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Title: Fix #703: Recover from empty structure files in PDB_CACHE_DIR by sbliven · Pull Request #774 · biojava/biojava · GitHub

Open Graph Title: Fix #703: Recover from empty structure files in PDB_CACHE_DIR by sbliven · Pull Request #774 · biojava/biojava

X Title: Fix #703: Recover from empty structure files in PDB_CACHE_DIR by sbliven · Pull Request #774 · biojava/biojava

Description: For a short period the ChemComp files didn't resolve, resulting in empty files getting cached by BioJava. The caching problem has been long fixed, but this PR should make it so BioJava can recover ...

Open Graph Description: For a short period the ChemComp files didn't resolve, resulting in empty files getting cached by BioJava. The caching problem has been long fixed, but this PR should make it so BioJava can reco...

X Description: For a short period the ChemComp files didn't resolve, resulting in empty files getting cached by BioJava. The caching problem has been long fixed, but this PR should make it so BioJava can ...

Opengraph URL: https://github.com/biojava/biojava/pull/774

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Support initial comments in MMCif files (e.g. those generated by PyMOL)https://github.com/biojava/biojava/pull/774/commits/c3cec9187eae380878a462495cbb98dbfdcdce5e
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Re-download empty structure or chemical component structureshttps://github.com/biojava/biojava/pull/774/commits/6ea9ae762946efe87998e4ccca16f70b738087ce
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_atom_site.auth_seq_id:http://mmcif.wwpdb.org/dictionaries/mmcif_pdbx_v50.dic/Items/_atom_site.auth_seq_id.html
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Add GlobalsHelper class to manage our global statehttps://github.com/biojava/biojava/pull/774/commits/13f267c322d05de3aaa04e8daaebc4e5940529ff
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Fix NullPointer when restoring global statehttps://github.com/biojava/biojava/pull/774/commits/c1c3c30516ea89d66fc71a0c7464b1c57eec58c1
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MMCif behavior when auth_seq_id is missing #775 https://github.com/biojava/biojava/issues/775
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Fix test failure due to PDB changehttps://github.com/biojava/biojava/pull/774/commits/0c10a2ef58553bcf7d703caed340d7634a28ac3d
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Revert fix for mmcif files without auth_seq_id columnhttps://github.com/biojava/biojava/pull/774/commits/08ab3e11827b74158fb82fbcf26964cea34d9594
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