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Title: DeepPATH/DeepPATH_code at master · p140748/DeepPATH · GitHub

Open Graph Title: DeepPATH/DeepPATH_code at master · p140748/DeepPATH

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Description: Classification of Lung cancer slide images using deep-learning - DeepPATH/DeepPATH_code at master · p140748/DeepPATH

Open Graph Description: Classification of Lung cancer slide images using deep-learning - p140748/DeepPATH

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DeepPATHhttps://github.com/p140748/DeepPATH/tree/master
..https://github.com/p140748/DeepPATH/tree/master
00_preprocessinghttps://github.com/p140748/DeepPATH/tree/master/DeepPATH_code/00_preprocessing
00_preprocessinghttps://github.com/p140748/DeepPATH/tree/master/DeepPATH_code/00_preprocessing
01_traininghttps://github.com/p140748/DeepPATH/tree/master/DeepPATH_code/01_training
01_traininghttps://github.com/p140748/DeepPATH/tree/master/DeepPATH_code/01_training
02_testinghttps://github.com/p140748/DeepPATH/tree/master/DeepPATH_code/02_testing
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README.mdhttps://github.com/p140748/DeepPATH/blob/master/DeepPATH_code/README.md
README.mdhttps://github.com/p140748/DeepPATH/blob/master/DeepPATH_code/README.md
README.mdhttps://github.com/p140748/DeepPATH/tree/master/DeepPATH_code#readme
https://www.nature.com/articles/s41591-018-0177-5https://www.nature.com/articles/s41591-018-0177-5
Inception v3https://github.com/tensorflow/models/blob/f87a58cd96d45de73c9a8330a06b2ab56749a7fa/research/inception/README.md
http://arxiv.org/abs/1512.00567http://arxiv.org/abs/1512.00567
https://github.com/p140748/DeepPATH/tree/master/DeepPATH_code#0---prepare-the-images
https://github.com/p140748/DeepPATH/tree/master/DeepPATH_code#01-tile-the-svs-slide-images
https://github.com/p140748/DeepPATH/tree/master/DeepPATH_code#02-sort-the-tiles-into-trainvalidtest-sets-according-to-the-classes-defined
https://github.com/p140748/DeepPATH/tree/master/DeepPATH_code#03a-convert-the-jpeg-tiles-into-tfrecord-format-for-2-or-3-classes-jobs
awslabs' deeplearning-benchmark codehttps://github.com/awslabs/deeplearning-benchmark/blob/master/tensorflow/inception/inception/data/build_image_data.py
https://github.com/p140748/DeepPATH/tree/master/DeepPATH_code#03b-convert-the-jpeg-tiles-into-tfrecord-format-for-a-multi-ouput-prediction-example-mutations
https://github.com/p140748/DeepPATH/tree/master/DeepPATH_code#note-on-mutation-file
https://github.com/p140748/DeepPATH/tree/master/DeepPATH_code#1---training
https://github.com/p140748/DeepPATH/tree/master/DeepPATH_code#11---training-from-scratch
https://github.com/p140748/DeepPATH/tree/master/DeepPATH_code#11a-build-the-model
https://github.com/p140748/DeepPATH/tree/master/DeepPATH_code#11b-train-the-model
https://github.com/p140748/DeepPATH/tree/master/DeepPATH_code#12---transfer-learning
inception v3 github pagehttps://github.com/tensorflow/models/tree/f87a58cd96d45de73c9a8330a06b2ab56749a7fa/research/inception#adjusting-memory-demands
https://github.com/p140748/DeepPATH/tree/master/DeepPATH_code#13-validation
https://github.com/p140748/DeepPATH/tree/master/DeepPATH_code#13a-validations-accuracy-not-used-anymore---go-13b
https://github.com/p140748/DeepPATH/tree/master/DeepPATH_code#13b-validations-auc
https://github.com/p140748/DeepPATH/tree/master/DeepPATH_code#14-comments-on-the-code
https://github.com/tensorflow/models/tree/master/inceptionhttps://github.com/tensorflow/models/tree/master/inception
https://github.com/p140748/DeepPATH/tree/master/DeepPATH_code#2---run-the-classification-on-the-test-images
https://github.com/p140748/DeepPATH/tree/master/DeepPATH_code#3---analyze-the-outcome
https://github.com/p140748/DeepPATH/tree/master/DeepPATH_code#generate-heat-maps-per-slides-all-test-slides-in-a-given-folder-code-not-optimized-and-slow
https://github.com/p140748/DeepPATH/tree/master/DeepPATH_code#code-for-roc-curves
https://github.com/p140748/DeepPATH/tree/master/DeepPATH_code#code-in-03_postprocessingmulticlasses-for--probability-distributions-mutation-analysis
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