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Title: Read Matrix Market with `fast_matrix_market` by eriknw · Pull Request #391 · python-graphblas/python-graphblas · GitHub

Open Graph Title: Read Matrix Market with `fast_matrix_market` by eriknw · Pull Request #391 · python-graphblas/python-graphblas

X Title: Read Matrix Market with `fast_matrix_market` by eriknw · Pull Request #391 · python-graphblas/python-graphblas

Description: Closes #384. This uses fast_matrix_market (which looks pretty fast) by default if available, but will fall back to scipy if necessary. scipy is still necessary to be installed even if using "fast_m...

Open Graph Description: Closes #384. This uses fast_matrix_market (which looks pretty fast) by default if available, but will fall back to scipy if necessary. scipy is still necessary to be installed even if using "f...

X Description: Closes #384. This uses fast_matrix_market (which looks pretty fast) by default if available, but will fall back to scipy if necessary. scipy is still necessary to be installed even if using &qu...

Opengraph URL: https://github.com/python-graphblas/python-graphblas/pull/391

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og:image:altCloses #384. This uses fast_matrix_market (which looks pretty fast) by default if available, but will fall back to scipy if necessary. scipy is still necessary to be installed even if using "f...
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Read Matrix Market with fast_matrix_market https://github.com/python-graphblas/python-graphblas/pull/391#top
eriknwhttps://github.com/eriknw
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Feb 18, 2023https://github.com/python-graphblas/python-graphblas/pull/391#issue-1590488428
Please reload this pagehttps://github.com/python-graphblas/python-graphblas/pull/391
#384https://github.com/python-graphblas/python-graphblas/issues/384
pretty fasthttps://github.com/alugowski/fast_matrix_market
https://python-graphblas.readthedocs.io/en/latest/user_guide/io.htmlhttps://python-graphblas.readthedocs.io/en/latest/user_guide/io.html
from_dense/to_densehttps://github.com/python-graphblas/python-graphblas/pull/382
Please reload this pagehttps://github.com/python-graphblas/python-graphblas/pull/391
https://github.com/eriknw
Read Matrix Market with fast_matrix_markethttps://github.com/python-graphblas/python-graphblas/pull/391/commits/e458cadb01fb1c57cdf01161472c1cf832edce18
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Feb 18, 2023https://github.com/python-graphblas/python-graphblas/pull/391#issuecomment-1435784830
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Please reload this pagehttps://github.com/python-graphblas/python-graphblas/pull/391
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eriknwhttps://github.com/eriknw
Feb 19, 2023https://github.com/python-graphblas/python-graphblas/pull/391#issuecomment-1435836286
@alugowskihttps://github.com/alugowski
fmm.mmread(stream) closes stream (scipy.io.mmread(stream) does not) alugowski/fast_matrix_market#9https://github.com/alugowski/fast_matrix_market/issues/9
Is this a valid Matrix Market format? alugowski/fast_matrix_market#10https://github.com/alugowski/fast_matrix_market/issues/10
fmm.mmread raises ValueError instead of OverflowError when reading integers that are too large alugowski/fast_matrix_market#11https://github.com/alugowski/fast_matrix_market/issues/11
@alugowskihttps://github.com/alugowski
Please reload this pagehttps://github.com/python-graphblas/python-graphblas/pull/391
eriknwhttps://github.com/eriknw
February 19, 2023 05:06https://github.com/python-graphblas/python-graphblas/pull/391#commits-pushed-8795df1
https://github.com/eriknw
oops print statementhttps://github.com/python-graphblas/python-graphblas/pull/391/commits/8795df1eb171aa689729ef92c77dec4f88a7a722
8795df1https://github.com/python-graphblas/python-graphblas/pull/391/commits/8795df1eb171aa689729ef92c77dec4f88a7a722
https://github.com/eriknw
Merge branch 'main' into fast-matrix-markethttps://github.com/python-graphblas/python-graphblas/pull/391/commits/44783db25136db9eb3e7106351befd673f18f245
44783dbhttps://github.com/python-graphblas/python-graphblas/pull/391/commits/44783db25136db9eb3e7106351befd673f18f245
https://github.com/eriknw
Merge branch 'main' into fast-matrix-markethttps://github.com/python-graphblas/python-graphblas/pull/391/commits/c009b8cf3aa851419ab48adaece1b853430fa08f
c009b8chttps://github.com/python-graphblas/python-graphblas/pull/391/commits/c009b8cf3aa851419ab48adaece1b853430fa08f
https://github.com/eriknw
Merge branch 'main' into fast-matrix-markethttps://github.com/python-graphblas/python-graphblas/pull/391/commits/e18210ca1f8cc7fba61ff331fc088438a9f7eb82
e18210chttps://github.com/python-graphblas/python-graphblas/pull/391/commits/e18210ca1f8cc7fba61ff331fc088438a9f7eb82
https://github.com/eriknw
Update usage of from_dense and to_dense in docs and notebookshttps://github.com/python-graphblas/python-graphblas/pull/391/commits/faaf1c7b42f87f1a37783ee703ca772407dcd5a5
faaf1c7https://github.com/python-graphblas/python-graphblas/pull/391/commits/faaf1c7b42f87f1a37783ee703ca772407dcd5a5
https://github.com/eriknw
Ignore warning from new version of pydata/sparse (we should investiga…https://github.com/python-graphblas/python-graphblas/pull/391/commits/00c653969013636824ce34c96ea79b38f7297d37
00c6539https://github.com/python-graphblas/python-graphblas/pull/391/commits/00c653969013636824ce34c96ea79b38f7297d37
https://github.com/eriknw
to_pydata_sparse(v) on Vector should create 1-d arrayhttps://github.com/python-graphblas/python-graphblas/pull/391/commits/632ebefebcdf32837d7de30577a057039e1ac43d
632ebefhttps://github.com/python-graphblas/python-graphblas/pull/391/commits/632ebefebcdf32837d7de30577a057039e1ac43d
https://github.com/eriknw
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Feb 25, 2023 https://github.com/python-graphblas/python-graphblas/pull/391#pullrequestreview-1314521868
View reviewed changes https://github.com/python-graphblas/python-graphblas/pull/391/files/632ebefebcdf32837d7de30577a057039e1ac43d
graphblas/io.pyhttps://github.com/python-graphblas/python-graphblas/pull/391/files/632ebefebcdf32837d7de30577a057039e1ac43d#diff-a6c7285f163a239cc3a2596b1627c3446bdffa4b601f8f8512e722c73cddc505
eriknwhttps://github.com/eriknw
Feb 25, 2023https://github.com/python-graphblas/python-graphblas/pull/391#discussion_r1117924833
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Please reload this pagehttps://github.com/python-graphblas/python-graphblas/pull/391
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Feb 28, 2023https://github.com/python-graphblas/python-graphblas/pull/391#discussion_r1119610169
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Please reload this pagehttps://github.com/python-graphblas/python-graphblas/pull/391
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eriknwhttps://github.com/eriknw
Feb 26, 2023 https://github.com/python-graphblas/python-graphblas/pull/391#ref-pullrequest-1600201529
Remove use of from_numpy and misc updates/cleanup #395 https://github.com/python-graphblas/python-graphblas/pull/395
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February 27, 2023 13:20https://github.com/python-graphblas/python-graphblas/pull/391#commits-pushed-89279c5
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Merge branch 'main' into fast-matrix-markethttps://github.com/python-graphblas/python-graphblas/pull/391/commits/89279c5764a58bdca35d308cc91cef56b7d63276
89279c5https://github.com/python-graphblas/python-graphblas/pull/391/commits/89279c5764a58bdca35d308cc91cef56b7d63276
https://github.com/eriknw
ruff 253https://github.com/python-graphblas/python-graphblas/pull/391/commits/64d32a03d7ba77c381b86eea88e2452d73a89f4b
64d32a0https://github.com/python-graphblas/python-graphblas/pull/391/commits/64d32a03d7ba77c381b86eea88e2452d73a89f4b
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Merge branch 'main' into fast-matrix-markethttps://github.com/python-graphblas/python-graphblas/pull/391/commits/decad90719704f471599d22a46e1f939a6c6b902
decad90https://github.com/python-graphblas/python-graphblas/pull/391/commits/decad90719704f471599d22a46e1f939a6c6b902
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Merge branch 'main' into fast-matrix-markethttps://github.com/python-graphblas/python-graphblas/pull/391/commits/f9dd5f8ce67307b53dba403bd7a5fb257ba1b311
f9dd5f8https://github.com/python-graphblas/python-graphblas/pull/391/commits/f9dd5f8ce67307b53dba403bd7a5fb257ba1b311
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bump awkward to 2.1.0https://github.com/python-graphblas/python-graphblas/pull/391/commits/46e0c623a58271814a195c954525d7341658503b
46e0c62https://github.com/python-graphblas/python-graphblas/pull/391/commits/46e0c623a58271814a195c954525d7341658503b
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Merge branch 'main' into fast-matrix-markethttps://github.com/python-graphblas/python-graphblas/pull/391/commits/0c1a1a876c426c4da528e48b2c15dd387e04a8f6
0c1a1a8https://github.com/python-graphblas/python-graphblas/pull/391/commits/0c1a1a876c426c4da528e48b2c15dd387e04a8f6
https://github.com/eriknw
Maybe trust ruff to fix some thingshttps://github.com/python-graphblas/python-graphblas/pull/391/commits/2faf4996f2713fd7f58d04ad5fb8f8950eff5d5e
2faf499https://github.com/python-graphblas/python-graphblas/pull/391/commits/2faf4996f2713fd7f58d04ad5fb8f8950eff5d5e
https://github.com/eriknw
Add a few notes to pre-commit hookshttps://github.com/python-graphblas/python-graphblas/pull/391/commits/b0544d8e75c5705d634f35a62b4c1487adf9ad38
b0544d8https://github.com/python-graphblas/python-graphblas/pull/391/commits/b0544d8e75c5705d634f35a62b4c1487adf9ad38
https://github.com/eriknw
Add fast-matrix-market to optional dependencies documentationhttps://github.com/python-graphblas/python-graphblas/pull/391/commits/5969089c9c77987b2a98bfbd4c32e90183f135f9
5969089https://github.com/python-graphblas/python-graphblas/pull/391/commits/5969089c9c77987b2a98bfbd4c32e90183f135f9
https://github.com/eriknw
Drop autoflake in pre-commit (use ruff instead)https://github.com/python-graphblas/python-graphblas/pull/391/commits/d9ceebcf1214e0e96663b91c6a89ec42bdf1fd55
d9ceebchttps://github.com/python-graphblas/python-graphblas/pull/391/commits/d9ceebcf1214e0e96663b91c6a89ec42bdf1fd55
https://github.com/eriknw
bumphttps://github.com/python-graphblas/python-graphblas/pull/391/commits/47c9bdfda0b0e191f0187a284ef6450d8ae6d3c4
47c9bdfhttps://github.com/python-graphblas/python-graphblas/pull/391/commits/47c9bdfda0b0e191f0187a284ef6450d8ae6d3c4
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bump ruffhttps://github.com/python-graphblas/python-graphblas/pull/391/commits/7bf394d240940d3403cc66b52a108044031b78e9
7bf394dhttps://github.com/python-graphblas/python-graphblas/pull/391/commits/7bf394d240940d3403cc66b52a108044031b78e9
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Mar 20, 2023 https://github.com/python-graphblas/python-graphblas/pull/391#pullrequestreview-1347929849
View reviewed changes https://github.com/python-graphblas/python-graphblas/pull/391/files/7bf394d240940d3403cc66b52a108044031b78e9
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graphblas/io.pyhttps://github.com/python-graphblas/python-graphblas/pull/391/files/7bf394d240940d3403cc66b52a108044031b78e9#diff-a6c7285f163a239cc3a2596b1627c3446bdffa4b601f8f8512e722c73cddc505
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Note that scipy is needed for all backends for mmread and mmwritehttps://github.com/python-graphblas/python-graphblas/pull/391/commits/eb60ec56dd03cc272a8b86b60c998926b6799964
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Mar 21, 2023 https://github.com/python-graphblas/python-graphblas/pull/391#pullrequestreview-1349715459
View reviewed changes https://github.com/python-graphblas/python-graphblas/pull/391/files/eb60ec56dd03cc272a8b86b60c998926b6799964
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Mar 21, 2023 https://github.com/python-graphblas/python-graphblas/pull/391#ref-issue-1633262342
Utility to check for required imports and raise importerror #411 https://github.com/python-graphblas/python-graphblas/issues/411
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Add Matrix Market to io docshttps://github.com/python-graphblas/python-graphblas/pull/391/commits/00045205c6d9c0611263fd3ecd0bc1670c6e7de1
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Mar 22, 2023https://github.com/python-graphblas/python-graphblas/pull/391#event-8818105678
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Option to read MatrixMarket with fast_matrix_market https://github.com/python-graphblas/python-graphblas/issues/384
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