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CodeEntropy has been developed from code that calculated protein entropies, this PR aligns with the entropy methods used in the 2019 pure liquids paper, which compared calculated entropies... |
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Align CodeEntropy with entropy methods used in 2019 paper
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| add modified UA-rovib, modified RES-rovib and dimensions in universe ops | https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits/5d65da5b35f6dc4e48bbfbd079bfd086ab772183 |
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| #235 | https://github.com/CCPBioSim/CodeEntropy/issues/235 |
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Rovibrational Entropy
#178
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Conformational Entropy Changes
#235
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| February 2, 2026 16:19 | https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267#commits-pushed-5d076f1 |
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| fix unit tests within test_entropy.py in relation to changes within… | https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits/5d076f12f51713b5490e7c47e5997d3ea14ab26d |
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| #267 | https://github.com/CCPBioSim/CodeEntropy/pull/267 |
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| fix unit tests within test_levels.py in relation to changes within PR | https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits/59c93993fad5a8998a031d3cf2d235b9a5e7b7ce |
| 59c9399 | https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits/59c93993fad5a8998a031d3cf2d235b9a5e7b7ce |
| #267 | https://github.com/CCPBioSim/CodeEntropy/pull/267 |
|
| https://patch-diff.githubusercontent.com/harryswift01 |
| fix unit tests within test_mda_universe_operations.py in relation t… | https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits/9bcaa37e4c584278516872cdf2045a50848b1131 |
| 9bcaa37 | https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits/9bcaa37e4c584278516872cdf2045a50848b1131 |
| #267 | https://github.com/CCPBioSim/CodeEntropy/pull/267 |
|
| https://patch-diff.githubusercontent.com/harryswift01 |
| include additional unit tests within test_entropy.py in relation to… | https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits/f618cd413d423b4b6a387b409256d0dc61abe450 |
| f618cd4 | https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits/f618cd413d423b4b6a387b409256d0dc61abe450 |
| #267 | https://github.com/CCPBioSim/CodeEntropy/pull/267 |
|
| https://patch-diff.githubusercontent.com/harryswift01 |
| include additional unit tests within test_levels.py in relation to … | https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits/c3824c486b58347a90c1a639c864c16f5ffb0085 |
| c3824c4 | https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits/c3824c486b58347a90c1a639c864c16f5ffb0085 |
| #267 | https://github.com/CCPBioSim/CodeEntropy/pull/267 |
|
| https://patch-diff.githubusercontent.com/harryswift01 |
| introduce new unit tests within test_axes.py in relation to changes… | https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits/f22f3015db8cf26999449b94597310990c291fa1 |
| f22f301 | https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits/f22f3015db8cf26999449b94597310990c291fa1 |
| #267 | https://github.com/CCPBioSim/CodeEntropy/pull/267 |
|
| https://patch-diff.githubusercontent.com/harryswift01 |
| relax tolerance for forcetorqueTRANS and forcetorqueROT vibration… | https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits/e56f7e9049dc9554fa439d1f6913cf223c3456e0 |
| e56f7e9 | https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits/e56f7e9049dc9554fa439d1f6913cf223c3456e0 |
| https://patch-diff.githubusercontent.com/harryswift01 |
| harryswift01 | https://patch-diff.githubusercontent.com/harryswift01 |
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Feb 3, 2026
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View reviewed changes
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| Please reload this page | https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267 |
| CodeEntropy/axes.py | https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/files/e56f7e9049dc9554fa439d1f6913cf223c3456e0#diff-ec097f2a73f78b169123854c86230a139feb5fbbb560409974be2a4c9b70a327 |
| Please reload this page | https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267 |
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| Please reload this page | https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267 |
| CodeEntropy/levels.py | https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/files/e56f7e9049dc9554fa439d1f6913cf223c3456e0#diff-82b32b7bcbabe51098216f904d831c100d0b8570183c42812254fec87f292251 |
| Please reload this page | https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267 |
| CodeEntropy/levels.py | https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/files/e56f7e9049dc9554fa439d1f6913cf223c3456e0#diff-82b32b7bcbabe51098216f904d831c100d0b8570183c42812254fec87f292251 |
| Please reload this page | https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267 |
| CodeEntropy/levels.py | https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/files/e56f7e9049dc9554fa439d1f6913cf223c3456e0#diff-82b32b7bcbabe51098216f904d831c100d0b8570183c42812254fec87f292251 |
| Please reload this page | https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267 |
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| February 4, 2026 11:31 | https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267#commits-pushed-5340484 |
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| unwrap/make whole molecules for MOI, COM and PA calcs | https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits/534048442d2411627b8391cf1a801e096b3ec8dd |
| 5340484 | https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits/534048442d2411627b8391cf1a801e096b3ec8dd |
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| Merge branch 'UArovib-fix' of | https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits/ae5da4a134b06121ba46a97c9449f18e30ff5214 |
| https://github.com/CCPBioSim/CodeEntropy | https://github.com/CCPBioSim/CodeEntropy |
| … | https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits/ae5da4a134b06121ba46a97c9449f18e30ff5214 |
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| https://patch-diff.githubusercontent.com/jkalayan |
| remove unused calcs | https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits/0f4d218d79a57f00ed94e0b094552ea7cb08e164 |
| 0f4d218 | https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits/0f4d218d79a57f00ed94e0b094552ea7cb08e164 |
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| update docs | https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits/63183fd042c7dc85313c751e8a991e8dba50f542 |
| 63183fd | https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits/63183fd042c7dc85313c751e8a991e8dba50f542 |
| https://patch-diff.githubusercontent.com/jimboid |
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| February 4, 2026 12:54 | https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267#event-22527899208 |
| harryswift01 | https://patch-diff.githubusercontent.com/harryswift01 |
| February 4, 2026 14:29 | https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267#commits-pushed-8190c8a |
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| https://patch-diff.githubusercontent.com/harryswift01 |
| Merge remote-tracking branch 'origin/main' into UArovib-fix | https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits/8190c8a6fb04727522956f50c1404a341a5a57bb |
| 8190c8a | https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits/8190c8a6fb04727522956f50c1404a341a5a57bb |
|
| https://patch-diff.githubusercontent.com/harryswift01 |
| fix unit tests within | https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits/7209969aead57d0c7540b54e7926ca0de45c110c |
| test_axes.py | https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits/7209969aead57d0c7540b54e7926ca0de45c110c |
| in relation to PR | https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits/7209969aead57d0c7540b54e7926ca0de45c110c |
| #267 | https://github.com/CCPBioSim/CodeEntropy/pull/267 |
| 7209969 | https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits/7209969aead57d0c7540b54e7926ca0de45c110c |
|
| https://patch-diff.githubusercontent.com/harryswift01 |
| fix unit tests within | https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits/1278269e507946f26b2c95fe3d3c1ad54d36bfb4 |
| test_levels.py | https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits/1278269e507946f26b2c95fe3d3c1ad54d36bfb4 |
| in relation to PR | https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits/1278269e507946f26b2c95fe3d3c1ad54d36bfb4 |
| #267 | https://github.com/CCPBioSim/CodeEntropy/pull/267 |
| 1278269 | https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits/1278269e507946f26b2c95fe3d3c1ad54d36bfb4 |
|
| https://patch-diff.githubusercontent.com/harryswift01 |
| fix sorting bug in get_vanilla_axes moment of inertia | https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits/658e276327b799df2c436c255e97e33ad2bba9de |
| 658e276 | https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits/658e276327b799df2c436c255e97e33ad2bba9de |
|
| https://patch-diff.githubusercontent.com/harryswift01 |
| reduce tolerance within test_conformational_entropy_calculation | https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits/d4f59240fcd8fad295107c69aded2bd0cc1736ca |
| d4f5924 | https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267/commits/d4f59240fcd8fad295107c69aded2bd0cc1736ca |
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| v1.1.0 | https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/milestone/11 |
| Feb 5, 2026 | https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267#event-22553094227 |
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| jkalayan | https://patch-diff.githubusercontent.com/jkalayan |
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| February 5, 2026 10:05 | https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267#event-22553764430 |
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| harryswift01 | https://patch-diff.githubusercontent.com/harryswift01 |
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Feb 5, 2026
| https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267#pullrequestreview-3756213648 |
|
View reviewed changes
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| Please reload this page | https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267 |
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Conformational Entropy Changes
#235
| https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/issues/235 |
|
Rovibrational Entropy
#178
| https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/issues/178 |
| https://patch-diff.githubusercontent.com/jkalayan |
| jkalayan | https://patch-diff.githubusercontent.com/jkalayan |
| 0418f8b | https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/commit/0418f8b49301e84be4f8cf60701169c281d70b8b |
| Feb 5, 2026 | https://github.com/CCPBioSim/CodeEntropy/pull/267#event-22558868193 |
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| February 5, 2026 13:32 | https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/pull/267#event-22558874705 |
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harryswift01
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skfegan
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jimboid
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jkalayan
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v1.1.0
| https://patch-diff.githubusercontent.com/CCPBioSim/CodeEntropy/milestone/11 |
|
Conformational Entropy Changes
| https://github.com/CCPBioSim/CodeEntropy/issues/235 |
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Rovibrational Entropy
| https://github.com/CCPBioSim/CodeEntropy/issues/178 |
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