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Title: GitHub - feiglab/ProteinStructureEmbedding · GitHub

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ProteinStructureEmbedding	https://github.com/feiglab/ProteinStructureEmbedding
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222 Commits	https://github.com/feiglab/ProteinStructureEmbedding/commits/main/
	https://github.com/feiglab/ProteinStructureEmbedding/commits/main/
models	https://github.com/feiglab/ProteinStructureEmbedding/tree/main/models
models	https://github.com/feiglab/ProteinStructureEmbedding/tree/main/models
pKa-datasets	https://github.com/feiglab/ProteinStructureEmbedding/tree/main/pKa-datasets
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src	https://github.com/feiglab/ProteinStructureEmbedding/tree/main/src
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README.md	https://github.com/feiglab/ProteinStructureEmbedding/blob/main/README.md
requirements.txt	https://github.com/feiglab/ProteinStructureEmbedding/blob/main/requirements.txt
requirements.txt	https://github.com/feiglab/ProteinStructureEmbedding/blob/main/requirements.txt
README	https://github.com/feiglab/ProteinStructureEmbedding
	https://github.com/feiglab/ProteinStructureEmbedding#accurate-predictions-of-molecular-properties-of-proteins-via-graph-neural-networks-and-transfer-learning
	https://github.com/feiglab/ProteinStructureEmbedding#overview
	https://github.com/feiglab/ProteinStructureEmbedding#graph-neural-network-based-prediction
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GSnet	https://github.com/feiglab/ProteinStructureEmbedding#gsnet
aLCnet	https://github.com/feiglab/ProteinStructureEmbedding#alcnet
transfer learning	https://en.wikipedia.org/wiki/Transfer_learning
	https://github.com/feiglab/ProteinStructureEmbedding#gsnet
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Accurate Predictions of Molecular Properties of Proteins via Graph Neural Networks and Transfer Learning	https://doi.org/10.1021/acs.jctc.4c01682
Installation	https://github.com/feiglab/ProteinStructureEmbedding#installation
Making Predictions	https://github.com/feiglab/ProteinStructureEmbedding#making-predictions
Plotting predictions	https://github.com/feiglab/ProteinStructureEmbedding#plotting-predictions
Pretrained Models	https://github.com/feiglab/ProteinStructureEmbedding#pretrained-models
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GSnet Dataset	https://github.com/feiglab/ProteinStructureEmbedding#gsnet-dataset
aLCnet Dataset	https://github.com/feiglab/ProteinStructureEmbedding#alcnet-dataset
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	https://github.com/feiglab/ProteinStructureEmbedding#notes-1
	https://github.com/feiglab/ProteinStructureEmbedding#training-a-model
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	https://github.com/feiglab/ProteinStructureEmbedding#how-to-reproduce-data-and-figures-from-the-paper
Installation	https://github.com/feiglab/ProteinStructureEmbedding#installation
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	https://github.com/feiglab/ProteinStructureEmbedding#more-info
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