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Title: PracticalPythonProgrammingForBiologists/README.md at main · passdan/PracticalPythonProgrammingForBiologists · GitHub

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Description: An introduction to python programming for Biologists and Bioinformaticians - PracticalPythonProgrammingForBiologists/README.md at main · passdan/PracticalPythonProgrammingForBiologists

Open Graph Description: An introduction to python programming for Biologists and Bioinformaticians - passdan/PracticalPythonProgrammingForBiologists

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	https://github.com/passdan/PracticalPythonProgrammingForBiologists/blob/main/README.md#course-design
	https://github.com/passdan/PracticalPythonProgrammingForBiologists/blob/main/README.md#schedule
	https://github.com/passdan/PracticalPythonProgrammingForBiologists/blob/main/README.md#day-1
Setting up the python environment	https://github.com/passdan/PracticalPythonProgrammingForBiologists/blob/main/Supplementary/Setting_up.ipynb
Introduction, concepts, & data types	https://github.com/passdan/PracticalPythonProgrammingForBiologists/blob/main/Day1/P34B-Day1-Introduction.ipynb
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	https://github.com/passdan/PracticalPythonProgrammingForBiologists/blob/main/README.md#day-2
More Data Types: Dictionaries	https://github.com/passdan/PracticalPythonProgrammingForBiologists/blob/main/Day2/P34B-Day1-Dictionaries.ipynb
Loops	https://github.com/passdan/PracticalPythonProgrammingForBiologists/blob/main/Day2/P34B-Day2-Loops.ipynb
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	https://github.com/passdan/PracticalPythonProgrammingForBiologists/blob/main/README.md#day-3
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Modules and libraries: BioPython	https://github.com/passdan/PracticalPythonProgrammingForBiologists/blob/main/Day3/P34B-Day3-Modules-Biopython.ipynb
Organising code with functions	https://github.com/passdan/PracticalPythonProgrammingForBiologists/blob/main/Day3/P34B-Day3-Functions.ipynb
Project: Chipseq, bespoke file formats, and functional organisation	https://github.com/passdan/PracticalPythonProgrammingForBiologists/blob/main/Day3/P34B-Day3-Project-ChipSeq.ipynb
	https://github.com/passdan/PracticalPythonProgrammingForBiologists/blob/main/README.md#day-4
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Data visualisation packages (matplotlib/seaborn/plotly)	https://github.com/passdan/PracticalPythonProgrammingForBiologists/blob/main/Day4/P34B-Day4-Data_visualisation.ipynb
Your code as command line programs & argparse	https://github.com/passdan/PracticalPythonProgrammingForBiologists/blob/main/Day4/P34B-Day3-CLI_and_argparse.ipynb
Future Directions	https://github.com/passdan/PracticalPythonProgrammingForBiologists/blob/main/Supplementary/P34B-FutureDirections.md
Project: objects and stats - viral genomics	https://github.com/passdan/PracticalPythonProgrammingForBiologists/blob/main/Day3/P34B-Day3-Project-covid_modules.ipynb
	https://github.com/passdan/PracticalPythonProgrammingForBiologists/blob/main/README.md#supplementary
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Data Types Review	https://github.com/passdan/PracticalPythonProgrammingForBiologists/blob/main/Supplementary/P34B-DataTypes-review.ipynb
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