René's URL Explorer Experiment


Title: Align CodeEntropy with entropy methods used in 2019 paper by jkalayan · Pull Request #267 · CCPBioSim/CodeEntropy · GitHub

Open Graph Title: Align CodeEntropy with entropy methods used in 2019 paper by jkalayan · Pull Request #267 · CCPBioSim/CodeEntropy

X Title: Align CodeEntropy with entropy methods used in 2019 paper by jkalayan · Pull Request #267 · CCPBioSim/CodeEntropy

Description: Summary CodeEntropy has been developed from code that calculated protein entropies, this PR aligns with the entropy methods used in the 2019 pure liquids paper, which compared calculated entropies...

Open Graph Description: Summary CodeEntropy has been developed from code that calculated protein entropies, this PR aligns with the entropy methods used in the 2019 pure liquids paper, which compared calculated entropies...

X Description: Summary CodeEntropy has been developed from code that calculated protein entropies, this PR aligns with the entropy methods used in the 2019 pure liquids paper, which compared calculated entropies...

Opengraph URL: https://github.com/CCPBioSim/CodeEntropy/pull/267

X: @github

direct link

Domain: patch-diff.githubusercontent.com

route-pattern/_view_fragments/voltron/pull_requests/show/:user_id/:repository/:id/pull_request_layout(.:format)
route-controllervoltron_pull_requests_fragments
route-actionpull_request_layout
fetch-noncev2:c209e6cb-9155-0c29-5832-84c3836d0c25
current-catalog-service-hashae870bc5e265a340912cde392f23dad3671a0a881730ffdadd82f2f57d81641b
request-id98A4:8A020:1EA4B74:29FAD45:698DCA64
html-safe-nonce2222d643a79a4bb40e85d6abcc1b9d2f1ee8c39144b7dc23b9800caf696cbf08
visitor-payloadeyJyZWZlcnJlciI6IiIsInJlcXVlc3RfaWQiOiI5OEE0OjhBMDIwOjFFQTRCNzQ6MjlGQUQ0NTo2OThEQ0E2NCIsInZpc2l0b3JfaWQiOiIxNTU5ODY4NzI5OTYwODExMTA4IiwicmVnaW9uX2VkZ2UiOiJpYWQiLCJyZWdpb25fcmVuZGVyIjoiaWFkIn0=
visitor-hmacc7265a029a7e2a3f2fdc2292d80638547c1af32de91765825f44705cdf440a0b
hovercard-subject-tagpull_request:3236103177
github-keyboard-shortcutsrepository,pull-request-list,pull-request-conversation,pull-request-files-changed,copilot
google-site-verificationApib7-x98H0j5cPqHWwSMm6dNU4GmODRoqxLiDzdx9I
octolytics-urlhttps://collector.github.com/github/collect
analytics-location///voltron/pull_requests_fragments/pull_request_layout
fb:app_id1401488693436528
apple-itunes-appapp-id=1477376905, app-argument=https://github.com/_view_fragments/voltron/pull_requests/show/CCPBioSim/CodeEntropy/267/pull_request_layout
twitter:imagehttps://opengraph.githubassets.com/9a3dfd1ff7ac570e45006c0899565c7d6a5fb01522e0414ee69d4d9fd2ab769b/CCPBioSim/CodeEntropy/pull/267
twitter:cardsummary_large_image
og:imagehttps://opengraph.githubassets.com/9a3dfd1ff7ac570e45006c0899565c7d6a5fb01522e0414ee69d4d9fd2ab769b/CCPBioSim/CodeEntropy/pull/267
og:image:altSummary CodeEntropy has been developed from code that calculated protein entropies, this PR aligns with the entropy methods used in the 2019 pure liquids paper, which compared calculated entropies...
og:image:width1200
og:image:height600
og:site_nameGitHub
og:typeobject
og:author:usernamejkalayan
hostnamegithub.com
expected-hostnamegithub.com
Noned9c5a945db9d79f5476dbe75d3700f24739ef28ab02037163bdeac4050cd4ded
turbo-cache-controlno-preview
go-importgithub.com/CCPBioSim/CodeEntropy git https://github.com/CCPBioSim/CodeEntropy.git
octolytics-dimension-user_id31038806
octolytics-dimension-user_loginCCPBioSim
octolytics-dimension-repository_id509450610
octolytics-dimension-repository_nwoCCPBioSim/CodeEntropy
octolytics-dimension-repository_publictrue
octolytics-dimension-repository_is_forkfalse
octolytics-dimension-repository_network_root_id509450610
octolytics-dimension-repository_network_root_nwoCCPBioSim/CodeEntropy
turbo-body-classeslogged-out env-production page-responsive
disable-turbofalse
browser-stats-urlhttps://api.github.com/_private/browser/stats
browser-errors-urlhttps://api.github.com/_private/browser/errors
release650e13e6e6d3957db6415d62f055e6a5fd0037db
ui-targetfull
theme-color#1e2327
color-schemelight dark

Links:

Skip to contenthttps://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267#start-of-content
https://patch-diff.githubusercontent.com/
Sign in https://patch-diff.githubusercontent.com/login?return_to=https%3A%2F%2Fgithub.com%2FCCPBioSim%2FCodeEntropy%2Fpull%2F267
GitHub CopilotWrite better code with AIhttps://github.com/features/copilot
GitHub SparkBuild and deploy intelligent appshttps://github.com/features/spark
GitHub ModelsManage and compare promptshttps://github.com/features/models
MCP RegistryNewIntegrate external toolshttps://github.com/mcp
ActionsAutomate any workflowhttps://github.com/features/actions
CodespacesInstant dev environmentshttps://github.com/features/codespaces
IssuesPlan and track workhttps://github.com/features/issues
Code ReviewManage code changeshttps://github.com/features/code-review
GitHub Advanced SecurityFind and fix vulnerabilitieshttps://github.com/security/advanced-security
Code securitySecure your code as you buildhttps://github.com/security/advanced-security/code-security
Secret protectionStop leaks before they starthttps://github.com/security/advanced-security/secret-protection
Why GitHubhttps://github.com/why-github
Documentationhttps://docs.github.com
Bloghttps://github.blog
Changeloghttps://github.blog/changelog
Marketplacehttps://github.com/marketplace
View all featureshttps://github.com/features
Enterpriseshttps://github.com/enterprise
Small and medium teamshttps://github.com/team
Startupshttps://github.com/enterprise/startups
Nonprofitshttps://github.com/solutions/industry/nonprofits
App Modernizationhttps://github.com/solutions/use-case/app-modernization
DevSecOpshttps://github.com/solutions/use-case/devsecops
DevOpshttps://github.com/solutions/use-case/devops
CI/CDhttps://github.com/solutions/use-case/ci-cd
View all use caseshttps://github.com/solutions/use-case
Healthcarehttps://github.com/solutions/industry/healthcare
Financial serviceshttps://github.com/solutions/industry/financial-services
Manufacturinghttps://github.com/solutions/industry/manufacturing
Governmenthttps://github.com/solutions/industry/government
View all industrieshttps://github.com/solutions/industry
View all solutionshttps://github.com/solutions
AIhttps://github.com/resources/articles?topic=ai
Software Developmenthttps://github.com/resources/articles?topic=software-development
DevOpshttps://github.com/resources/articles?topic=devops
Securityhttps://github.com/resources/articles?topic=security
View all topicshttps://github.com/resources/articles
Customer storieshttps://github.com/customer-stories
Events & webinarshttps://github.com/resources/events
Ebooks & reportshttps://github.com/resources/whitepapers
Business insightshttps://github.com/solutions/executive-insights
GitHub Skillshttps://skills.github.com
Documentationhttps://docs.github.com
Customer supporthttps://support.github.com
Community forumhttps://github.com/orgs/community/discussions
Trust centerhttps://github.com/trust-center
Partnershttps://github.com/partners
GitHub SponsorsFund open source developershttps://github.com/sponsors
Security Labhttps://securitylab.github.com
Maintainer Communityhttps://maintainers.github.com
Acceleratorhttps://github.com/accelerator
Archive Programhttps://archiveprogram.github.com
Topicshttps://github.com/topics
Trendinghttps://github.com/trending
Collectionshttps://github.com/collections
Enterprise platformAI-powered developer platformhttps://github.com/enterprise
GitHub Advanced SecurityEnterprise-grade security featureshttps://github.com/security/advanced-security
Copilot for BusinessEnterprise-grade AI featureshttps://github.com/features/copilot/copilot-business
Premium SupportEnterprise-grade 24/7 supporthttps://github.com/premium-support
Pricinghttps://github.com/pricing
Search syntax tipshttps://docs.github.com/search-github/github-code-search/understanding-github-code-search-syntax
documentationhttps://docs.github.com/search-github/github-code-search/understanding-github-code-search-syntax
Sign in https://patch-diff.githubusercontent.com/login?return_to=https%3A%2F%2Fgithub.com%2FCCPBioSim%2FCodeEntropy%2Fpull%2F267
Sign up https://patch-diff.githubusercontent.com/signup?ref_cta=Sign+up&ref_loc=header+logged+out&ref_page=%2F%3Cuser-name%3E%2F%3Crepo-name%3E%2Fvoltron%2Fpull_requests_fragments%2Fpull_request_layout&source=header-repo&source_repo=CCPBioSim%2FCodeEntropy
Reloadhttps://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267
Reloadhttps://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267
Reloadhttps://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267
CCPBioSim https://patch-diff.githubusercontent.com/CCPBioSim
CodeEntropyhttps://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy
Notifications https://patch-diff.githubusercontent.com/login?return_to=%2FCCPBioSim%2FCodeEntropy
Fork 1 https://patch-diff.githubusercontent.com/login?return_to=%2FCCPBioSim%2FCodeEntropy
Star 11 https://patch-diff.githubusercontent.com/login?return_to=%2FCCPBioSim%2FCodeEntropy
Code https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy
Issues 9 https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/issues
Pull requests 0 https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pulls
Actions https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/actions
Projects 0 https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/projects
Security 0 https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/security
Insights https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pulse
Code https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy
Issues https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/issues
Pull requests https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pulls
Actions https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/actions
Projects https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/projects
Security https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/security
Insights https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pulse
Sign up for GitHub https://patch-diff.githubusercontent.com/signup?return_to=%2FCCPBioSim%2FCodeEntropy%2Fissues%2Fnew%2Fchoose
terms of servicehttps://docs.github.com/terms
privacy statementhttps://docs.github.com/privacy
Sign inhttps://patch-diff.githubusercontent.com/login?return_to=%2FCCPBioSim%2FCodeEntropy%2Fissues%2Fnew%2Fchoose
Jump to bottomhttps://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267#issue-comment-box
jkalayanhttps://patch-diff.githubusercontent.com/jkalayan
mainhttps://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/tree/main
UArovib-fixhttps://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/tree/UArovib-fix
Align CodeEntropy with entropy methods used in 2019 paper https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267#top
jkalayanhttps://patch-diff.githubusercontent.com/jkalayan
mainhttps://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/tree/main
UArovib-fixhttps://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/tree/UArovib-fix
Conversation 14 https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267
Commits 23 https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits
Checks 27 https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/checks
Files changed https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/files
Please reload this pagehttps://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267
https://github.co/hiddenchars
https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/{{ revealButtonHref }}
https://patch-diff.githubusercontent.com/jkalayan
jkalayanhttps://patch-diff.githubusercontent.com/jkalayan
Feb 2, 2026https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267#issue-3885404016
2019 pure liquids paperhttps://www.mdpi.com/1099-4300/21/8/750
https://private-user-images.githubusercontent.com/62553315/543729423-5fa0ae5e-646d-4800-8821-cc8c2ddba673.png?jwt=eyJ0eXAiOiJKV1QiLCJhbGciOiJIUzI1NiJ9.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.c280QJzQufYTuvkcVr3d-lFmFRujztgPZmjoM_bKxvQ
Please reload this pagehttps://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267
jkalayanhttps://patch-diff.githubusercontent.com/jkalayan
January 27, 2026 22:15https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267#commits-pushed-5d65da5
https://patch-diff.githubusercontent.com/jkalayan
add modified UA-rovib, modified RES-rovib and dimensions in universe opshttps://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits/5d65da5b35f6dc4e48bbfbd079bfd086ab772183
5d65da5https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits/5d65da5b35f6dc4e48bbfbd079bfd086ab772183
https://patch-diff.githubusercontent.com/jkalayan
add combined FTmatrices, match UA bonded axes to Jon's code, comment …https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits/993f8274bfe27d015f67e8a1a01aaf52269b6954
993f827https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits/993f8274bfe27d015f67e8a1a01aaf52269b6954
https://patch-diff.githubusercontent.com/jkalayan
add arg to choose between axes schemeshttps://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits/316f8d47982a07e3f617f8844069b0a5dccd9bc7
316f8d4https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits/316f8d47982a07e3f617f8844069b0a5dccd9bc7
https://patch-diff.githubusercontent.com/jkalayan
Merge remote-tracking branch 'origin/main' into UArovib-fixhttps://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits/612b5d0fa1b9c3f14a54470669d4b88db69d541b
612b5d0https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits/612b5d0fa1b9c3f14a54470669d4b88db69d541b
https://patch-diff.githubusercontent.com/jkalayan
uncomment Sconf calcshttps://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits/e4a41f46256cb7da5bf1106ed7cb259dc1a15a8a
e4a41f4https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits/e4a41f46256cb7da5bf1106ed7cb259dc1a15a8a
https://patch-diff.githubusercontent.com/jkalayan
match main line spacehttps://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits/3a8295b3df2cf9909ba988e83e1506578cd6a29a
3a8295bhttps://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits/3a8295b3df2cf9909ba988e83e1506578cd6a29a
https://patch-diff.githubusercontent.com/jkalayan
jkalayanhttps://patch-diff.githubusercontent.com/jkalayan
harryswift01https://patch-diff.githubusercontent.com/harryswift01
jimboidhttps://patch-diff.githubusercontent.com/jimboid
skfeganhttps://patch-diff.githubusercontent.com/skfegan
February 2, 2026 11:23https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267#event-22462526466
https://patch-diff.githubusercontent.com/jkalayan
jkalayanhttps://patch-diff.githubusercontent.com/jkalayan
Feb 2, 2026https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267#event-22462526600
https://patch-diff.githubusercontent.com/jimboid
jimboidhttps://patch-diff.githubusercontent.com/jimboid
Feb 2, 2026 https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267#pullrequestreview-3738834495
View reviewed changes https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/files/3a8295b3df2cf9909ba988e83e1506578cd6a29a
CodeEntropy/axes.pyhttps://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/files/3a8295b3df2cf9909ba988e83e1506578cd6a29a#diff-ec097f2a73f78b169123854c86230a139feb5fbbb560409974be2a4c9b70a327
Please reload this pagehttps://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267
https://patch-diff.githubusercontent.com/jimboid
jimboidhttps://patch-diff.githubusercontent.com/jimboid
Feb 2, 2026 https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267#pullrequestreview-3738836766
View reviewed changes https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/files/3a8295b3df2cf9909ba988e83e1506578cd6a29a
CodeEntropy/axes.pyhttps://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/files/3a8295b3df2cf9909ba988e83e1506578cd6a29a#diff-ec097f2a73f78b169123854c86230a139feb5fbbb560409974be2a4c9b70a327
Please reload this pagehttps://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267
https://patch-diff.githubusercontent.com/jimboid
jimboidhttps://patch-diff.githubusercontent.com/jimboid
Feb 2, 2026 https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267#pullrequestreview-3738852004
View reviewed changes https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/files/3a8295b3df2cf9909ba988e83e1506578cd6a29a
CodeEntropy/axes.pyhttps://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/files/3a8295b3df2cf9909ba988e83e1506578cd6a29a#diff-ec097f2a73f78b169123854c86230a139feb5fbbb560409974be2a4c9b70a327
Please reload this pagehttps://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267
https://patch-diff.githubusercontent.com/jimboid
jimboidhttps://patch-diff.githubusercontent.com/jimboid
Feb 2, 2026 https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267#pullrequestreview-3738864566
View reviewed changes https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/files/3a8295b3df2cf9909ba988e83e1506578cd6a29a
jimboidhttps://patch-diff.githubusercontent.com/jimboid
Please reload this pagehttps://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267
https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267#pullrequestreview-3738864566
Learn morehttps://docs.github.com/articles/managing-disruptive-comments/#hiding-a-comment
Please reload this pagehttps://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267
https://patch-diff.githubusercontent.com/jkalayan
remove redundant axes methodshttps://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits/8a6ecdd5f3829004eebec15901a0a7b38b9bf100
8a6ecddhttps://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits/8a6ecdd5f3829004eebec15901a0a7b38b9bf100
https://patch-diff.githubusercontent.com/jkalayan
jkalayanhttps://patch-diff.githubusercontent.com/jkalayan
Feb 2, 2026https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267#issuecomment-3834661833
Please reload this pagehttps://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267
https://patch-diff.githubusercontent.com/ioanaapapa
ioanaapapahttps://patch-diff.githubusercontent.com/ioanaapapa
Feb 2, 2026https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267#issuecomment-3836151800
#235https://github.com/CCPBioSim/CodeEntropy/issues/235
Please reload this pagehttps://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267
Rovibrational Entropy #178 https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/issues/178
Conformational Entropy Changes #235 https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/issues/235
harryswift01https://patch-diff.githubusercontent.com/harryswift01
February 2, 2026 16:19https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267#commits-pushed-5d076f1
https://patch-diff.githubusercontent.com/harryswift01
fix unit tests within test_entropy.py in relation to changes within…https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits/5d076f12f51713b5490e7c47e5997d3ea14ab26d
5d076f1https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits/5d076f12f51713b5490e7c47e5997d3ea14ab26d
#267https://github.com/CCPBioSim/CodeEntropy/pull/267
https://patch-diff.githubusercontent.com/harryswift01
fix unit tests within test_levels.py in relation to changes within PR https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits/59c93993fad5a8998a031d3cf2d235b9a5e7b7ce
59c9399https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits/59c93993fad5a8998a031d3cf2d235b9a5e7b7ce
#267https://github.com/CCPBioSim/CodeEntropy/pull/267
https://patch-diff.githubusercontent.com/harryswift01
fix unit tests within test_mda_universe_operations.py in relation t…https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits/9bcaa37e4c584278516872cdf2045a50848b1131
9bcaa37https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits/9bcaa37e4c584278516872cdf2045a50848b1131
#267https://github.com/CCPBioSim/CodeEntropy/pull/267
https://patch-diff.githubusercontent.com/harryswift01
include additional unit tests within test_entropy.py in relation to…https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits/f618cd413d423b4b6a387b409256d0dc61abe450
f618cd4https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits/f618cd413d423b4b6a387b409256d0dc61abe450
#267https://github.com/CCPBioSim/CodeEntropy/pull/267
https://patch-diff.githubusercontent.com/harryswift01
include additional unit tests within test_levels.py in relation to …https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits/c3824c486b58347a90c1a639c864c16f5ffb0085
c3824c4https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits/c3824c486b58347a90c1a639c864c16f5ffb0085
#267https://github.com/CCPBioSim/CodeEntropy/pull/267
https://patch-diff.githubusercontent.com/harryswift01
introduce new unit tests within test_axes.py in relation to changes…https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits/f22f3015db8cf26999449b94597310990c291fa1
f22f301https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits/f22f3015db8cf26999449b94597310990c291fa1
#267https://github.com/CCPBioSim/CodeEntropy/pull/267
https://patch-diff.githubusercontent.com/harryswift01
relax tolerance for forcetorqueTRANS and forcetorqueROT vibration…https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits/e56f7e9049dc9554fa439d1f6913cf223c3456e0
e56f7e9https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits/e56f7e9049dc9554fa439d1f6913cf223c3456e0
https://patch-diff.githubusercontent.com/harryswift01
harryswift01https://patch-diff.githubusercontent.com/harryswift01
Feb 3, 2026 https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267#pullrequestreview-3745907056
View reviewed changes https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/files/e56f7e9049dc9554fa439d1f6913cf223c3456e0
harryswift01https://patch-diff.githubusercontent.com/harryswift01
https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267#pullrequestreview-3745907056
Learn morehttps://docs.github.com/articles/managing-disruptive-comments/#hiding-a-comment
Please reload this pagehttps://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267
CodeEntropy/axes.pyhttps://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/files/e56f7e9049dc9554fa439d1f6913cf223c3456e0#diff-ec097f2a73f78b169123854c86230a139feb5fbbb560409974be2a4c9b70a327
Please reload this pagehttps://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267
CodeEntropy/axes.pyhttps://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/files/e56f7e9049dc9554fa439d1f6913cf223c3456e0#diff-ec097f2a73f78b169123854c86230a139feb5fbbb560409974be2a4c9b70a327
Please reload this pagehttps://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267
CodeEntropy/levels.pyhttps://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/files/e56f7e9049dc9554fa439d1f6913cf223c3456e0#diff-82b32b7bcbabe51098216f904d831c100d0b8570183c42812254fec87f292251
Please reload this pagehttps://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267
CodeEntropy/levels.pyhttps://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/files/e56f7e9049dc9554fa439d1f6913cf223c3456e0#diff-82b32b7bcbabe51098216f904d831c100d0b8570183c42812254fec87f292251
Please reload this pagehttps://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267
CodeEntropy/levels.pyhttps://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/files/e56f7e9049dc9554fa439d1f6913cf223c3456e0#diff-82b32b7bcbabe51098216f904d831c100d0b8570183c42812254fec87f292251
Please reload this pagehttps://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267
CodeEntropy/levels.pyhttps://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/files/e56f7e9049dc9554fa439d1f6913cf223c3456e0#diff-82b32b7bcbabe51098216f904d831c100d0b8570183c42812254fec87f292251
Please reload this pagehttps://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267
jkalayanhttps://patch-diff.githubusercontent.com/jkalayan
February 4, 2026 11:31https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267#commits-pushed-5340484
https://patch-diff.githubusercontent.com/jkalayan
unwrap/make whole molecules for MOI, COM and PA calcshttps://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits/534048442d2411627b8391cf1a801e096b3ec8dd
5340484https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits/534048442d2411627b8391cf1a801e096b3ec8dd
https://patch-diff.githubusercontent.com/jkalayan
Merge branch 'UArovib-fix' ofhttps://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits/ae5da4a134b06121ba46a97c9449f18e30ff5214
https://github.com/CCPBioSim/CodeEntropyhttps://github.com/CCPBioSim/CodeEntropy
https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits/ae5da4a134b06121ba46a97c9449f18e30ff5214
ae5da4ahttps://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits/ae5da4a134b06121ba46a97c9449f18e30ff5214
https://patch-diff.githubusercontent.com/jkalayan
remove unused calcshttps://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits/0f4d218d79a57f00ed94e0b094552ea7cb08e164
0f4d218https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits/0f4d218d79a57f00ed94e0b094552ea7cb08e164
https://patch-diff.githubusercontent.com/jkalayan
update docshttps://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits/63183fd042c7dc85313c751e8a991e8dba50f542
63183fdhttps://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits/63183fd042c7dc85313c751e8a991e8dba50f542
https://patch-diff.githubusercontent.com/jimboid
jimboidhttps://patch-diff.githubusercontent.com/jimboid
February 4, 2026 12:54https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267#event-22527899208
harryswift01https://patch-diff.githubusercontent.com/harryswift01
February 4, 2026 14:29https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267#commits-pushed-8190c8a
https://patch-diff.githubusercontent.com/harryswift01
Merge remote-tracking branch 'origin/main' into UArovib-fixhttps://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits/8190c8a6fb04727522956f50c1404a341a5a57bb
8190c8ahttps://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits/8190c8a6fb04727522956f50c1404a341a5a57bb
https://patch-diff.githubusercontent.com/harryswift01
fix unit tests withinhttps://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits/7209969aead57d0c7540b54e7926ca0de45c110c
test_axes.pyhttps://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits/7209969aead57d0c7540b54e7926ca0de45c110c
in relation to PRhttps://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits/7209969aead57d0c7540b54e7926ca0de45c110c
#267https://github.com/CCPBioSim/CodeEntropy/pull/267
7209969https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits/7209969aead57d0c7540b54e7926ca0de45c110c
https://patch-diff.githubusercontent.com/harryswift01
fix unit tests withinhttps://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits/1278269e507946f26b2c95fe3d3c1ad54d36bfb4
test_levels.pyhttps://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits/1278269e507946f26b2c95fe3d3c1ad54d36bfb4
in relation to PRhttps://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits/1278269e507946f26b2c95fe3d3c1ad54d36bfb4
#267https://github.com/CCPBioSim/CodeEntropy/pull/267
1278269https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits/1278269e507946f26b2c95fe3d3c1ad54d36bfb4
https://patch-diff.githubusercontent.com/harryswift01
fix sorting bug in get_vanilla_axes moment of inertiahttps://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits/658e276327b799df2c436c255e97e33ad2bba9de
658e276https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits/658e276327b799df2c436c255e97e33ad2bba9de
https://patch-diff.githubusercontent.com/harryswift01
reduce tolerance within test_conformational_entropy_calculationhttps://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits/d4f59240fcd8fad295107c69aded2bd0cc1736ca
d4f5924https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits/d4f59240fcd8fad295107c69aded2bd0cc1736ca
https://patch-diff.githubusercontent.com/harryswift01
harryswift01https://patch-diff.githubusercontent.com/harryswift01
v1.1.0https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/milestone/11
Feb 5, 2026https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267#event-22553094227
https://patch-diff.githubusercontent.com/jkalayan
jkalayanhttps://patch-diff.githubusercontent.com/jkalayan
harryswift01https://patch-diff.githubusercontent.com/harryswift01
February 5, 2026 10:05https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267#event-22553764430
https://patch-diff.githubusercontent.com/harryswift01
harryswift01https://patch-diff.githubusercontent.com/harryswift01
Feb 5, 2026 https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267#pullrequestreview-3756213648
View reviewed changes https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/files/d4f59240fcd8fad295107c69aded2bd0cc1736ca
harryswift01https://patch-diff.githubusercontent.com/harryswift01
Please reload this pagehttps://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267
https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267#pullrequestreview-3756213648
Learn morehttps://docs.github.com/articles/managing-disruptive-comments/#hiding-a-comment
Please reload this pagehttps://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267
Conformational Entropy Changes #235 https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/issues/235
Rovibrational Entropy #178 https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/issues/178
https://patch-diff.githubusercontent.com/jkalayan
jkalayanhttps://patch-diff.githubusercontent.com/jkalayan
0418f8bhttps://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/commit/0418f8b49301e84be4f8cf60701169c281d70b8b
Feb 5, 2026https://github.com/CCPBioSim/CodeEntropy/pull/267#event-22558868193
Please reload this pagehttps://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267
https://patch-diff.githubusercontent.com/jkalayan
jkalayanhttps://patch-diff.githubusercontent.com/jkalayan
February 5, 2026 13:32https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267#event-22558874705
Sign up for freehttps://patch-diff.githubusercontent.com/join?source=comment-repo
Sign in to commenthttps://patch-diff.githubusercontent.com/login?return_to=https%3A%2F%2Fgithub.com%2FCCPBioSim%2FCodeEntropy%2Fpull%2F267
https://patch-diff.githubusercontent.com/harryswift01
harryswift01 https://patch-diff.githubusercontent.com/harryswift01
https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/files/d4f59240fcd8fad295107c69aded2bd0cc1736ca
https://patch-diff.githubusercontent.com/skfegan
skfegan https://patch-diff.githubusercontent.com/skfegan
https://patch-diff.githubusercontent.com/jimboid
jimboid https://patch-diff.githubusercontent.com/jimboid
https://patch-diff.githubusercontent.com/jkalayan
jkalayan https://patch-diff.githubusercontent.com/jkalayan
v1.1.0 https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/milestone/11
Conformational Entropy Changes https://github.com/CCPBioSim/CodeEntropy/issues/235
Rovibrational Entropy https://github.com/CCPBioSim/CodeEntropy/issues/178
Please reload this pagehttps://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267
https://patch-diff.githubusercontent.com/jkalayan
https://patch-diff.githubusercontent.com/ioanaapapa
https://patch-diff.githubusercontent.com/jimboid
https://patch-diff.githubusercontent.com/harryswift01
https://github.com
Termshttps://docs.github.com/site-policy/github-terms/github-terms-of-service
Privacyhttps://docs.github.com/site-policy/privacy-policies/github-privacy-statement
Securityhttps://github.com/security
Statushttps://www.githubstatus.com/
Communityhttps://github.community/
Docshttps://docs.github.com/
Contacthttps://support.github.com?tags=dotcom-footer

Viewport: width=device-width


URLs of crawlers that visited me.