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| CDCscreen | https://github.com/YangLab/CDCscreen |
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| test_data | https://github.com/YangLab/CDCscreen/tree/master/test_data |
| CDCscreen_scale.R | https://github.com/YangLab/CDCscreen/blob/master/CDCscreen_scale.R |
| CDCscreen_scale.R | https://github.com/YangLab/CDCscreen/blob/master/CDCscreen_scale.R |
| README.md | https://github.com/YangLab/CDCscreen/blob/master/README.md |
| README.md | https://github.com/YangLab/CDCscreen/blob/master/README.md |
| combine_diff.pl | https://github.com/YangLab/CDCscreen/blob/master/combine_diff.pl |
| combine_diff.pl | https://github.com/YangLab/CDCscreen/blob/master/combine_diff.pl |
| join_ID.pl | https://github.com/YangLab/CDCscreen/blob/master/join_ID.pl |
| join_ID.pl | https://github.com/YangLab/CDCscreen/blob/master/join_ID.pl |
| run_CDCscreen_2_reps.sh | https://github.com/YangLab/CDCscreen/blob/master/run_CDCscreen_2_reps.sh |
| run_CDCscreen_2_reps.sh | https://github.com/YangLab/CDCscreen/blob/master/run_CDCscreen_2_reps.sh |
| run_CDCscreen_3_reps.sh | https://github.com/YangLab/CDCscreen/blob/master/run_CDCscreen_3_reps.sh |
| run_CDCscreen_3_reps.sh | https://github.com/YangLab/CDCscreen/blob/master/run_CDCscreen_3_reps.sh |
| README | https://github.com/YangLab/CDCscreen |
| https://github.com/YangLab/CDCscreen#cdcscreen |
| https://github.com/YangLab/CDCscreen#schema |
| https://github.com/YangLab/CDCscreen/blob/master/doc/CDCscreen_pipeline.jpg |
| https://github.com/YangLab/CDCscreen#installation-requirements-mandatory |
| https://github.com/YangLab/CDCscreen#data-requirements-mandatory |
| CLEAR | https://github.com/YangLab/CLEAR |
| https://github.com/YangLab/CDCscreen#installation |
| https://github.com/YangLab/CDCscreen#usage |
| https://github.com/YangLab/CDCscreen#run_cdcscreen_2_repssh-is-used-for-2-biology-replicates |
| https://github.com/YangLab/CDCscreen#run_cdcscreen_3_repssh-is-used-for-3-biology-replicates |
| https://github.com/YangLab/CDCscreen#output |
| https://github.com/YangLab/CDCscreen#example-run_cdcscreen_2_repssh-is-used-for-2-biology-replicates |
| https://github.com/YangLab/CDCscreen#1-input-data-mandatory |
| test_data | https://github.com/YangLab/CDCscreen/blob/master/test_data/ |
| test_data/ref_gRNA_seq.fa | https://github.com/YangLab/CDCscreen/blob/master/test_data/ref_gRNA_seq.fa |
| test_data | https://github.com/YangLab/CDCscreen/blob/master/test_data/ |
| test_data/FPBcirc_293FT.txt | https://github.com/YangLab/CDCscreen/blob/master/test_data/FPBcirc_293FT.txt |
| https://github.com/YangLab/CDCscreen#2-usage |
| https://github.com/YangLab/CDCscreen#3-output |
| test_data/CDCscreen_circRNA_293FT.txt | https://github.com/YangLab/CDCscreen/blob/master/test_data/CDCscreen_circRNA_293FT.txt |
| https://github.com/YangLab/CDCscreen#citation |
| Siqi Li#, Xiang Li#, Wei Xue#, Lin Zhang#, Liang-Zhong Yang, Shi-Meng Cao, Yun-Ni Lei, Chu-Xiao Liu, Si-Kun Guo, Lin Shan, Man Wu, Xiao Tao, Jia-Lin Zhang, Xiang Gao, Jun Zhang, Jia Wei, Jinsong Li*, Li Yang*, Ling-Ling Chen*. Screening for functional circular RNAs using the CRISPR-Cas13 system. Nat Methods, 2020 | https://www.nature.com/articles/s41592-020-01011-4 |
| https://github.com/YangLab/CDCscreen#license |
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