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Title: GitHub - YcheCourseProject/compomics-utilities: Open-source java library for computational proteomics · GitHub

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Description: Open-source java library for computational proteomics - YcheCourseProject/compomics-utilities

Open Graph Description: Open-source java library for computational proteomics - YcheCourseProject/compomics-utilities

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https://github.com/YcheCourseProject/compomics-utilities#compomics-utilities
What is compomics-utilities?https://github.com/YcheCourseProject/compomics-utilities#what-is-compomics-utilities?
Projects Using compomics-utilitieshttps://github.com/YcheCourseProject/compomics-utilities#projects-using-compomics-utilities
Using compomics-utilitieshttps://github.com/YcheCourseProject/compomics-utilities#using-compomics-utilities
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Maven Dependencyhttps://github.com/YcheCourseProject/compomics-utilities#maven-dependency
Screenshotshttps://github.com/YcheCourseProject/compomics-utilities#screenshots
Bioinformatics for Proteomics Tutorialhttp://compomics.com/bioinformatics-for-proteomics/
https://github.com/YcheCourseProject/compomics-utilities#compomics-utilities-publication
Barsnes et al: BMC Bioinformatics. 2011 Mar 8;12(1):70http://www.ncbi.nlm.nih.gov/pubmed/21385435
https://github.com/YcheCourseProject/compomics-utilities#what-is-compomics-utilities
Computational Omics and Systems Biology Grouphttp://www.compomics.com
Go to top of pagehttps://github.com/YcheCourseProject/compomics-utilities#compomics-utilities
https://github.com/YcheCourseProject/compomics-utilities#projects-using-compomics-utilities
PeptideShakerhttp://compomics.github.io/projects/peptide-shaker.html
Vaudel et al: Nature Biotechnol. 2015 Jan;33(1):22–24.http://www.nature.com/nbt/journal/v33/n1/full/nbt.3109.html
MetaProteomeAnalyzerhttp://code.google.com/p/meta-proteome-analyzer
Muth et al: J Proteome Res. 2015 (in press).http://www.ncbi.nlm.nih.gov/pubmed/25660940
DeNovoGUIhttp://compomics.github.io/projects/denovogui.html
Muth at al: J Proteome Res. 2014 Feb 7;13(2):1143-6.http://www.ncbi.nlm.nih.gov/pubmed/24295440
pride-asaphttp://compomics.github.io/projects/pride-asa-pipeline.html
Hulstaert et al: J Proteomics. 2013 Apr 17http://www.ncbi.nlm.nih.gov/pubmed/23603108
ProteoCloudhttp://proteocloud.googlecode.com
Muth et al: J Proteomics. 2013 Aug 2;88:104-8http://www.ncbi.nlm.nih.gov/pubmed/23305951
thermo-msf-parserhttp://compomics.github.io/projects/thermo-msf-parser.html
Colaert et al: J Proteome Res. 2011;10(8):3840-3http://www.ncbi.nlm.nih.gov/pubmed/21714566
SearchGUIhttp://compomics.github.io/projects/searchgui.html
Vaudel et al: Proteomics 2011;11(5):996-9http://www.ncbi.nlm.nih.gov/pubmed/21337703
XTandem Parserhttp://compomics.github.io/projects/xtandem-parser.html
Muth et al: Proteomics 2010;10(7):1522-4http://www.ncbi.nlm.nih.gov/pubmed/20140905
jmzMLhttp://jmzML.googlecode.com
Côté et al: Proteomics 2010;10(7):1332-5http://www.ncbi.nlm.nih.gov/pubmed/20127693
Fragmentation Analyzerhttp://compomics.github.io/projects/fragmentation-analyzer.html
Barsnes et al: Proteomics 2010;10(5):1087-90http://www.ncbi.nlm.nih.gov/pubmed/20049869
ms_limshttp://compomics.github.io/projects/ms-lims.html
Helsens et al: Proteomics 2010;10(6):1261-4http://www.ncbi.nlm.nih.gov/pubmed/20058248
Roverhttps://github.com/compomics/compomics-rover
Colaert et al: Proteomics 2010;10(6):1226-9http://www.ncbi.nlm.nih.gov/pubmed/20058247
IceLogohttp://compomics.github.io/projects/icelogo.html
Colaert et al: Nature Methods 2009;6(11):786-7http://www.ncbi.nlm.nih.gov/pubmed/19876014
OMSSA Parserhttp://compomics.github.io/projects/omssa-parser.html
Barsnes et al: Proteomics 2009;9(14):3772-4http://www3.interscience.wiley.com/journal/122524294/abstract
Peptizerhttps://github.com/compomics/peptizer
Helsens et al: MCP 2008;7(12):2363-72http://www.ncbi.nlm.nih.gov/pubmed/18667410
MascotDatfilehttp://compomics.github.io/projects/mascotdatfile.html
Helsens et al: Proteomics 2007;7(3):364-6http://www.ncbi.nlm.nih.gov/pubmed/17203510
DBToolkithttps://github.com/compomics/dbtoolkit
Martens et al: Bioinformatics 2005;21(17):3584-5http://www.ncbi.nlm.nih.gov/pubmed/16030071
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