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Title: Mass Spectrometry Data Analysis with Spectra • SpectraTutorials

Open Graph Title: Mass Spectrometry Data Analysis with Spectra

Description: These workshops and tutorials provide use cases and examples for mass spectrometry data handling and analysis using the Spectra Bioconductor package and how these can be included into other R-based analyis workflows.

Open Graph Description: These workshops and tutorials provide use cases and examples for mass spectrometry data handling and analysis using the Spectra Bioconductor package and how these can be included into other R-based analyis workflows.

direct link

Domain: jorainer.github.io

NoneIE=edge
og:imagehttps://jorainer.github.io/SpectraTutorials/logo.png

Links:

Skip to contentshttps://jorainer.github.io/SpectraTutorials#main
SpectraTutorialshttps://jorainer.github.io/index.html
Referencehttps://jorainer.github.io/reference/index.html
Seamless Integration of Mass Spectrometry Data from Different Sources with the `Spectra` Packagehttps://jorainer.github.io/articles/analyzing-MS-data-from-different-sources-with-Spectra.html
Spectra: an expandable infrastructure to handle mass spectrometry datahttps://jorainer.github.io/articles/Spectra-backends.html
MS/MS Spectra Matching with the `MetaboAnnotation` Packagehttps://jorainer.github.io/articles/Spectra-matching-with-MetaboAnnotation.html
Changeloghttps://jorainer.github.io/news/index.html
https://github.com/jorainer/SpectraTutorials/
https://jorainer.github.io/SpectraTutorials#mass-spectrometry-data-analysis-with-spectra
https://creativecommons.org/licenses/by-nc/4.0/
https://hub.docker.com/repository/docker/jorainer/spectra_tutorials
https://zenodo.org/doi/10.5281/zenodo.11210189
Spectrahttps://bioconductor.org/packages/Spectra
NEWS.mdhttps://jorainer.github.io/NEWS.html
https://jorainer.github.io/SpectraTutorials#citation
Zenodohttps://zenodo.org
https://doi.org/10.5281/zenodo.11210190https://doi.org/10.5281/zenodo.11210190
https://jorainer.github.io/SpectraTutorials#installation
SpectraTutorialshttps://jorainer.github.io/SpectraTutorials
docker imagehttps://hub.docker.com/r/jorainer/spectra_tutorials
https://jorainer.github.io/SpectraTutorials#workshopstutorials
https://jorainer.github.io/SpectraTutorials#seamless-integration-of-mass-spectrometry-data-from-different-sources
rendered versionhttps://jorainer.github.io/SpectraTutorials/articles/analyzing-MS-data-from-different-sources-with-Spectra.html
https://jorainer.github.io/SpectraTutorials#short-description
Spectrahttps://bioconductor.org/packages/Spectra
https://jorainer.github.io/SpectraTutorials#description
workshophttps://jorainer.github.io/SpectraTutorials/articles/analyzing-MS-data-from-different-sources-with-Spectra.html
BioC2021https://bioc2021.bioconductor.org/
herehttps://youtu.be/CNvqlK3Wgx4
EuroBioc2020https://eurobioc2020.bioconductor.org/
herehttps://www.youtube.com/watch?v=W6JISCrAtk0
https://jorainer.github.io/SpectraTutorials#workshop-goals-and-objectives
https://jorainer.github.io/SpectraTutorials#learning-goals
https://jorainer.github.io/SpectraTutorials#learning-objectives
https://jorainer.github.io/SpectraTutorials#pre-requisites
https://jorainer.github.io/SpectraTutorials#rbioconductor-packages-used
Spectrahttps://bioconductor.org/packages/Spectra
MsCoreUtilshttps://bioconductor.org/packages/MsCoreUtils
MsBackendMgfhttps://bioconductor.org/packages/MsBackendMgf
MsBackendMassbankhttps://bioconductor.org/packages/MsBackendMassbank
CompoundDbhttps://bioconductor.org/packages/CompoundDb
https://jorainer.github.io/SpectraTutorials#spectra-an-expandable-infrastructure-to-handle-mass-spectrometry-data
rendered versionhttps://jorainer.github.io/SpectraTutorials/articles/Spectra-backends.html
https://jorainer.github.io/SpectraTutorials#short-description-1
Spectrahttps://bioconductor.org/packages/Spectra
https://jorainer.github.io/SpectraTutorials#description-1
https://jorainer.github.io/SpectraTutorials#pre-requisites-1
https://jorainer.github.io/SpectraTutorials#rbioconductor-packages-used-1
Spectrahttps://bioconductor.org/packages/Spectra
MsBackendSqlhttps://bioconductor.org/packages/MsBackendSql
https://jorainer.github.io/SpectraTutorials#workshop-goals-and-objectives-1
https://jorainer.github.io/SpectraTutorials#learning-goals-1
https://jorainer.github.io/SpectraTutorials#learning-objectives-1
https://jorainer.github.io/SpectraTutorials#msms-spectra-matching-with-the-metaboannotation-package
rendered versionhttps://jorainer.github.io/SpectraTutorials/articles/Spectra-matching-with-MetaboAnnotation.html
Spectrahttps://bioconductor.org/packages/Spectra
MetaboAnnotationhttps://bioconductor.org/packages/MetaboAnnotation
MetaboAnnotationTutorialshttps://jorainer.github.io/MetaboAnnotationTutorials
https://jorainer.github.io/SpectraTutorials#contribution
RforMassSpectrometry contributions guidelinehttps://rformassspectrometry.github.io/RforMassSpectrometry/articles/RforMassSpectrometry.html#contributions
https://jorainer.github.io/SpectraTutorials#code-of-conduct
RforMassSpectrometry Code of Conducthttps://rformassspectrometry.github.io/RforMassSpectrometry/articles/RforMassSpectrometry.html#code-of-conduct
https://jorainer.github.io/SpectraTutorials#acknowledgments
Philippine Louailhttps://github.com/philouail
Browse source codehttps://github.com/jorainer/SpectraTutorials/
Report a bughttps://github.com/jorainer/SpectraTutorials/issues/new
Artistic-2.0https://www.r-project.org/Licenses/Artistic-2.0
Citing SpectraTutorialshttps://jorainer.github.io/authors.html#citation
https://orcid.org/0000-0002-6977-7147
https://orcid.org/0000-0002-1462-4426
https://orcid.org/0000-0002-1520-2268
https://orcid.org/0000-0001-7406-4443
More about authors...https://jorainer.github.io/authors.html
pkgdownhttps://pkgdown.r-lib.org/

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