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Title: Tibor by tiborauer · Pull Request #151 · automaticanalysis/automaticanalysis · GitHub

Open Graph Title: Tibor by tiborauer · Pull Request #151 · automaticanalysis/automaticanalysis

X Title: Tibor by tiborauer · Pull Request #151 · automaticanalysis/automaticanalysis

Description: standalone report qsub (+non DCS) diffusion MPM fieldmap RSA - CoSMoMVPA

Open Graph Description: standalone report qsub (+non DCS) diffusion MPM fieldmap RSA - CoSMoMVPA

X Description: standalone report qsub (+non DCS) diffusion MPM fieldmap RSA - CoSMoMVPA

Opengraph URL: https://github.com/automaticanalysis/automaticanalysis/pull/151

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Commits 31 https://github.com/automaticanalysis/automaticanalysis/pull/151/commits
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Jul 20, 2018https://github.com/automaticanalysis/automaticanalysis/pull/151#issue-343048647
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June 23, 2018 02:55https://github.com/automaticanalysis/automaticanalysis/pull/151#commits-pushed-dc3dd45
DEBUG: standalonehttps://github.com/automaticanalysis/automaticanalysis/pull/151/commits/dc3dd4540385d03cb7b9f4f0543e2c8ff1f1fa19
dc3dd45https://github.com/automaticanalysis/automaticanalysis/pull/151/commits/dc3dd4540385d03cb7b9f4f0543e2c8ff1f1fa19
DEBUG: report sessionshttps://github.com/automaticanalysis/automaticanalysis/pull/151/commits/f309e7e2dd7267628ebb1a1dfef496e9b28186ba
f309e7ehttps://github.com/automaticanalysis/automaticanalysis/pull/151/commits/f309e7e2dd7267628ebb1a1dfef496e9b28186ba
DEBUG: standalone contrasts with commentshttps://github.com/automaticanalysis/automaticanalysis/pull/151/commits/d7ff870f18e204e4976d9473416a0334cc6687ac
d7ff870https://github.com/automaticanalysis/automaticanalysis/pull/151/commits/d7ff870f18e204e4976d9473416a0334cc6687ac
DEBUG: diffusion dtifit coreg+normhttps://github.com/automaticanalysis/automaticanalysis/pull/151/commits/fd361bfe826de4f2089fc0a7c619b6a55202b72e
fd361bfhttps://github.com/automaticanalysis/automaticanalysis/pull/151/commits/fd361bfe826de4f2089fc0a7c619b6a55202b72e
DEBUG: diffusion dtifit+reghttps://github.com/automaticanalysis/automaticanalysis/pull/151/commits/9a883aa6ab31906af8ec89a1c222aee10d589b51
9a883aahttps://github.com/automaticanalysis/automaticanalysis/pull/151/commits/9a883aa6ab31906af8ec89a1c222aee10d589b51
UPDATE: typoshttps://github.com/automaticanalysis/automaticanalysis/pull/151/commits/ac27fba48d4b3d1a41345d34ee89da17ae1dda3e
ac27fbahttps://github.com/automaticanalysis/automaticanalysis/pull/151/commits/ac27fba48d4b3d1a41345d34ee89da17ae1dda3e
UPDATE: reduce memory usage if deployedhttps://github.com/automaticanalysis/automaticanalysis/pull/151/commits/8a540807f92e9077cfddb32760e331f0fc542764
8a54080https://github.com/automaticanalysis/automaticanalysis/pull/151/commits/8a540807f92e9077cfddb32760e331f0fc542764
UPDATE: firstlevel model - remove epi output if no residual savedhttps://github.com/automaticanalysis/automaticanalysis/pull/151/commits/ca2c754a1648af0a68247407ec597feb6c0a6b14
ca2c754https://github.com/automaticanalysis/automaticanalysis/pull/151/commits/ca2c754a1648af0a68247407ec597feb6c0a6b14
UPDATE: standalone - save cleanuphttps://github.com/automaticanalysis/automaticanalysis/pull/151/commits/9a5d59d1ed9527d1e932915a4561b353dbc2a7a9
9a5d59dhttps://github.com/automaticanalysis/automaticanalysis/pull/151/commits/9a5d59d1ed9527d1e932915a4561b353dbc2a7a9
DEBUG: remotestreamhttps://github.com/automaticanalysis/automaticanalysis/pull/151/commits/8e931bc5e9b47d5eb6196efbb5aeca475df75435
8e931bchttps://github.com/automaticanalysis/automaticanalysis/pull/151/commits/8e931bc5e9b47d5eb6196efbb5aeca475df75435
NEW FEATURE: standalone versionhttps://github.com/automaticanalysis/automaticanalysis/pull/151/commits/a40b0ca6a2fd45711575bb1f4ea9ab5579bcbc40
a40b0cahttps://github.com/automaticanalysis/automaticanalysis/pull/151/commits/a40b0ca6a2fd45711575bb1f4ea9ab5579bcbc40
https://github.com/tiborauer
UPDATE: connection with (missing) optional streamshttps://github.com/automaticanalysis/automaticanalysis/pull/151/commits/c75084a8a7f9607528ef77fe50a96c86e329d1be
c75084ahttps://github.com/automaticanalysis/automaticanalysis/pull/151/commits/c75084a8a7f9607528ef77fe50a96c86e329d1be
https://github.com/tiborauer
NEW FEATURE: normalize RSAmapshttps://github.com/automaticanalysis/automaticanalysis/pull/151/commits/d4d4e5547646650f99a19a8064fc2adde67a7c71
d4d4e55https://github.com/automaticanalysis/automaticanalysis/pull/151/commits/d4d4e5547646650f99a19a8064fc2adde67a7c71
NEW FEATURE: nonDCS - init shell commandhttps://github.com/automaticanalysis/automaticanalysis/pull/151/commits/ec5f22cdd7a8f366e3ca192e1ff20df3d11af01f
ec5f22chttps://github.com/automaticanalysis/automaticanalysis/pull/151/commits/ec5f22cdd7a8f366e3ca192e1ff20df3d11af01f
https://github.com/tiborauer
DEBUG: report no ignores implicit contrasts (e.g. eachagainstbaseline)https://github.com/automaticanalysis/automaticanalysis/pull/151/commits/3a0374ae0fd7d272167776162c68bfc1d726b192
3a0374ahttps://github.com/automaticanalysis/automaticanalysis/pull/151/commits/3a0374ae0fd7d272167776162c68bfc1d726b192
https://github.com/tiborauer
DEBUG: dartel_denorm (+decoregÖhttps://github.com/automaticanalysis/automaticanalysis/pull/151/commits/529834f6eb9ca41fc88f01ebdf7d1b9995dd0976
529834fhttps://github.com/automaticanalysis/automaticanalysis/pull/151/commits/529834f6eb9ca41fc88f01ebdf7d1b9995dd0976
https://github.com/tiborauer
DEBUG: add new stream to a modulehttps://github.com/automaticanalysis/automaticanalysis/pull/151/commits/78b5bde6878cab51591cec7f1929b12b40e0458c
78b5bdehttps://github.com/automaticanalysis/automaticanalysis/pull/151/commits/78b5bde6878cab51591cec7f1929b12b40e0458c
https://github.com/tiborauer
UPDATE: nonDCS - init shell commandhttps://github.com/automaticanalysis/automaticanalysis/pull/151/commits/d66cacd04ce9607e59859f3af25ad238341eddae
d66cacdhttps://github.com/automaticanalysis/automaticanalysis/pull/151/commits/d66cacd04ce9607e59859f3af25ad238341eddae
https://github.com/tiborauer
UPDATE: qsub (non DCS): specify resource as soft limit rather than hardhttps://github.com/automaticanalysis/automaticanalysis/pull/151/commits/cd992c76c2c1e9eb79b2c719bfb7931b528fb3ba
cd992c7https://github.com/automaticanalysis/automaticanalysis/pull/151/commits/cd992c76c2c1e9eb79b2c719bfb7931b528fb3ba
https://github.com/tiborauer
Merge pull requesthttps://github.com/automaticanalysis/automaticanalysis/pull/151/commits/39e2c4f2de0370cdeb38f6a858cbbafc7f2b8062
#56https://github.com/tiborauer/automaticanalysis/pull/56
from tiborauer/develhttps://github.com/automaticanalysis/automaticanalysis/pull/151/commits/39e2c4f2de0370cdeb38f6a858cbbafc7f2b8062
39e2c4fhttps://github.com/automaticanalysis/automaticanalysis/pull/151/commits/39e2c4f2de0370cdeb38f6a858cbbafc7f2b8062
UPDATE: MPM with 'usual' fieldmap streamhttps://github.com/automaticanalysis/automaticanalysis/pull/151/commits/a0921d7952e883c5020bb9bd5a9d146fc8f740cd
a0921d7https://github.com/automaticanalysis/automaticanalysis/pull/151/commits/a0921d7952e883c5020bb9bd5a9d146fc8f740cd
DEBUG: roi_extract - zero_voxhttps://github.com/automaticanalysis/automaticanalysis/pull/151/commits/4b84e28f1bda36b4599410a2c51199fdda38b799
4b84e28https://github.com/automaticanalysis/automaticanalysis/pull/151/commits/4b84e28f1bda36b4599410a2c51199fdda38b799
DEBUG: roi_valid for timeserieshttps://github.com/automaticanalysis/automaticanalysis/pull/151/commits/d3efe479d4c76466a2cafba07b4e627c2fd7c5fb
d3efe47https://github.com/automaticanalysis/automaticanalysis/pull/151/commits/d3efe479d4c76466a2cafba07b4e627c2fd7c5fb
https://github.com/tiborauer
NEW FEATURE: RSA - CoSMoMVPAhttps://github.com/automaticanalysis/automaticanalysis/pull/151/commits/abb10d436081e5d0fcce2e80acb36f74045bcdd1
abb10d4https://github.com/automaticanalysis/automaticanalysis/pull/151/commits/abb10d436081e5d0fcce2e80acb36f74045bcdd1
https://github.com/tiborauer
NEW FEATURE: append optional streamhttps://github.com/automaticanalysis/automaticanalysis/pull/151/commits/81fda962d8d5c1795eb2e9d57e6ab79157782168
81fda96https://github.com/automaticanalysis/automaticanalysis/pull/151/commits/81fda962d8d5c1795eb2e9d57e6ab79157782168
https://github.com/tiborauer
DEBUG: RSA - CoSMoMVPAhttps://github.com/automaticanalysis/automaticanalysis/pull/151/commits/6d01d7b4f1dcf5b87aa331c2a439e0d1c69e6579
6d01d7bhttps://github.com/automaticanalysis/automaticanalysis/pull/151/commits/6d01d7b4f1dcf5b87aa331c2a439e0d1c69e6579
https://github.com/tiborauer
DEBUG: RSA - CoSMoMVPAhttps://github.com/automaticanalysis/automaticanalysis/pull/151/commits/5a3673b794d51186d5ce61bec3485dba36314a8f
5a3673bhttps://github.com/automaticanalysis/automaticanalysis/pull/151/commits/5a3673b794d51186d5ce61bec3485dba36314a8f
https://github.com/tiborauer
DEBUG: RSA - CoSMoMVPA (aa_doprocessing_onetask has been also changed…https://github.com/automaticanalysis/automaticanalysis/pull/151/commits/f46681951cdcc51d94d6b72d08b0bc4c58c33bbb
f466819https://github.com/automaticanalysis/automaticanalysis/pull/151/commits/f46681951cdcc51d94d6b72d08b0bc4c58c33bbb
https://github.com/tiborauer
UPDATE: smooth segmentationshttps://github.com/automaticanalysis/automaticanalysis/pull/151/commits/7458f56c728964a4a6c27c2550d5a2d0f115d8d1
7458f56https://github.com/automaticanalysis/automaticanalysis/pull/151/commits/7458f56c728964a4a6c27c2550d5a2d0f115d8d1
UPDATE: redundant messageshttps://github.com/automaticanalysis/automaticanalysis/pull/151/commits/55e94412a0e1ac5ec89d284230b9df3318bff2b6
55e9441https://github.com/automaticanalysis/automaticanalysis/pull/151/commits/55e94412a0e1ac5ec89d284230b9df3318bff2b6
https://github.com/tiborauer
Merge pull requesthttps://github.com/automaticanalysis/automaticanalysis/pull/151/commits/2434f09165974c0c8bd0f317484c1d29bb381bdb
#57https://github.com/tiborauer/automaticanalysis/pull/57
from tiborauer/develhttps://github.com/automaticanalysis/automaticanalysis/pull/151/commits/2434f09165974c0c8bd0f317484c1d29bb381bdb
2434f09https://github.com/automaticanalysis/automaticanalysis/pull/151/commits/2434f09165974c0c8bd0f317484c1d29bb381bdb
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