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Title: GitHub - ZJUFanLab/scDeepSort: Cell-type Annotation for Single-cell Transcriptomics using Deep Learning with a Weighted Graph Neural Network · GitHub

Open Graph Title: GitHub - ZJUFanLab/scDeepSort: Cell-type Annotation for Single-cell Transcriptomics using Deep Learning with a Weighted Graph Neural Network

X Title: GitHub - ZJUFanLab/scDeepSort: Cell-type Annotation for Single-cell Transcriptomics using Deep Learning with a Weighted Graph Neural Network

Description: Cell-type Annotation for Single-cell Transcriptomics using Deep Learning with a Weighted Graph Neural Network - ZJUFanLab/scDeepSort

Open Graph Description: Cell-type Annotation for Single-cell Transcriptomics using Deep Learning with a Weighted Graph Neural Network - ZJUFanLab/scDeepSort

X Description: Cell-type Annotation for Single-cell Transcriptomics using Deep Learning with a Weighted Graph Neural Network - ZJUFanLab/scDeepSort

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xin_shao@zju.edu.cn
capriceyhh@zju.edu.cn
zhuangxiang@zju.edu.cn

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