitHub
og:typeobject
hostnamegithub.com
expected-hostnamegithub.com
None640eeb7b6ff4d8d106235d228c0c286e82592d4d2403227b5b2b4fc5832297a4
turbo-cache-controlno-preview
go-importgithub.com/CostaLab/scopen git https://github.com/CostaLab/scopen.git
octolytics-dimension-user_id17779082
octolytics-dimension-user_loginCostaLab
octolytics-dimension-repository_id220791591
octolytics-dimension-repository_nwoCostaLab/scopen
octolytics-dimension-repository_publictrue
octolytics-dimension-repository_is_forkfalse
octolytics-dimension-repository_network_root_id220791591
octolytics-dimension-repository_network_root_nwoCostaLab/scopen
turbo-body-classeslogged-out env-production page-responsive
disable-turbofalse
browser-stats-urlhttps://api.github.com/_private/browser/stats
browser-errors-urlhttps://api.github.com/_private/browser/errors
release3d444f0a47beeeac94cddbb51c91ab408befe8d4
ui-targetfull
theme-color#1e2327
color-schemelight dark

Links:

Skip to contenthttps://patch-diff.githubusercontent.com/CostaLab/scopen#start-of-content
https://patch-diff.githubusercontent.com/
Sign in https://patch-diff.githubusercontent.com/login?return_to=https%3A%2F%2Fgithub.com%2FCostaLab%2Fscopen
GitHub CopilotWrite better code with AIhttps://github.com/features/copilot
GitHub SparkBuild and deploy intelligent appshttps://github.com/features/spark
GitHub ModelsManage and compare promptshttps://github.com/features/models
MCP RegistryNewIntegrate external toolshttps://github.com/mcp
ActionsAutomate any workflowhttps://github.com/features/actions
CodespacesInstant dev environmentshttps://github.com/features/codespaces
IssuesPlan and track workhttps://github.com/features/issues
Code ReviewManage code changeshttps://github.com/features/code-review
GitHub Advanced SecurityFind and fix vulnerabilitieshttps://github.com/security/advanced-security
Code securitySecure your code as you buildhttps://github.com/security/advanced-security/code-security
Secret protectionStop leaks before they starthttps://github.com/security/advanced-security/secret-protection
Why GitHubhttps://github.com/why-github
Documentationhttps://docs.github.com
Bloghttps://github.blog
Changeloghttps://github.blog/changelog
Marketplacehttps://github.com/marketplace
View all featureshttps://github.com/features
Enterpriseshttps://github.com/enterprise
Small and medium teamshttps://github.com/team
Startupshttps://github.com/enterprise/startups
Nonprofitshttps://github.com/solutions/industry/nonprofits
App Modernizationhttps://github.com/solutions/use-case/app-modernization
DevSecOpshttps://github.com/solutions/use-case/devsecops
DevOpshttps://github.com/solutions/use-case/devops
CI/CDhttps://github.com/solutions/use-case/ci-cd
View all use caseshttps://github.com/solutions/use-case
Healthcarehttps://github.com/solutions/industry/healthcare
Financial serviceshttps://github.com/solutions/industry/financial-services
Manufacturinghttps://github.com/solutions/industry/manufacturing
Governmenthttps://github.com/solutions/industry/government
View all industrieshttps://github.com/solutions/industry
View all solutionshttps://github.com/solutions
AIhttps://github.com/resources/articles?topic=ai
Software Developmenthttps://github.com/resources/articles?topic=software-development
DevOpshttps://github.com/resources/articles?topic=devops
Securityhttps://github.com/resources/articles?topic=security
View all topicshttps://github.com/resources/articles
Customer storieshttps://github.com/customer-stories
Events & webinarshttps://github.com/resources/events
Ebooks & reportshttps://github.com/resources/whitepapers
Business insightshttps://github.com/solutions/executive-insights
GitHub Skillshttps://skills.github.com
Documentationhttps://docs.github.com
Customer supporthttps://support.github.com
Community forumhttps://github.com/orgs/community/discussions
Trust centerhttps://github.com/trust-center
Partnershttps://github.com/partners
GitHub SponsorsFund open source developershttps://github.com/sponsors
Security Labhttps://securitylab.github.com
Maintainer Communityhttps://maintainers.github.com
Acceleratorhttps://github.com/accelerator
Archive Programhttps://archiveprogram.github.com
Topicshttps://github.com/topics
Trendinghttps://github.com/trending
Collectionshttps://github.com/collections
Enterprise platformAI-powered developer platformhttps://github.com/enterprise
GitHub Advanced SecurityEnterprise-grade security featureshttps://github.com/security/advanced-security
Copilot for BusinessEnterprise-grade AI featureshttps://github.com/features/copilot/copilot-business
Premium SupportEnterprise-grade 24/7 supporthttps://github.com/premium-support
Pricinghttps://github.com/pricing
Search syntax tipshttps://docs.github.com/search-github/github-code-search/understanding-github-code-search-syntax
documentationhttps://docs.github.com/search-github/github-code-search/understanding-github-code-search-syntax
Sign in https://patch-diff.githubusercontent.com/login?return_to=https%3A%2F%2Fgithub.com%2FCostaLab%2Fscopen
Sign up https://patch-diff.githubusercontent.com/signup?ref_cta=Sign+up&ref_loc=header+logged+out&ref_page=%2F%3Cuser-name%3E%2F%3Crepo-name%3E&source=header-repo&source_repo=CostaLab%2Fscopen
Reloadhttps://patch-diff.githubusercontent.com/CostaLab/scopen
Reloadhttps://patch-diff.githubusercontent.com/CostaLab/scopen
Reloadhttps://patch-diff.githubusercontent.com/CostaLab/scopen
CostaLab https://patch-diff.githubusercontent.com/CostaLab
scopenhttps://patch-diff.githubusercontent.com/CostaLab/scopen
Notifications https://patch-diff.githubusercontent.com/login?return_to=%2FCostaLab%2Fscopen
Fork 3 https://patch-diff.githubusercontent.com/login?return_to=%2FCostaLab%2Fscopen
Star 28 https://patch-diff.githubusercontent.com/login?return_to=%2FCostaLab%2Fscopen
GPL-3.0 license https://patch-diff.githubusercontent.com/CostaLab/scopen/blob/master/LICENSE
28 stars https://patch-diff.githubusercontent.com/CostaLab/scopen/stargazers
3 forks https://patch-diff.githubusercontent.com/CostaLab/scopen/forks
Branches https://patch-diff.githubusercontent.com/CostaLab/scopen/branches
Tags https://patch-diff.githubusercontent.com/CostaLab/scopen/tags
Activity https://patch-diff.githubusercontent.com/CostaLab/scopen/activity
Star https://patch-diff.githubusercontent.com/login?return_to=%2FCostaLab%2Fscopen
Notifications https://patch-diff.githubusercontent.com/login?return_to=%2FCostaLab%2Fscopen
Code https://patch-diff.githubusercontent.com/CostaLab/scopen
Issues 2 https://patch-diff.githubusercontent.com/CostaLab/scopen/issues
Pull requests 0 https://patch-diff.githubusercontent.com/CostaLab/scopen/pulls
Actions https://patch-diff.githubusercontent.com/CostaLab/scopen/actions
Projects 0 https://patch-diff.githubusercontent.com/CostaLab/scopen/projects
Security 0 https://patch-diff.githubusercontent.com/CostaLab/scopen/security
Insights https://patch-diff.githubusercontent.com/CostaLab/scopen/pulse
Code https://patch-diff.githubusercontent.com/CostaLab/scopen
Issues https://patch-diff.githubusercontent.com/CostaLab/scopen/issues
Pull requests https://patch-diff.githubusercontent.com/CostaLab/scopen/pulls
Actions https://patch-diff.githubusercontent.com/CostaLab/scopen/actions
Projects https://patch-diff.githubusercontent.com/CostaLab/scopen/projects
Security https://patch-diff.githubusercontent.com/CostaLab/scopen/security
Insights https://patch-diff.githubusercontent.com/CostaLab/scopen/pulse
Brancheshttps://patch-diff.githubusercontent.com/CostaLab/scopen/branches
Tagshttps://patch-diff.githubusercontent.com/CostaLab/scopen/tags
https://patch-diff.githubusercontent.com/CostaLab/scopen/branches
https://patch-diff.githubusercontent.com/CostaLab/scopen/tags
147 Commitshttps://patch-diff.githubusercontent.com/CostaLab/scopen/commits/master/
https://patch-diff.githubusercontent.com/CostaLab/scopen/commits/master/
.ideahttps://patch-diff.githubusercontent.com/CostaLab/scopen/tree/master/.idea
.ideahttps://patch-diff.githubusercontent.com/CostaLab/scopen/tree/master/.idea
scopenhttps://patch-diff.githubusercontent.com/CostaLab/scopen/tree/master/scopen
scopenhttps://patch-diff.githubusercontent.com/CostaLab/scopen/tree/master/scopen
scriptshttps://patch-diff.githubusercontent.com/CostaLab/scopen/tree/master/scripts
scriptshttps://patch-diff.githubusercontent.com/CostaLab/scopen/tree/master/scripts
unittesthttps://patch-diff.githubusercontent.com/CostaLab/scopen/tree/master/unittest
unittesthttps://patch-diff.githubusercontent.com/CostaLab/scopen/tree/master/unittest
vignetteshttps://patch-diff.githubusercontent.com/CostaLab/scopen/tree/master/vignettes
vignetteshttps://patch-diff.githubusercontent.com/CostaLab/scopen/tree/master/vignettes
LICENSEhttps://patch-diff.githubusercontent.com/CostaLab/scopen/blob/master/LICENSE
LICENSEhttps://patch-diff.githubusercontent.com/CostaLab/scopen/blob/master/LICENSE
MANIFESThttps://patch-diff.githubusercontent.com/CostaLab/scopen/blob/master/MANIFEST
MANIFESThttps://patch-diff.githubusercontent.com/CostaLab/scopen/blob/master/MANIFEST
README.mdhttps://patch-diff.githubusercontent.com/CostaLab/scopen/blob/master/README.md
README.mdhttps://patch-diff.githubusercontent.com/CostaLab/scopen/blob/master/README.md
setup.pyhttps://patch-diff.githubusercontent.com/CostaLab/scopen/blob/master/setup.py
setup.pyhttps://patch-diff.githubusercontent.com/CostaLab/scopen/blob/master/setup.py
READMEhttps://patch-diff.githubusercontent.com/CostaLab/scopen
GPL-3.0 licensehttps://patch-diff.githubusercontent.com/CostaLab/scopen
https://patch-diff.githubusercontent.com/CostaLab/scopen#scopen-chromatin-accessibility-estimation-for-single-cell-atac-data
https://patch-diff.githubusercontent.com/CostaLab/scopen#system-requirements
https://patch-diff.githubusercontent.com/CostaLab/scopen#installation
Minicondahttps://docs.conda.io/en/latest/miniconda.html
https://patch-diff.githubusercontent.com/CostaLab/scopen#dependencies
numpyhttps://numpy.org/
scipyhttps://www.scipy.org/
h5pyhttps://www.h5py.org/
pandashttps://pandas.pydata.org/
PyTableshttp://www.pytables.org/
matplotlibhttps://matplotlib.org/
scikit-learnhttps://scikit-learn.org/stable/
kneedhttps://github.com/arvkevi/kneed
https://patch-diff.githubusercontent.com/CostaLab/scopen#user-installation
https://patch-diff.githubusercontent.com/CostaLab/scopen#usage
https://patch-diff.githubusercontent.com/CostaLab/scopen#input-data
https://patch-diff.githubusercontent.com/CostaLab/scopen#run-scopen
https://patch-diff.githubusercontent.com/CostaLab/scopen#outputs
https://patch-diff.githubusercontent.com/CostaLab/scopen#how-to-run-scopen-for-your-data
https://patch-diff.githubusercontent.com/CostaLab/scopen#how-to-use-scopen-in-r
Signachttps://satijalab.org/signac/
herehttps://github.com/CostaLab/scopen/blob/master/vignettes/signac_pbmc.Rmd
https://patch-diff.githubusercontent.com/CostaLab/scopen#how-to-combine-scopen-and-episcanpy
jupyter notebookhttps://github.com/CostaLab/scopen/blob/master/vignettes/epiScanpy.ipynb
https://patch-diff.githubusercontent.com/CostaLab/scopen#reproduction
herehttps://github.com/CostaLab/scopen-reproducibility
Readme https://patch-diff.githubusercontent.com/CostaLab/scopen#readme-ov-file
GPL-3.0 license https://patch-diff.githubusercontent.com/CostaLab/scopen#GPL-3.0-1-ov-file
Please reload this pagehttps://patch-diff.githubusercontent.com/CostaLab/scopen
Activityhttps://patch-diff.githubusercontent.com/CostaLab/scopen/activity
Custom propertieshttps://patch-diff.githubusercontent.com/CostaLab/scopen/custom-properties
28 starshttps://patch-diff.githubusercontent.com/CostaLab/scopen/stargazers
4 watchinghttps://patch-diff.githubusercontent.com/CostaLab/scopen/watchers
3 forkshttps://patch-diff.githubusercontent.com/CostaLab/scopen/forks
Report repository https://patch-diff.githubusercontent.com/contact/report-content?content_url=https%3A%2F%2Fgithub.com%2FCostaLab%2Fscopen&report=CostaLab+%28user%29
Releases 3https://patch-diff.githubusercontent.com/CostaLab/scopen/releases
scOpen-1.0.0 Latest Sep 17, 2021 https://patch-diff.githubusercontent.com/CostaLab/scopen/releases/tag/v1.0.0
+ 2 releaseshttps://patch-diff.githubusercontent.com/CostaLab/scopen/releases
Packages 0https://patch-diff.githubusercontent.com/orgs/CostaLab/packages?repo_name=scopen
Please reload this pagehttps://patch-diff.githubusercontent.com/CostaLab/scopen
Python 97.9% https://patch-diff.githubusercontent.com/CostaLab/scopen/search?l=python
Cython 2.1% https://patch-diff.githubusercontent.com/CostaLab/scopen/search?l=cython
https://github.com
Termshttps://docs.github.com/site-policy/github-terms/github-terms-of-service
Privacyhttps://docs.github.com/site-policy/privacy-policies/github-privacy-statement
Securityhttps://github.com/security
Statushttps://www.githubstatus.com/
Communityhttps://github.community/
Docshttps://docs.github.com/
Contacthttps://support.github.com?tags=dotcom-footer

Viewport: width=device-width

URLs of crawlers that visited me.