René's URL Explorer Experiment


Title: Javadoc errors cleanup by josemduarte · Pull Request #1104 · biojava/biojava · GitHub

Open Graph Title: Javadoc errors cleanup by josemduarte · Pull Request #1104 · biojava/biojava

X Title: Javadoc errors cleanup by josemduarte · Pull Request #1104 · biojava/biojava

Description: FYI, I'll merge it. I'll see if I can introduce javadoc linting in CI to avoid any new errors coming in.

Open Graph Description: FYI, I'll merge it. I'll see if I can introduce javadoc linting in CI to avoid any new errors coming in.

X Description: FYI, I'll merge it. I'll see if I can introduce javadoc linting in CI to avoid any new errors coming in.

Opengraph URL: https://github.com/biojava/biojava/pull/1104

X: @github

direct link

Domain: github.com

route-pattern/_view_fragments/voltron/pull_requests/show/:user_id/:repository/:id/pull_request_layout(.:format)
route-controllervoltron_pull_requests_fragments
route-actionpull_request_layout
fetch-noncev2:65d18f12-a7cd-acca-89b0-b45aea07303f
current-catalog-service-hashae870bc5e265a340912cde392f23dad3671a0a881730ffdadd82f2f57d81641b
request-idD618:2641E2:2489343:2F0984A:6974B719
html-safe-noncea44d4cc457f16c7e885ca1dfdfdb4f50e8fc895103e1ec6c934bbb2822f3f183
visitor-payloadeyJyZWZlcnJlciI6IiIsInJlcXVlc3RfaWQiOiJENjE4OjI2NDFFMjoyNDg5MzQzOjJGMDk4NEE6Njk3NEI3MTkiLCJ2aXNpdG9yX2lkIjoiMTEyOTI3OTQwNzkyMzcwNTYyNSIsInJlZ2lvbl9lZGdlIjoiaWFkIiwicmVnaW9uX3JlbmRlciI6ImlhZCJ9
visitor-hmacb094d16b1b6caafa8b556900d2b027a76d785ff38d54b371b570cff9c2fce916
hovercard-subject-tagpull_request:2264863838
github-keyboard-shortcutsrepository,pull-request-list,pull-request-conversation,pull-request-files-changed,copilot
google-site-verificationApib7-x98H0j5cPqHWwSMm6dNU4GmODRoqxLiDzdx9I
octolytics-urlhttps://collector.github.com/github/collect
analytics-location///voltron/pull_requests_fragments/pull_request_layout
fb:app_id1401488693436528
apple-itunes-appapp-id=1477376905, app-argument=https://github.com/_view_fragments/voltron/pull_requests/show/biojava/biojava/1104/pull_request_layout
twitter:imagehttps://opengraph.githubassets.com/ec2107f78deb5dcbe245b84a073cfa91ee054a2c6a2109dd2eb97213778df50a/biojava/biojava/pull/1104
twitter:cardsummary_large_image
og:imagehttps://opengraph.githubassets.com/ec2107f78deb5dcbe245b84a073cfa91ee054a2c6a2109dd2eb97213778df50a/biojava/biojava/pull/1104
og:image:altFYI, I'll merge it. I'll see if I can introduce javadoc linting in CI to avoid any new errors coming in.
og:image:width1200
og:image:height600
og:site_nameGitHub
og:typeobject
og:author:usernamejosemduarte
hostnamegithub.com
expected-hostnamegithub.com
None4a4bf5f4e28041a9d2e5c107d7d20b78b4294ba261cab243b28167c16a623a1f
turbo-cache-controlno-preview
go-importgithub.com/biojava/biojava git https://github.com/biojava/biojava.git
octolytics-dimension-user_id237402
octolytics-dimension-user_loginbiojava
octolytics-dimension-repository_id9199359
octolytics-dimension-repository_nwobiojava/biojava
octolytics-dimension-repository_publictrue
octolytics-dimension-repository_is_forkfalse
octolytics-dimension-repository_network_root_id9199359
octolytics-dimension-repository_network_root_nwobiojava/biojava
turbo-body-classeslogged-out env-production page-responsive
disable-turbofalse
browser-stats-urlhttps://api.github.com/_private/browser/stats
browser-errors-urlhttps://api.github.com/_private/browser/errors
release488b30e96dfd057fbbe44c6665ccbc030b729dde
ui-targetfull
theme-color#1e2327
color-schemelight dark

Links:

Skip to contenthttps://github.com/biojava/biojava/pull/1104#start-of-content
https://github.com/
Sign in https://github.com/login?return_to=https%3A%2F%2Fgithub.com%2Fbiojava%2Fbiojava%2Fpull%2F1104
GitHub CopilotWrite better code with AIhttps://github.com/features/copilot
GitHub SparkBuild and deploy intelligent appshttps://github.com/features/spark
GitHub ModelsManage and compare promptshttps://github.com/features/models
MCP RegistryNewIntegrate external toolshttps://github.com/mcp
ActionsAutomate any workflowhttps://github.com/features/actions
CodespacesInstant dev environmentshttps://github.com/features/codespaces
IssuesPlan and track workhttps://github.com/features/issues
Code ReviewManage code changeshttps://github.com/features/code-review
GitHub Advanced SecurityFind and fix vulnerabilitieshttps://github.com/security/advanced-security
Code securitySecure your code as you buildhttps://github.com/security/advanced-security/code-security
Secret protectionStop leaks before they starthttps://github.com/security/advanced-security/secret-protection
Why GitHubhttps://github.com/why-github
Documentationhttps://docs.github.com
Bloghttps://github.blog
Changeloghttps://github.blog/changelog
Marketplacehttps://github.com/marketplace
View all featureshttps://github.com/features
Enterpriseshttps://github.com/enterprise
Small and medium teamshttps://github.com/team
Startupshttps://github.com/enterprise/startups
Nonprofitshttps://github.com/solutions/industry/nonprofits
App Modernizationhttps://github.com/solutions/use-case/app-modernization
DevSecOpshttps://github.com/solutions/use-case/devsecops
DevOpshttps://github.com/solutions/use-case/devops
CI/CDhttps://github.com/solutions/use-case/ci-cd
View all use caseshttps://github.com/solutions/use-case
Healthcarehttps://github.com/solutions/industry/healthcare
Financial serviceshttps://github.com/solutions/industry/financial-services
Manufacturinghttps://github.com/solutions/industry/manufacturing
Governmenthttps://github.com/solutions/industry/government
View all industrieshttps://github.com/solutions/industry
View all solutionshttps://github.com/solutions
AIhttps://github.com/resources/articles?topic=ai
Software Developmenthttps://github.com/resources/articles?topic=software-development
DevOpshttps://github.com/resources/articles?topic=devops
Securityhttps://github.com/resources/articles?topic=security
View all topicshttps://github.com/resources/articles
Customer storieshttps://github.com/customer-stories
Events & webinarshttps://github.com/resources/events
Ebooks & reportshttps://github.com/resources/whitepapers
Business insightshttps://github.com/solutions/executive-insights
GitHub Skillshttps://skills.github.com
Documentationhttps://docs.github.com
Customer supporthttps://support.github.com
Community forumhttps://github.com/orgs/community/discussions
Trust centerhttps://github.com/trust-center
Partnershttps://github.com/partners
GitHub SponsorsFund open source developershttps://github.com/sponsors
Security Labhttps://securitylab.github.com
Maintainer Communityhttps://maintainers.github.com
Acceleratorhttps://github.com/accelerator
Archive Programhttps://archiveprogram.github.com
Topicshttps://github.com/topics
Trendinghttps://github.com/trending
Collectionshttps://github.com/collections
Enterprise platformAI-powered developer platformhttps://github.com/enterprise
GitHub Advanced SecurityEnterprise-grade security featureshttps://github.com/security/advanced-security
Copilot for BusinessEnterprise-grade AI featureshttps://github.com/features/copilot/copilot-business
Premium SupportEnterprise-grade 24/7 supporthttps://github.com/premium-support
Pricinghttps://github.com/pricing
Search syntax tipshttps://docs.github.com/search-github/github-code-search/understanding-github-code-search-syntax
documentationhttps://docs.github.com/search-github/github-code-search/understanding-github-code-search-syntax
Sign in https://github.com/login?return_to=https%3A%2F%2Fgithub.com%2Fbiojava%2Fbiojava%2Fpull%2F1104
Sign up https://github.com/signup?ref_cta=Sign+up&ref_loc=header+logged+out&ref_page=%2F%3Cuser-name%3E%2F%3Crepo-name%3E%2Fvoltron%2Fpull_requests_fragments%2Fpull_request_layout&source=header-repo&source_repo=biojava%2Fbiojava
Reloadhttps://github.com/biojava/biojava/pull/1104
Reloadhttps://github.com/biojava/biojava/pull/1104
Reloadhttps://github.com/biojava/biojava/pull/1104
biojava https://github.com/biojava
biojavahttps://github.com/biojava/biojava
Notifications https://github.com/login?return_to=%2Fbiojava%2Fbiojava
Fork 395 https://github.com/login?return_to=%2Fbiojava%2Fbiojava
Star 623 https://github.com/login?return_to=%2Fbiojava%2Fbiojava
Code https://github.com/biojava/biojava
Issues 67 https://github.com/biojava/biojava/issues
Pull requests 2 https://github.com/biojava/biojava/pulls
Actions https://github.com/biojava/biojava/actions
Security 0 https://github.com/biojava/biojava/security
Insights https://github.com/biojava/biojava/pulse
Code https://github.com/biojava/biojava
Issues https://github.com/biojava/biojava/issues
Pull requests https://github.com/biojava/biojava/pulls
Actions https://github.com/biojava/biojava/actions
Security https://github.com/biojava/biojava/security
Insights https://github.com/biojava/biojava/pulse
Sign up for GitHub https://github.com/signup?return_to=%2Fbiojava%2Fbiojava%2Fissues%2Fnew%2Fchoose
terms of servicehttps://docs.github.com/terms
privacy statementhttps://docs.github.com/privacy
Sign inhttps://github.com/login?return_to=%2Fbiojava%2Fbiojava%2Fissues%2Fnew%2Fchoose
Jump to bottomhttps://github.com/biojava/biojava/pull/1104#issue-comment-box
josemduartehttps://github.com/josemduarte
masterhttps://github.com/biojava/biojava/tree/master
javadocfixeshttps://github.com/biojava/biojava/tree/javadocfixes
Javadoc errors cleanup https://github.com/biojava/biojava/pull/1104#top
josemduartehttps://github.com/josemduarte
masterhttps://github.com/biojava/biojava/tree/master
javadocfixeshttps://github.com/biojava/biojava/tree/javadocfixes
Conversation 0 https://github.com/biojava/biojava/pull/1104
Commits 24 https://github.com/biojava/biojava/pull/1104/commits
Checks 5 https://github.com/biojava/biojava/pull/1104/checks
Files changed https://github.com/biojava/biojava/pull/1104/files
Please reload this pagehttps://github.com/biojava/biojava/pull/1104
https://github.co/hiddenchars
https://github.com/biojava/biojava/pull/{{ revealButtonHref }}
https://github.com/josemduarte
josemduartehttps://github.com/josemduarte
Jan 7, 2025https://github.com/biojava/biojava/pull/1104#issue-2773927442
Please reload this pagehttps://github.com/biojava/biojava/pull/1104
josemduartehttps://github.com/josemduarte
January 3, 2025 10:45https://github.com/biojava/biojava/pull/1104#commits-pushed-27a88ff
https://github.com/josemduarte
Javadoc fix:

https://github.com/biojava/biojava/pull/1104/commits/27a88ff9780f0c67561b046ad44540f779ff4c02
27a88ffhttps://github.com/biojava/biojava/pull/1104/commits/27a88ff9780f0c67561b046ad44540f779ff4c02
https://github.com/josemduarte
Javadoc fix: param fixeshttps://github.com/biojava/biojava/pull/1104/commits/193287b7bff37997d72da9ab188261667f1b1f21
193287bhttps://github.com/biojava/biojava/pull/1104/commits/193287b7bff37997d72da9ab188261667f1b1f21
https://github.com/josemduarte
Javadoc fix: html-like tag not allowedhttps://github.com/biojava/biojava/pull/1104/commits/d10480957234d8591f79381f962a985aec1a2c74
d104809https://github.com/biojava/biojava/pull/1104/commits/d10480957234d8591f79381f962a985aec1a2c74
https://github.com/josemduarte
Javadoc fix: html escapinghttps://github.com/biojava/biojava/pull/1104/commits/2fab7b03503a48faff1dde8a86254e1b287dd063
2fab7b0https://github.com/biojava/biojava/pull/1104/commits/2fab7b03503a48faff1dde8a86254e1b287dd063
https://github.com/josemduarte
Javadoc fix: bad tagshttps://github.com/biojava/biojava/pull/1104/commits/1c8d58788845e1418b83683734eef997951734c5
1c8d587https://github.com/biojava/biojava/pull/1104/commits/1c8d58788845e1418b83683734eef997951734c5
https://github.com/josemduarte
Javadoc fix: all other errors in core modulehttps://github.com/biojava/biojava/pull/1104/commits/13e3afef7566de8d5662eac8438c3dfa9edefa42
13e3afehttps://github.com/biojava/biojava/pull/1104/commits/13e3afef7566de8d5662eac8438c3dfa9edefa42
https://github.com/josemduarte
Javadoc fix: all error in alignment modulehttps://github.com/biojava/biojava/pull/1104/commits/71fe179011fbd17a04876da57a4e4f49f0845338
71fe179https://github.com/biojava/biojava/pull/1104/commits/71fe179011fbd17a04876da57a4e4f49f0845338
https://github.com/josemduarte
Javadoc fix: a few errors from structure modulehttps://github.com/biojava/biojava/pull/1104/commits/ed7ab8e32d958730568898f733fccd0f0d42273d
ed7ab8ehttps://github.com/biojava/biojava/pull/1104/commits/ed7ab8e32d958730568898f733fccd0f0d42273d
https://github.com/josemduarte
Javadoc fix: some more errors from structure modulehttps://github.com/biojava/biojava/pull/1104/commits/280f2398e7e287c8e3c41d3e09750fb9e0d285d8
280f239https://github.com/biojava/biojava/pull/1104/commits/280f2398e7e287c8e3c41d3e09750fb9e0d285d8
https://github.com/josemduarte
Javadoc fix: some more errors from structure modulehttps://github.com/biojava/biojava/pull/1104/commits/52d10538768889d97e23e5fe245434c956723091
52d1053https://github.com/biojava/biojava/pull/1104/commits/52d10538768889d97e23e5fe245434c956723091
https://github.com/josemduarte
Javadoc fix: many errors in struct align packagehttps://github.com/biojava/biojava/pull/1104/commits/2b33a56bd2fa555c62197ad8f81fff1f46722731
2b33a56https://github.com/biojava/biojava/pull/1104/commits/2b33a56bd2fa555c62197ad8f81fff1f46722731
https://github.com/josemduarte
Javadoc fix: many errors in struct align packagehttps://github.com/biojava/biojava/pull/1104/commits/d2053f30741f1361ab5cf377f8e0da240a7ba59f
d2053f3https://github.com/biojava/biojava/pull/1104/commits/d2053f30741f1361ab5cf377f8e0da240a7ba59f
https://github.com/josemduarte
Javadoc fix: many errors in struct align packagehttps://github.com/biojava/biojava/pull/1104/commits/435ebe98b58bf9cc044dc37414e4ae75a08835b1
435ebe9https://github.com/biojava/biojava/pull/1104/commits/435ebe98b58bf9cc044dc37414e4ae75a08835b1
https://github.com/josemduarte
Javadoc fix: most other errors in structure modulehttps://github.com/biojava/biojava/pull/1104/commits/0c7e9f5fc52f79e942cf1780baafde473b459368
0c7e9f5https://github.com/biojava/biojava/pull/1104/commits/0c7e9f5fc52f79e942cf1780baafde473b459368
https://github.com/josemduarte
Javadoc fix: remaining errors in structure module. Mostly obsolete re…https://github.com/biojava/biojava/pull/1104/commits/2bbc82438cc8aba6dbbfbc362aef4959a0714918
2bbc824https://github.com/biojava/biojava/pull/1104/commits/2bbc82438cc8aba6dbbfbc362aef4959a0714918
https://github.com/josemduarte
Javadoc fix: errors in structure-gui modulehttps://github.com/biojava/biojava/pull/1104/commits/aefa34a52f1c208e3b43d005d5db336052cef900
aefa34ahttps://github.com/biojava/biojava/pull/1104/commits/aefa34a52f1c208e3b43d005d5db336052cef900
https://github.com/josemduarte
Javadoc fix: errors in genome modulehttps://github.com/biojava/biojava/pull/1104/commits/3580f7bac804f3305411a7a9d41bdb47cb836b4e
3580f7bhttps://github.com/biojava/biojava/pull/1104/commits/3580f7bac804f3305411a7a9d41bdb47cb836b4e
https://github.com/josemduarte
Javadoc fix: errors in modfinder modulehttps://github.com/biojava/biojava/pull/1104/commits/bb073294543ce4c4096d0389ab89aad9d33675f2
bb07329https://github.com/biojava/biojava/pull/1104/commits/bb073294543ce4c4096d0389ab89aad9d33675f2
https://github.com/josemduarte
Javadoc fix: errors in ws modulehttps://github.com/biojava/biojava/pull/1104/commits/d483bba04798f62fec44f6a83262a1c74370202e
d483bbahttps://github.com/biojava/biojava/pull/1104/commits/d483bba04798f62fec44f6a83262a1c74370202e
https://github.com/josemduarte
Javadoc fix: errors in protein-disorder modulehttps://github.com/biojava/biojava/pull/1104/commits/0183dc629b76a2632dfdf271462a3a90fbef085b
0183dc6https://github.com/biojava/biojava/pull/1104/commits/0183dc629b76a2632dfdf271462a3a90fbef085b
https://github.com/josemduarte
Javadoc fix: errors in aaprops and survival and moduleshttps://github.com/biojava/biojava/pull/1104/commits/24310c315b565389cae7c4d38f00908c2bedaee7
24310c3https://github.com/biojava/biojava/pull/1104/commits/24310c315b565389cae7c4d38f00908c2bedaee7
https://github.com/josemduarte
Javadoc fix: errors in ontology modulehttps://github.com/biojava/biojava/pull/1104/commits/b55dc80cfba061dcc9e4ca09bdc4f6c5c9137037
b55dc80https://github.com/biojava/biojava/pull/1104/commits/b55dc80cfba061dcc9e4ca09bdc4f6c5c9137037
https://github.com/josemduarte
Javadoc fix: errors in integration-test modulehttps://github.com/biojava/biojava/pull/1104/commits/c3079eaed9fb58e89a8a286f62e919cfbf6dc7de
c3079eahttps://github.com/biojava/biojava/pull/1104/commits/c3079eaed9fb58e89a8a286f62e919cfbf6dc7de
https://github.com/josemduarte
Merge branch 'master' into javadocfixeshttps://github.com/biojava/biojava/pull/1104/commits/48c29b1c3b8ef3020f147beb1d45240d269b33c1
48c29b1https://github.com/biojava/biojava/pull/1104/commits/48c29b1c3b8ef3020f147beb1d45240d269b33c1
https://github.com/josemduarte
josemduartehttps://github.com/josemduarte
e008450https://github.com/biojava/biojava/commit/e0084505e640e611622d502d9970711c01b98a8e
Jan 7, 2025https://github.com/biojava/biojava/pull/1104#event-15845450113
Please reload this pagehttps://github.com/biojava/biojava/pull/1104
Sign up for freehttps://github.com/join?source=comment-repo
Sign in to commenthttps://github.com/login?return_to=https%3A%2F%2Fgithub.com%2Fbiojava%2Fbiojava%2Fpull%2F1104
Please reload this pagehttps://github.com/biojava/biojava/pull/1104
https://github.com/josemduarte
https://github.com/apps/copilot-swe-agent
https://github.com
Termshttps://docs.github.com/site-policy/github-terms/github-terms-of-service
Privacyhttps://docs.github.com/site-policy/privacy-policies/github-privacy-statement
Securityhttps://github.com/security
Statushttps://www.githubstatus.com/
Communityhttps://github.community/
Docshttps://docs.github.com/
Contacthttps://support.github.com?tags=dotcom-footer

Viewport: width=device-width


URLs of crawlers that visited me.