René's URL Explorer Experiment


Title: GitHub - CompEpigen/pyjacker: Enhancer hijacking detection using WGS + RNA-seq

Open Graph Title: GitHub - CompEpigen/pyjacker: Enhancer hijacking detection using WGS + RNA-seq

X Title: GitHub - CompEpigen/pyjacker: Enhancer hijacking detection using WGS + RNA-seq

Description: Enhancer hijacking detection using WGS + RNA-seq. Contribute to CompEpigen/pyjacker development by creating an account on GitHub.

Open Graph Description: Enhancer hijacking detection using WGS + RNA-seq. Contribute to CompEpigen/pyjacker development by creating an account on GitHub.

X Description: Enhancer hijacking detection using WGS + RNA-seq. Contribute to CompEpigen/pyjacker development by creating an account on GitHub.

Opengraph URL: https://github.com/CompEpigen/pyjacker

X: @github

direct link

Domain: patch-diff.githubusercontent.com

route-pattern/:user_id/:repository
route-controllerfiles
route-actiondisambiguate
fetch-noncev2:3f342f66-e3c2-f36d-269b-6cda985b3858
current-catalog-service-hashf3abb0cc802f3d7b95fc8762b94bdcb13bf39634c40c357301c4aa1d67a256fb
request-idC3A0:13861A:4FD4B7B:6D5564F:698CEC71
html-safe-nonce2fa60ad34ed309d65fa520974ba84fb81a757ecec7729f27107fb900423753af
visitor-payloadeyJyZWZlcnJlciI6IiIsInJlcXVlc3RfaWQiOiJDM0EwOjEzODYxQTo0RkQ0QjdCOjZENTU2NEY6Njk4Q0VDNzEiLCJ2aXNpdG9yX2lkIjoiNzI2OTgyNjY3NTU2MTU0NDgxIiwicmVnaW9uX2VkZ2UiOiJpYWQiLCJyZWdpb25fcmVuZGVyIjoiaWFkIn0=
visitor-hmac36a24617ece169431943ea05d49e9c3588d9c03fc4518cf1da027501f94c0cde
hovercard-subject-tagrepository:641412900
github-keyboard-shortcutsrepository,copilot
google-site-verificationApib7-x98H0j5cPqHWwSMm6dNU4GmODRoqxLiDzdx9I
octolytics-urlhttps://collector.github.com/github/collect
analytics-location//
fb:app_id1401488693436528
apple-itunes-appapp-id=1477376905, app-argument=https://github.com/CompEpigen/pyjacker
twitter:imagehttps://opengraph.githubassets.com/c0082bdaca0459125ad216bb883976361de5b45d3aa2a3f24827d179b22fd65e/CompEpigen/pyjacker
twitter:cardsummary_large_image
og:imagehttps://opengraph.githubassets.com/c0082bdaca0459125ad216bb883976361de5b45d3aa2a3f24827d179b22fd65e/CompEpigen/pyjacker
og:image:altEnhancer hijacking detection using WGS + RNA-seq. Contribute to CompEpigen/pyjacker development by creating an account on GitHub.
og:image:width1200
og:image:height600
og:site_nameGitHub
og:typeobject
hostnamegithub.com
expected-hostnamegithub.com
None640eeb7b6ff4d8d106235d228c0c286e82592d4d2403227b5b2b4fc5832297a4
turbo-cache-controlno-preview
go-importgithub.com/CompEpigen/pyjacker git https://github.com/CompEpigen/pyjacker.git
octolytics-dimension-user_id46407257
octolytics-dimension-user_loginCompEpigen
octolytics-dimension-repository_id641412900
octolytics-dimension-repository_nwoCompEpigen/pyjacker
octolytics-dimension-repository_publictrue
octolytics-dimension-repository_is_forkfalse
octolytics-dimension-repository_network_root_id641412900
octolytics-dimension-repository_network_root_nwoCompEpigen/pyjacker
turbo-body-classeslogged-out env-production page-responsive
disable-turbofalse
browser-stats-urlhttps://api.github.com/_private/browser/stats
browser-errors-urlhttps://api.github.com/_private/browser/errors
release3d444f0a47beeeac94cddbb51c91ab408befe8d4
ui-targetfull
theme-color#1e2327
color-schemelight dark

Links:

Skip to contenthttps://patch-diff.githubusercontent.com/CompEpigen/pyjacker#start-of-content
https://patch-diff.githubusercontent.com/
Sign in https://patch-diff.githubusercontent.com/login?return_to=https%3A%2F%2Fgithub.com%2FCompEpigen%2Fpyjacker
GitHub CopilotWrite better code with AIhttps://github.com/features/copilot
GitHub SparkBuild and deploy intelligent appshttps://github.com/features/spark
GitHub ModelsManage and compare promptshttps://github.com/features/models
MCP RegistryNewIntegrate external toolshttps://github.com/mcp
ActionsAutomate any workflowhttps://github.com/features/actions
CodespacesInstant dev environmentshttps://github.com/features/codespaces
IssuesPlan and track workhttps://github.com/features/issues
Code ReviewManage code changeshttps://github.com/features/code-review
GitHub Advanced SecurityFind and fix vulnerabilitieshttps://github.com/security/advanced-security
Code securitySecure your code as you buildhttps://github.com/security/advanced-security/code-security
Secret protectionStop leaks before they starthttps://github.com/security/advanced-security/secret-protection
Why GitHubhttps://github.com/why-github
Documentationhttps://docs.github.com
Bloghttps://github.blog
Changeloghttps://github.blog/changelog
Marketplacehttps://github.com/marketplace
View all featureshttps://github.com/features
Enterpriseshttps://github.com/enterprise
Small and medium teamshttps://github.com/team
Startupshttps://github.com/enterprise/startups
Nonprofitshttps://github.com/solutions/industry/nonprofits
App Modernizationhttps://github.com/solutions/use-case/app-modernization
DevSecOpshttps://github.com/solutions/use-case/devsecops
DevOpshttps://github.com/solutions/use-case/devops
CI/CDhttps://github.com/solutions/use-case/ci-cd
View all use caseshttps://github.com/solutions/use-case
Healthcarehttps://github.com/solutions/industry/healthcare
Financial serviceshttps://github.com/solutions/industry/financial-services
Manufacturinghttps://github.com/solutions/industry/manufacturing
Governmenthttps://github.com/solutions/industry/government
View all industrieshttps://github.com/solutions/industry
View all solutionshttps://github.com/solutions
AIhttps://github.com/resources/articles?topic=ai
Software Developmenthttps://github.com/resources/articles?topic=software-development
DevOpshttps://github.com/resources/articles?topic=devops
Securityhttps://github.com/resources/articles?topic=security
View all topicshttps://github.com/resources/articles
Customer storieshttps://github.com/customer-stories
Events & webinarshttps://github.com/resources/events
Ebooks & reportshttps://github.com/resources/whitepapers
Business insightshttps://github.com/solutions/executive-insights
GitHub Skillshttps://skills.github.com
Documentationhttps://docs.github.com
Customer supporthttps://support.github.com
Community forumhttps://github.com/orgs/community/discussions
Trust centerhttps://github.com/trust-center
Partnershttps://github.com/partners
GitHub SponsorsFund open source developershttps://github.com/sponsors
Security Labhttps://securitylab.github.com
Maintainer Communityhttps://maintainers.github.com
Acceleratorhttps://github.com/accelerator
Archive Programhttps://archiveprogram.github.com
Topicshttps://github.com/topics
Trendinghttps://github.com/trending
Collectionshttps://github.com/collections
Enterprise platformAI-powered developer platformhttps://github.com/enterprise
GitHub Advanced SecurityEnterprise-grade security featureshttps://github.com/security/advanced-security
Copilot for BusinessEnterprise-grade AI featureshttps://github.com/features/copilot/copilot-business
Premium SupportEnterprise-grade 24/7 supporthttps://github.com/premium-support
Pricinghttps://github.com/pricing
Search syntax tipshttps://docs.github.com/search-github/github-code-search/understanding-github-code-search-syntax
documentationhttps://docs.github.com/search-github/github-code-search/understanding-github-code-search-syntax
Sign in https://patch-diff.githubusercontent.com/login?return_to=https%3A%2F%2Fgithub.com%2FCompEpigen%2Fpyjacker
Sign up https://patch-diff.githubusercontent.com/signup?ref_cta=Sign+up&ref_loc=header+logged+out&ref_page=%2F%3Cuser-name%3E%2F%3Crepo-name%3E&source=header-repo&source_repo=CompEpigen%2Fpyjacker
Reloadhttps://patch-diff.githubusercontent.com/CompEpigen/pyjacker
Reloadhttps://patch-diff.githubusercontent.com/CompEpigen/pyjacker
Reloadhttps://patch-diff.githubusercontent.com/CompEpigen/pyjacker
CompEpigen https://patch-diff.githubusercontent.com/CompEpigen
pyjackerhttps://patch-diff.githubusercontent.com/CompEpigen/pyjacker
Notifications https://patch-diff.githubusercontent.com/login?return_to=%2FCompEpigen%2Fpyjacker
Fork 2 https://patch-diff.githubusercontent.com/login?return_to=%2FCompEpigen%2Fpyjacker
Star 4 https://patch-diff.githubusercontent.com/login?return_to=%2FCompEpigen%2Fpyjacker
MIT license https://patch-diff.githubusercontent.com/CompEpigen/pyjacker/blob/main/LICENSE
4 stars https://patch-diff.githubusercontent.com/CompEpigen/pyjacker/stargazers
2 forks https://patch-diff.githubusercontent.com/CompEpigen/pyjacker/forks
Branches https://patch-diff.githubusercontent.com/CompEpigen/pyjacker/branches
Tags https://patch-diff.githubusercontent.com/CompEpigen/pyjacker/tags
Activity https://patch-diff.githubusercontent.com/CompEpigen/pyjacker/activity
Star https://patch-diff.githubusercontent.com/login?return_to=%2FCompEpigen%2Fpyjacker
Notifications https://patch-diff.githubusercontent.com/login?return_to=%2FCompEpigen%2Fpyjacker
Code https://patch-diff.githubusercontent.com/CompEpigen/pyjacker
Issues 0 https://patch-diff.githubusercontent.com/CompEpigen/pyjacker/issues
Pull requests 0 https://patch-diff.githubusercontent.com/CompEpigen/pyjacker/pulls
Actions https://patch-diff.githubusercontent.com/CompEpigen/pyjacker/actions
Projects 0 https://patch-diff.githubusercontent.com/CompEpigen/pyjacker/projects
Security 0 https://patch-diff.githubusercontent.com/CompEpigen/pyjacker/security
Insights https://patch-diff.githubusercontent.com/CompEpigen/pyjacker/pulse
Code https://patch-diff.githubusercontent.com/CompEpigen/pyjacker
Issues https://patch-diff.githubusercontent.com/CompEpigen/pyjacker/issues
Pull requests https://patch-diff.githubusercontent.com/CompEpigen/pyjacker/pulls
Actions https://patch-diff.githubusercontent.com/CompEpigen/pyjacker/actions
Projects https://patch-diff.githubusercontent.com/CompEpigen/pyjacker/projects
Security https://patch-diff.githubusercontent.com/CompEpigen/pyjacker/security
Insights https://patch-diff.githubusercontent.com/CompEpigen/pyjacker/pulse
Brancheshttps://patch-diff.githubusercontent.com/CompEpigen/pyjacker/branches
Tagshttps://patch-diff.githubusercontent.com/CompEpigen/pyjacker/tags
https://patch-diff.githubusercontent.com/CompEpigen/pyjacker/branches
https://patch-diff.githubusercontent.com/CompEpigen/pyjacker/tags
30 Commitshttps://patch-diff.githubusercontent.com/CompEpigen/pyjacker/commits/main/
https://patch-diff.githubusercontent.com/CompEpigen/pyjacker/commits/main/
.github/workflowshttps://patch-diff.githubusercontent.com/CompEpigen/pyjacker/tree/main/.github/workflows
.github/workflowshttps://patch-diff.githubusercontent.com/CompEpigen/pyjacker/tree/main/.github/workflows
datahttps://patch-diff.githubusercontent.com/CompEpigen/pyjacker/tree/main/data
datahttps://patch-diff.githubusercontent.com/CompEpigen/pyjacker/tree/main/data
pyjackerhttps://patch-diff.githubusercontent.com/CompEpigen/pyjacker/tree/main/pyjacker
pyjackerhttps://patch-diff.githubusercontent.com/CompEpigen/pyjacker/tree/main/pyjacker
Dockerfilehttps://patch-diff.githubusercontent.com/CompEpigen/pyjacker/blob/main/Dockerfile
Dockerfilehttps://patch-diff.githubusercontent.com/CompEpigen/pyjacker/blob/main/Dockerfile
LICENSEhttps://patch-diff.githubusercontent.com/CompEpigen/pyjacker/blob/main/LICENSE
LICENSEhttps://patch-diff.githubusercontent.com/CompEpigen/pyjacker/blob/main/LICENSE
README.mdhttps://patch-diff.githubusercontent.com/CompEpigen/pyjacker/blob/main/README.md
README.mdhttps://patch-diff.githubusercontent.com/CompEpigen/pyjacker/blob/main/README.md
config_AML.yamlhttps://patch-diff.githubusercontent.com/CompEpigen/pyjacker/blob/main/config_AML.yaml
config_AML.yamlhttps://patch-diff.githubusercontent.com/CompEpigen/pyjacker/blob/main/config_AML.yaml
pyproject.tomlhttps://patch-diff.githubusercontent.com/CompEpigen/pyjacker/blob/main/pyproject.toml
pyproject.tomlhttps://patch-diff.githubusercontent.com/CompEpigen/pyjacker/blob/main/pyproject.toml
READMEhttps://patch-diff.githubusercontent.com/CompEpigen/pyjacker
MIT licensehttps://patch-diff.githubusercontent.com/CompEpigen/pyjacker
https://patch-diff.githubusercontent.com/CompEpigen/pyjacker#pyjacker
https://doi.org/10.5281/zenodo.14227955
https://patch-diff.githubusercontent.com/CompEpigen/pyjacker#usage
https://github.com/CompEpigen/wf_WGShttps://github.com/CompEpigen/wf_WGS
https://patch-diff.githubusercontent.com/CompEpigen/pyjacker#docker
https://patch-diff.githubusercontent.com/CompEpigen/pyjacker#inputs
https://patch-diff.githubusercontent.com/CompEpigen/pyjacker#gene-expression-table-required
https://patch-diff.githubusercontent.com/CompEpigen/pyjacker#breakpoints-required
https://patch-diff.githubusercontent.com/CompEpigen/pyjacker#reference-files-gtf-and-cytobands-required
data/Homo_sapiens.GRCh37.75.gtf.gzhttps://github.com/CompEpigen/pyjacker/blob/main/data/Homo_sapiens.GRCh37.75.gtf.gz
data/Homo_sapiens.GRCh38.113.gtf.gzhttps://github.com/CompEpigen/pyjacker/blob/main/data/Homo_sapiens.GRCh38.113.gtf.gz
data/cytobands_hg19https://github.com/CompEpigen/pyjacker/blob/main/data/cytobands_hg19.tsv
data/cytobands_hg38https://github.com/CompEpigen/pyjacker/blob/main/data/cytobands_hg38.tsv
https://patch-diff.githubusercontent.com/CompEpigen/pyjacker#tads-optional
data/TADs_Dixon_IMR90_hg19.bedhttps://github.com/CompEpigen/pyjacker/blob/main/data/TADs_Dixon_IMR90_hg19.bed
data/TADs_Dixon_IMR90_hg38.bedhttps://github.com/CompEpigen/pyjacker/blob/main/data/TADs_Dixon_IMR90_hg38.bed
Dixon et al.https://www.nature.com/articles/nature14222
data/TADs_HSPC_hg19.bedhttps://github.com/CompEpigen/pyjacker/blob/main/data/TADs_HSPC_hg19.bed
HSPCshttps://doi.org/10.1182/bloodadvances.2023012161
https://patch-diff.githubusercontent.com/CompEpigen/pyjacker#allelic-read-counts-at-snps-in-rnaseq-optional
fast_asehttps://github.com/e-sollier/fast_ase
GATK ASEReadCounterhttps://gatk.broadinstitute.org/hc/en-us/articles/360037428291-ASEReadCounter
data/ASE_ckAMLhttps://github.com/CompEpigen/pyjacker/tree/main/data/ASE_ckAML
https://patch-diff.githubusercontent.com/CompEpigen/pyjacker#copy-number-alterations-optional
data/CNAs_ckAML.tsvhttps://github.com/CompEpigen/pyjacker/blob/main/data/CNAs_ckAML.tsv
https://patch-diff.githubusercontent.com/CompEpigen/pyjacker#enhancers-optional
data/enhancers_myeloid_hg19.tsvhttps://github.com/CompEpigen/pyjacker/blob/main/data/enhancers_myeloid_hg19.tsv
https://patch-diff.githubusercontent.com/CompEpigen/pyjacker#fusion-transcripts-optional
data/fusions_ckAML.tsvhttps://github.com/CompEpigen/pyjacker/blob/main/data/fusions_ckAML.tsv
https://patch-diff.githubusercontent.com/CompEpigen/pyjacker#outputs
https://patch-diff.githubusercontent.com/CompEpigen/pyjacker#reporthtml
manuscripthttps://doi.org/10.1158/2643-3230.BCD-24-0278
https://patch-diff.githubusercontent.com/CompEpigen/pyjacker#runtime
https://patch-diff.githubusercontent.com/CompEpigen/pyjacker#citation
https://doi.org/10.1158/2643-3230.BCD-24-0278https://doi.org/10.1158/2643-3230.BCD-24-0278
Readme https://patch-diff.githubusercontent.com/CompEpigen/pyjacker#readme-ov-file
MIT license https://patch-diff.githubusercontent.com/CompEpigen/pyjacker#MIT-1-ov-file
Please reload this pagehttps://patch-diff.githubusercontent.com/CompEpigen/pyjacker
Activityhttps://patch-diff.githubusercontent.com/CompEpigen/pyjacker/activity
Custom propertieshttps://patch-diff.githubusercontent.com/CompEpigen/pyjacker/custom-properties
4 starshttps://patch-diff.githubusercontent.com/CompEpigen/pyjacker/stargazers
2 watchinghttps://patch-diff.githubusercontent.com/CompEpigen/pyjacker/watchers
2 forkshttps://patch-diff.githubusercontent.com/CompEpigen/pyjacker/forks
Report repository https://patch-diff.githubusercontent.com/contact/report-content?content_url=https%3A%2F%2Fgithub.com%2FCompEpigen%2Fpyjacker&report=CompEpigen+%28user%29
Releases 6https://patch-diff.githubusercontent.com/CompEpigen/pyjacker/releases
v1.1.5 Latest Jun 28, 2025 https://patch-diff.githubusercontent.com/CompEpigen/pyjacker/releases/tag/v1.1.5
+ 5 releaseshttps://patch-diff.githubusercontent.com/CompEpigen/pyjacker/releases
Please reload this pagehttps://patch-diff.githubusercontent.com/CompEpigen/pyjacker
Python 99.7% https://patch-diff.githubusercontent.com/CompEpigen/pyjacker/search?l=python
Dockerfile 0.3% https://patch-diff.githubusercontent.com/CompEpigen/pyjacker/search?l=dockerfile
https://github.com
Termshttps://docs.github.com/site-policy/github-terms/github-terms-of-service
Privacyhttps://docs.github.com/site-policy/privacy-policies/github-privacy-statement
Securityhttps://github.com/security
Statushttps://www.githubstatus.com/
Communityhttps://github.community/
Docshttps://docs.github.com/
Contacthttps://support.github.com?tags=dotcom-footer

Viewport: width=device-width


URLs of crawlers that visited me.