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Title: GitHub - ZJUFanLab/scCATCH: Automatic Annotation on Cell Types of Clusters from Single-Cell RNA Sequencing Data · GitHub

Open Graph Title: GitHub - ZJUFanLab/scCATCH: Automatic Annotation on Cell Types of Clusters from Single-Cell RNA Sequencing Data

X Title: GitHub - ZJUFanLab/scCATCH: Automatic Annotation on Cell Types of Clusters from Single-Cell RNA Sequencing Data

Description: Automatic Annotation on Cell Types of Clusters from Single-Cell RNA Sequencing Data - ZJUFanLab/scCATCH

Open Graph Description: Automatic Annotation on Cell Types of Clusters from Single-Cell RNA Sequencing Data - ZJUFanLab/scCATCH

X Description: Automatic Annotation on Cell Types of Clusters from Single-Cell RNA Sequencing Data - ZJUFanLab/scCATCH

Opengraph URL: https://github.com/ZJUFanLab/scCATCH

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use custom cellmatchhttps://github.com/ZJUFanLab/scCATCH/wiki/Use-custom-cellmatch
select different combination of tissues or cancers for annotationhttps://github.com/ZJUFanLab/scCATCH/wiki/Select-different-combination-of-tissues-or-cancers-for-annotation
add more marker genes to cellmatch for annotationhttps://github.com/ZJUFanLab/scCATCH/wiki/Add-more-marker-genes-to-cellmatch-for-annotation
use markers from different species other than human and mousehttps://github.com/ZJUFanLab/scCATCH/wiki/Use-markers-from-different-species
use more methods to identify highly expressed geneshttps://github.com/ZJUFanLab/scCATCH/wiki/Use-more-methods-to-identify-highly-expressed-genes
https://github.com/ZJUFanLab/scCATCH#cite
doi: 10.1016/j.isci.2020.100882https://www.sciencedirect.com/science/article/pii/S2589004220300663
PMID:32062421https://pubmed.ncbi.nlm.nih.gov/32062421/
www.sciencedirect.com/science/article/pii/S2589004220300663https://www.sciencedirect.com/science/article/pii/S2589004220300663
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