René's URL Explorer Experiment


Title: GitHub - Topp-Roots-Lab/rsa-gui: User-controlled pipeline for analyzing plant root system architecture · GitHub

Open Graph Title: GitHub - Topp-Roots-Lab/rsa-gui: User-controlled pipeline for analyzing plant root system architecture

X Title: GitHub - Topp-Roots-Lab/rsa-gui: User-controlled pipeline for analyzing plant root system architecture

Description: User-controlled pipeline for analyzing plant root system architecture - Topp-Roots-Lab/rsa-gui

Open Graph Description: User-controlled pipeline for analyzing plant root system architecture - Topp-Roots-Lab/rsa-gui

X Description: User-controlled pipeline for analyzing plant root system architecture - Topp-Roots-Lab/rsa-gui

Mail addresses
koestreich@danforthcenter.org

Opengraph URL: https://github.com/Topp-Roots-Lab/rsa-gui

X: @github

direct link

Domain: github.com

route-pattern/:user_id/:repository
route-controllerfiles
route-actiondisambiguate
fetch-noncev2:1c1751bf-02c3-5951-e2c6-bcd68ef8885b
current-catalog-service-hashf3abb0cc802f3d7b95fc8762b94bdcb13bf39634c40c357301c4aa1d67a256fb
request-idD554:134D84:2E7466B:420D909:6A591547
html-safe-nonce39d9771ad5beb1a1bd8e07e61a24b9bfd45863dbca398185d57b2d29f7a7729c
visitor-payloadeyJyZWZlcnJlciI6IiIsInJlcXVlc3RfaWQiOiJENTU0OjEzNEQ4NDoyRTc0NjZCOjQyMEQ5MDk6NkE1OTE1NDciLCJ2aXNpdG9yX2lkIjoiMzY3MDAzMjA0ODgwNzY2Mjc5IiwicmVnaW9uX2VkZ2UiOiJpYWQiLCJyZWdpb25fcmVuZGVyIjoiaWFkIn0=
visitor-hmacf4799630308fbf2ef263103eea6d59cac96df1ee9a7add617422a07ad41da1ec
hovercard-subject-tagrepository:84787309
github-keyboard-shortcutsrepository,copilot
google-site-verificationApib7-x98H0j5cPqHWwSMm6dNU4GmODRoqxLiDzdx9I
octolytics-urlhttps://collector.github.com/github/collect
analytics-location//
fb:app_id1401488693436528
apple-itunes-appapp-id=1477376905, app-argument=https://github.com/Topp-Roots-Lab/rsa-gui
twitter:imagehttps://opengraph.githubassets.com/56aaca919f6d49a1ccb1460519d1c4cdfc94e4cf6c6c2aaba2b398e8d072316b/Topp-Roots-Lab/rsa-gui
twitter:cardsummary_large_image
og:imagehttps://opengraph.githubassets.com/56aaca919f6d49a1ccb1460519d1c4cdfc94e4cf6c6c2aaba2b398e8d072316b/Topp-Roots-Lab/rsa-gui
og:image:altUser-controlled pipeline for analyzing plant root system architecture - Topp-Roots-Lab/rsa-gui
og:image:width1200
og:image:height600
og:site_nameGitHub
og:typeobject
hostnamegithub.com
expected-hostnamegithub.com
None4eb8ea312922ccce63e833964f9606d971cffb2d5b6c10a62c4a7dcc48d826e2
turbo-cache-controlno-cache
go-importgithub.com/Topp-Roots-Lab/rsa-gui git https://github.com/Topp-Roots-Lab/rsa-gui.git
octolytics-dimension-user_id26209660
octolytics-dimension-user_loginTopp-Roots-Lab
octolytics-dimension-repository_id84787309
octolytics-dimension-repository_nwoTopp-Roots-Lab/rsa-gui
octolytics-dimension-repository_publictrue
octolytics-dimension-repository_is_forkfalse
octolytics-dimension-repository_network_root_id84787309
octolytics-dimension-repository_network_root_nwoTopp-Roots-Lab/rsa-gui
turbo-body-classeslogged-out env-production page-responsive
disable-turbofalse
browser-stats-urlhttps://api.github.com/_private/browser/stats
browser-errors-urlhttps://api.github.com/_private/browser/errors
release886a6c6fbce3d3caad5b3b995ef09ff6ca23f10e
ui-targetfull
theme-color#1e2327
color-schemelight dark

Links:

Skip to contenthttps://github.com/Topp-Roots-Lab/rsa-gui#start-of-content
https://github.com/
Sign in https://github.com/login?return_to=https%3A%2F%2Fgithub.com%2FTopp-Roots-Lab%2Frsa-gui
GitHub CopilotWrite better code with AIhttps://github.com/features/copilot
GitHub Copilot appDirect agents from issue to mergehttps://github.com/features/ai/github-app
MCP RegistryNewIntegrate external toolshttps://github.com/mcp
ActionsAutomate any workflowhttps://github.com/features/actions
CodespacesInstant dev environmentshttps://github.com/features/codespaces
IssuesPlan and track workhttps://github.com/features/issues
Code ReviewManage code changeshttps://github.com/features/code-review
GitHub Advanced SecurityFind and fix vulnerabilitieshttps://github.com/security/advanced-security
Code securitySecure your code as you buildhttps://github.com/security/advanced-security/code-security
Secret protectionStop leaks before they starthttps://github.com/security/advanced-security/secret-protection
Why GitHubhttps://github.com/why-github
Documentationhttps://docs.github.com
Bloghttps://github.blog
Changeloghttps://github.blog/changelog
Marketplacehttps://github.com/marketplace
View all featureshttps://github.com/features
Enterpriseshttps://github.com/enterprise
Small and medium teamshttps://github.com/team
Startupshttps://github.com/enterprise/startups
Nonprofitshttps://github.com/solutions/industry/nonprofits
App Modernizationhttps://github.com/solutions/use-case/app-modernization
DevSecOpshttps://github.com/solutions/use-case/devsecops
DevOpshttps://github.com/solutions/use-case/devops
CI/CDhttps://github.com/solutions/use-case/ci-cd
View all use caseshttps://github.com/solutions/use-case
Healthcarehttps://github.com/solutions/industry/healthcare
Financial serviceshttps://github.com/solutions/industry/financial-services
Manufacturinghttps://github.com/solutions/industry/manufacturing
Governmenthttps://github.com/solutions/industry/government
View all industrieshttps://github.com/solutions/industry
View all solutionshttps://github.com/solutions
AIhttps://github.com/resources/articles?topic=ai
Software Developmenthttps://github.com/resources/articles?topic=software-development
DevOpshttps://github.com/resources/articles?topic=devops
Securityhttps://github.com/resources/articles?topic=security
View all topicshttps://github.com/resources/articles
Customer storieshttps://github.com/customer-stories
Events & webinarshttps://github.com/resources/events
Ebooks & reportshttps://github.com/resources/whitepapers
Business insightshttps://github.com/solutions/executive-insights
GitHub Skillshttps://skills.github.com
Documentationhttps://docs.github.com
Customer supporthttps://support.github.com
Community forumhttps://github.com/orgs/community/discussions
Trust centerhttps://github.com/trust-center
Partnershttps://github.com/partners
View all resourceshttps://github.com/resources
GitHub SponsorsFund open source developershttps://github.com/open-source/sponsors
Security Labhttps://securitylab.github.com
Maintainer Communityhttps://maintainers.github.com
Acceleratorhttps://github.com/open-source/accelerator
GitHub Starshttps://stars.github.com
Archive Programhttps://archiveprogram.github.com
Topicshttps://github.com/topics
Trendinghttps://github.com/trending
Collectionshttps://github.com/collections
Enterprise platformAI-powered developer platformhttps://github.com/enterprise
GitHub Advanced SecurityEnterprise-grade security featureshttps://github.com/security/advanced-security
Copilot for BusinessEnterprise-grade AI featureshttps://github.com/features/copilot/copilot-business
Premium SupportEnterprise-grade 24/7 supporthttps://github.com/enterprise/premium-support
Pricinghttps://github.com/pricing
Search syntax tipshttps://docs.github.com/search-github/github-code-search/understanding-github-code-search-syntax
documentationhttps://docs.github.com/search-github/github-code-search/understanding-github-code-search-syntax
Sign in https://github.com/login?return_to=https%3A%2F%2Fgithub.com%2FTopp-Roots-Lab%2Frsa-gui
Sign up https://github.com/signup?ref_cta=Sign+up&ref_loc=header+logged+out&ref_page=%2F%3Cuser-name%3E%2F%3Crepo-name%3E&source=header-repo&source_repo=Topp-Roots-Lab%2Frsa-gui
Reloadhttps://github.com/Topp-Roots-Lab/rsa-gui
Reloadhttps://github.com/Topp-Roots-Lab/rsa-gui
Reloadhttps://github.com/Topp-Roots-Lab/rsa-gui
Please reload this pagehttps://github.com/Topp-Roots-Lab/rsa-gui
Topp-Roots-Lab https://github.com/Topp-Roots-Lab
rsa-guihttps://github.com/Topp-Roots-Lab/rsa-gui
Notifications https://github.com/login?return_to=%2FTopp-Roots-Lab%2Frsa-gui
Fork 4 https://github.com/login?return_to=%2FTopp-Roots-Lab%2Frsa-gui
Star 3 https://github.com/login?return_to=%2FTopp-Roots-Lab%2Frsa-gui
Code https://github.com/Topp-Roots-Lab/rsa-gui
Issues 5 https://github.com/Topp-Roots-Lab/rsa-gui/issues
Pull requests 1 https://github.com/Topp-Roots-Lab/rsa-gui/pulls
Actions https://github.com/Topp-Roots-Lab/rsa-gui/actions
Projects https://github.com/Topp-Roots-Lab/rsa-gui/projects
Wiki https://github.com/Topp-Roots-Lab/rsa-gui/wiki
Security and quality 0 https://github.com/Topp-Roots-Lab/rsa-gui/security
Insights https://github.com/Topp-Roots-Lab/rsa-gui/pulse
Code https://github.com/Topp-Roots-Lab/rsa-gui
Issues https://github.com/Topp-Roots-Lab/rsa-gui/issues
Pull requests https://github.com/Topp-Roots-Lab/rsa-gui/pulls
Actions https://github.com/Topp-Roots-Lab/rsa-gui/actions
Projects https://github.com/Topp-Roots-Lab/rsa-gui/projects
Wiki https://github.com/Topp-Roots-Lab/rsa-gui/wiki
Security and quality https://github.com/Topp-Roots-Lab/rsa-gui/security
Insights https://github.com/Topp-Roots-Lab/rsa-gui/pulse
https://github.com/Topp-Roots-Lab/rsa-gui
Brancheshttps://github.com/Topp-Roots-Lab/rsa-gui/branches
Tagshttps://github.com/Topp-Roots-Lab/rsa-gui/tags
https://github.com/Topp-Roots-Lab/rsa-gui/branches
https://github.com/Topp-Roots-Lab/rsa-gui/tags
126 Commitshttps://github.com/Topp-Roots-Lab/rsa-gui/commits/main/
https://github.com/Topp-Roots-Lab/rsa-gui/commits/main/
.github/ISSUE_TEMPLATEhttps://github.com/Topp-Roots-Lab/rsa-gui/tree/main/.github/ISSUE_TEMPLATE
.github/ISSUE_TEMPLATEhttps://github.com/Topp-Roots-Lab/rsa-gui/tree/main/.github/ISSUE_TEMPLATE
.ideahttps://github.com/Topp-Roots-Lab/rsa-gui/tree/main/.idea
.ideahttps://github.com/Topp-Roots-Lab/rsa-gui/tree/main/.idea
dochttps://github.com/Topp-Roots-Lab/rsa-gui/tree/main/doc
dochttps://github.com/Topp-Roots-Lab/rsa-gui/tree/main/doc
src/mainhttps://github.com/Topp-Roots-Lab/rsa-gui/tree/main/src/main
src/mainhttps://github.com/Topp-Roots-Lab/rsa-gui/tree/main/src/main
.gitignorehttps://github.com/Topp-Roots-Lab/rsa-gui/blob/main/.gitignore
.gitignorehttps://github.com/Topp-Roots-Lab/rsa-gui/blob/main/.gitignore
CHANGELOG.mdhttps://github.com/Topp-Roots-Lab/rsa-gui/blob/main/CHANGELOG.md
CHANGELOG.mdhttps://github.com/Topp-Roots-Lab/rsa-gui/blob/main/CHANGELOG.md
INSTALL.mdhttps://github.com/Topp-Roots-Lab/rsa-gui/blob/main/INSTALL.md
INSTALL.mdhttps://github.com/Topp-Roots-Lab/rsa-gui/blob/main/INSTALL.md
README.mdhttps://github.com/Topp-Roots-Lab/rsa-gui/blob/main/README.md
README.mdhttps://github.com/Topp-Roots-Lab/rsa-gui/blob/main/README.md
install.shhttps://github.com/Topp-Roots-Lab/rsa-gui/blob/main/install.sh
install.shhttps://github.com/Topp-Roots-Lab/rsa-gui/blob/main/install.sh
jooq-config-rsa_gia.xmlhttps://github.com/Topp-Roots-Lab/rsa-gui/blob/main/jooq-config-rsa_gia.xml
jooq-config-rsa_gia.xmlhttps://github.com/Topp-Roots-Lab/rsa-gui/blob/main/jooq-config-rsa_gia.xml
pom.xmlhttps://github.com/Topp-Roots-Lab/rsa-gui/blob/main/pom.xml
pom.xmlhttps://github.com/Topp-Roots-Lab/rsa-gui/blob/main/pom.xml
READMEhttps://github.com/Topp-Roots-Lab/rsa-gui
https://github.com/Topp-Roots-Lab/rsa-gui#root-system-architecture-general-image-analysis-gui
https://github.com/Topp-Roots-Lab/rsa-gui#table-of-contents
System Structurehttps://github.com/Topp-Roots-Lab/rsa-gui#system-structure
Installationhttps://github.com/Topp-Roots-Lab/rsa-gui#installation
Administrationhttps://github.com/Topp-Roots-Lab/rsa-gui#administration
Add new userhttps://github.com/Topp-Roots-Lab/rsa-gui#add-new-user
Add new specieshttps://github.com/Topp-Roots-Lab/rsa-gui#add-new-species
Upload datahttps://github.com/Topp-Roots-Lab/rsa-gui#upload-data
Archive datahttps://github.com/Topp-Roots-Lab/rsa-gui#archive-data
Developmenthttps://github.com/Topp-Roots-Lab/rsa-gui#development
Dependencieshttps://github.com/Topp-Roots-Lab/rsa-gui#dependencies
RHEL-based, CentOS Dependency Installation Guidehttps://github.com/Topp-Roots-Lab/rsa-gui#rhel-based-centos-dependency-installation-guide
Debian-based, Ubuntu Dependency Installation Guidehttps://github.com/Topp-Roots-Lab/rsa-gui#debian-based-ubuntu-dependency-installation-guide
Buildhttps://github.com/Topp-Roots-Lab/rsa-gui#build
Configure MySQL Serverhttps://github.com/Topp-Roots-Lab/rsa-gui#mysql-configuration
Troubleshootinghttps://github.com/Topp-Roots-Lab/rsa-gui#troubleshooting
Missing Python Packageshttps://github.com/Topp-Roots-Lab/rsa-gui#missing-python-packages
Could not connect to databasehttps://github.com/Topp-Roots-Lab/rsa-gui#could-not-connect-to-database
PrincipalUser Errorhttps://github.com/Topp-Roots-Lab/rsa-gui#principaluser-error
java.nio.file.attribute.UserPrincipalNotFoundExceptionhttps://github.com/Topp-Roots-Lab/rsa-gui#java.nio.file.attribute.UserPrincipalNotFoundException
rsa-mv2orig-launcherhttps://github.com/Topp-Roots-Lab/rsa-gui#rsa-mv2orig-launcher
Invalid Specieshttps://github.com/Topp-Roots-Lab/rsa-gui#invalid-species
File not found in processed_imageshttps://github.com/Topp-Roots-Lab/rsa-gui#file-not-found-in-processed_images
Create Image Thumbnail Modal Frozenhttps://github.com/Topp-Roots-Lab/rsa-gui#create-image-thumbnail-modal-frozen
OutputInfoDBFunctions.findMaxRunID() Errorhttps://github.com/Topp-Roots-Lab/rsa-gui#outputinfodbfunctions.findmaxrunid-error
Gia2D - No configuration are availablehttps://github.com/Topp-Roots-Lab/rsa-gui#gia2d---no-configuration-are-available
QC2 error, cannot find “*thresholded_composite.png”https://github.com/Topp-Roots-Lab/rsa-gui#qc2-error,-cannot-find-*thresholded_composite.png%E2%80%9D
Gia2D - ERROR 139https://github.com/Topp-Roots-Lab/rsa-gui#gia2d---error-139
https://github.com/Topp-Roots-Lab/rsa-gui#installation
INSTALLhttps://github.com/Topp-Roots-Lab/rsa-gui/blob/main/INSTALL.md
doc/virtual-machine-setup.mdhttps://github.com/Topp-Roots-Lab/rsa-gui/blob/main/doc/virtual-machine-setup.md
https://github.com/Topp-Roots-Lab/rsa-gui#administration
https://github.com/Topp-Roots-Lab/rsa-gui#add-new-user
https://github.com/Topp-Roots-Lab/rsa-gui#add-new-species
https://github.com/Topp-Roots-Lab/rsa-gui/blob/main/doc/img/empty-add-organism.png
https://github.com/Topp-Roots-Lab/rsa-gui/blob/main/doc/img/example-species.png
https://github.com/Topp-Roots-Lab/rsa-gui#upload-data
https://github.com/Topp-Roots-Lab/gel-imaging-file-manager.githttps://github.com/Topp-Roots-Lab/gel-imaging-file-manager.git
https://github.com/Topp-Roots-Lab/rsa-gui#archive-data
https://github.com/Topp-Roots-Lab/rsa-gui#development
https://github.com/Topp-Roots-Lab/rsa-gui#dependencies
https://github.com/Topp-Roots-Lab/rsa-gui#rhel-based-centos-dependency-installation-guide
Java SE Development Kit 8u45https://www.oracle.com/technetwork/java/javase/downloads/java-archive-javase8-2177648.html
Python 2.xhttps://www.python.org/downloads/
IntelliJhttps://www.jetbrains.com/idea/
MySQL Serverhttps://www.digitalocean.com/community/tutorials/how-to-install-mysql-on-centos-7
https://github.com/Topp-Roots-Lab/rsa-gui#debian-based-ubuntu-dependency-installation-guide
Java SE Development Kit 8u202https://www.oracle.com/technetwork/java/javase/downloads/java-archive-javase8-2177648.html
Python 2.xhttps://www.python.org/downloads/
IntelliJhttps://www.jetbrains.com/idea/
MySQL Serverhttps://www.digitalocean.com/community/tutorials/how-to-install-mysql-on-ubuntu-18-04
https://github.com/Topp-Roots-Lab/rsa-gui#build
https://github.com/Topp-Roots-Lab/rsa-gui#java-package-rsa-guijar
https://github.com/Topp-Roots-Lab/rsa-gui#mysql-configuration
https://github.com/Topp-Roots-Lab/rsa-gui#import-mysql-database-schema
https://github.com/Topp-Roots-Lab/rsa-gui#future-plans
https://github.com/Topp-Roots-Lab/rsa-gui#troubleshooting
https://github.com/Topp-Roots-Lab/rsa-gui#could-not-connect-to-database
https://github.com/Topp-Roots-Lab/rsa-gui#principaluser-error
https://github.com/Topp-Roots-Lab/rsa-gui#javaniofileattributeuserprincipalnotfoundexception
https://github.com/Topp-Roots-Lab/rsa-gui#rsa-mv2orig-launcher
https://github.com/Topp-Roots-Lab/rsa-gui#invalid-species
https://github.com/Topp-Roots-Lab/rsa-gui#file-not-found-in-processed_images
https://github.com/Topp-Roots-Lab/rsa-gui#create-image-thumbnail-modal-frozen
https://github.com/Topp-Roots-Lab/rsa-gui#outputinfodbfunctionsfindmaxrunid-error
https://github.com/Topp-Roots-Lab/rsa-gui#gia2d---no-configuration-are-available
https://github.com/Topp-Roots-Lab/rsa-gui#qc2-error-cannot-find-thresholded_compositepng
https://github.com/Topp-Roots-Lab/rsa-gui#gia2d---error-139
Readme https://github.com/Topp-Roots-Lab/rsa-gui#readme-ov-file
Please reload this pagehttps://github.com/Topp-Roots-Lab/rsa-gui
Activityhttps://github.com/Topp-Roots-Lab/rsa-gui/activity
Custom propertieshttps://github.com/Topp-Roots-Lab/rsa-gui/custom-properties
4 forkshttps://github.com/Topp-Roots-Lab/rsa-gui/forks
Report repository https://github.com/contact/report-content?content_url=https%3A%2F%2Fgithub.com%2FTopp-Roots-Lab%2Frsa-gui&report=Topp-Roots-Lab+%28user%29
Releaseshttps://github.com/Topp-Roots-Lab/rsa-gui/releases
1 tags https://github.com/Topp-Roots-Lab/rsa-gui/tags
Packages 0https://github.com/orgs/Topp-Roots-Lab/packages?repo_name=rsa-gui
Please reload this pagehttps://github.com/Topp-Roots-Lab/rsa-gui
Please reload this pagehttps://github.com/Topp-Roots-Lab/rsa-gui
Contributorshttps://github.com/Topp-Roots-Lab/rsa-gui/graphs/contributors
Please reload this pagehttps://github.com/Topp-Roots-Lab/rsa-gui
Java 99.5% https://github.com/Topp-Roots-Lab/rsa-gui/search?l=java
Shell 0.5% https://github.com/Topp-Roots-Lab/rsa-gui/search?l=shell
https://github.com
Termshttps://docs.github.com/site-policy/github-terms/github-terms-of-service
Privacyhttps://docs.github.com/site-policy/privacy-policies/github-privacy-statement
Securityhttps://github.com/security
Statushttps://www.githubstatus.com/
Communityhttps://github.community/
Docshttps://docs.github.com/
Contacthttps://support.github.com?tags=dotcom-footer

Viewport: width=device-width


URLs of crawlers that visited me.