René's URL Explorer Experiment


Title: GitHub - TCoulth/dynamicMPNN: LigandMPNN but with dynamic constraints. This allows the biases applied during inference to adjust to a desired goal during the generation process. Current implementations are for pI targeting and surface patch generation · GitHub

Open Graph Title: GitHub - TCoulth/dynamicMPNN: LigandMPNN but with dynamic constraints. This allows the biases applied during inference to adjust to a desired goal during the generation process. Current implementations are for pI targeting and surface patch generation

X Title: GitHub - TCoulth/dynamicMPNN: LigandMPNN but with dynamic constraints. This allows the biases applied during inference to adjust to a desired goal during the generation process. Current implementations are for pI targeting and surface patch generation

Description: LigandMPNN but with dynamic constraints. This allows the biases applied during inference to adjust to a desired goal during the generation process. Current implementations are for pI targeting and surface patch generation - TCoulth/dynamicMPNN

Open Graph Description: LigandMPNN but with dynamic constraints. This allows the biases applied during inference to adjust to a desired goal during the generation process. Current implementations are for pI targeting and ...

X Description: LigandMPNN but with dynamic constraints. This allows the biases applied during inference to adjust to a desired goal during the generation process. Current implementations are for pI targeting and ...

Opengraph URL: https://github.com/TCoulth/dynamicMPNN

X: @github

direct link

Domain: github.com

route-pattern/:user_id/:repository
route-controllerfiles
route-actiondisambiguate
fetch-noncev2:bc6635f2-d76b-048e-56cd-58c41de39b89
current-catalog-service-hashf3abb0cc802f3d7b95fc8762b94bdcb13bf39634c40c357301c4aa1d67a256fb
request-idDADE:25544A:5796A3E:78C0B2A:6A4B9FE6
html-safe-nonce20937e41d0153eae35fb675d8f8651af93205d3b00bc945528b8035b052c571b
visitor-payloadeyJyZWZlcnJlciI6IiIsInJlcXVlc3RfaWQiOiJEQURFOjI1NTQ0QTo1Nzk2QTNFOjc4QzBCMkE6NkE0QjlGRTYiLCJ2aXNpdG9yX2lkIjoiNzcwMjIxMzA2MDQxMzA3MTMzNCIsInJlZ2lvbl9lZGdlIjoiaWFkIiwicmVnaW9uX3JlbmRlciI6ImlhZCJ9
visitor-hmacdd5b4e22bb2b9c186aee4e7536b44b3996b6c7868d097364afa09739d324d5ff
hovercard-subject-tagrepository:1211853923
github-keyboard-shortcutsrepository,copilot
google-site-verificationApib7-x98H0j5cPqHWwSMm6dNU4GmODRoqxLiDzdx9I
octolytics-urlhttps://collector.github.com/github/collect
analytics-location//
fb:app_id1401488693436528
apple-itunes-appapp-id=1477376905, app-argument=https://github.com/TCoulth/dynamicMPNN
twitter:imagehttps://opengraph.githubassets.com/02b7b9318214bf303a837b5b1b06f006a5bca08272da4fbab00efc6bcdb28f6a/TCoulth/dynamicMPNN
twitter:cardsummary_large_image
og:imagehttps://opengraph.githubassets.com/02b7b9318214bf303a837b5b1b06f006a5bca08272da4fbab00efc6bcdb28f6a/TCoulth/dynamicMPNN
og:image:altLigandMPNN but with dynamic constraints. This allows the biases applied during inference to adjust to a desired goal during the generation process. Current implementations are for pI targeting and ...
og:image:width1200
og:image:height600
og:site_nameGitHub
og:typeobject
hostnamegithub.com
expected-hostnamegithub.com
Nonea7e470aeb8fedd833ae331b0a162f6c5a72c09b899dd94a7cd531e5e0e3a93d5
turbo-cache-controlno-cache
go-importgithub.com/TCoulth/dynamicMPNN git https://github.com/TCoulth/dynamicMPNN.git
octolytics-dimension-user_id21342963
octolytics-dimension-user_loginTCoulth
octolytics-dimension-repository_id1211853923
octolytics-dimension-repository_nwoTCoulth/dynamicMPNN
octolytics-dimension-repository_publictrue
octolytics-dimension-repository_is_forkfalse
octolytics-dimension-repository_network_root_id1211853923
octolytics-dimension-repository_network_root_nwoTCoulth/dynamicMPNN
turbo-body-classeslogged-out env-production page-responsive
disable-turbofalse
browser-stats-urlhttps://api.github.com/_private/browser/stats
browser-errors-urlhttps://api.github.com/_private/browser/errors
release59ad79fae8b165db9a62b2142d969fa7b21eedcf
ui-targetfull
theme-color#1e2327
color-schemelight dark

Links:

Skip to contenthttps://github.com/TCoulth/dynamicMPNN#start-of-content
https://github.com/
Sign in https://github.com/login?return_to=https%3A%2F%2Fgithub.com%2FTCoulth%2FdynamicMPNN
GitHub CopilotWrite better code with AIhttps://github.com/features/copilot
GitHub Copilot appDirect agents from issue to mergehttps://github.com/features/ai/github-app
MCP RegistryNewIntegrate external toolshttps://github.com/mcp
ActionsAutomate any workflowhttps://github.com/features/actions
CodespacesInstant dev environmentshttps://github.com/features/codespaces
IssuesPlan and track workhttps://github.com/features/issues
Code ReviewManage code changeshttps://github.com/features/code-review
GitHub Advanced SecurityFind and fix vulnerabilitieshttps://github.com/security/advanced-security
Code securitySecure your code as you buildhttps://github.com/security/advanced-security/code-security
Secret protectionStop leaks before they starthttps://github.com/security/advanced-security/secret-protection
Why GitHubhttps://github.com/why-github
Documentationhttps://docs.github.com
Bloghttps://github.blog
Changeloghttps://github.blog/changelog
Marketplacehttps://github.com/marketplace
View all featureshttps://github.com/features
Enterpriseshttps://github.com/enterprise
Small and medium teamshttps://github.com/team
Startupshttps://github.com/enterprise/startups
Nonprofitshttps://github.com/solutions/industry/nonprofits
App Modernizationhttps://github.com/solutions/use-case/app-modernization
DevSecOpshttps://github.com/solutions/use-case/devsecops
DevOpshttps://github.com/solutions/use-case/devops
CI/CDhttps://github.com/solutions/use-case/ci-cd
View all use caseshttps://github.com/solutions/use-case
Healthcarehttps://github.com/solutions/industry/healthcare
Financial serviceshttps://github.com/solutions/industry/financial-services
Manufacturinghttps://github.com/solutions/industry/manufacturing
Governmenthttps://github.com/solutions/industry/government
View all industrieshttps://github.com/solutions/industry
View all solutionshttps://github.com/solutions
AIhttps://github.com/resources/articles?topic=ai
Software Developmenthttps://github.com/resources/articles?topic=software-development
DevOpshttps://github.com/resources/articles?topic=devops
Securityhttps://github.com/resources/articles?topic=security
View all topicshttps://github.com/resources/articles
Customer storieshttps://github.com/customer-stories
Events & webinarshttps://github.com/resources/events
Ebooks & reportshttps://github.com/resources/whitepapers
Business insightshttps://github.com/solutions/executive-insights
GitHub Skillshttps://skills.github.com
Documentationhttps://docs.github.com
Customer supporthttps://support.github.com
Community forumhttps://github.com/orgs/community/discussions
Trust centerhttps://github.com/trust-center
Partnershttps://github.com/partners
View all resourceshttps://github.com/resources
GitHub SponsorsFund open source developershttps://github.com/sponsors
Security Labhttps://securitylab.github.com
Maintainer Communityhttps://maintainers.github.com
Acceleratorhttps://github.com/accelerator
GitHub Starshttps://stars.github.com
Archive Programhttps://archiveprogram.github.com
Topicshttps://github.com/topics
Trendinghttps://github.com/trending
Collectionshttps://github.com/collections
Enterprise platformAI-powered developer platformhttps://github.com/enterprise
GitHub Advanced SecurityEnterprise-grade security featureshttps://github.com/security/advanced-security
Copilot for BusinessEnterprise-grade AI featureshttps://github.com/features/copilot/copilot-business
Premium SupportEnterprise-grade 24/7 supporthttps://github.com/premium-support
Pricinghttps://github.com/pricing
Search syntax tipshttps://docs.github.com/search-github/github-code-search/understanding-github-code-search-syntax
documentationhttps://docs.github.com/search-github/github-code-search/understanding-github-code-search-syntax
Sign in https://github.com/login?return_to=https%3A%2F%2Fgithub.com%2FTCoulth%2FdynamicMPNN
Sign up https://github.com/signup?ref_cta=Sign+up&ref_loc=header+logged+out&ref_page=%2F%3Cuser-name%3E%2F%3Crepo-name%3E&source=header-repo&source_repo=TCoulth%2FdynamicMPNN
Reloadhttps://github.com/TCoulth/dynamicMPNN
Reloadhttps://github.com/TCoulth/dynamicMPNN
Reloadhttps://github.com/TCoulth/dynamicMPNN
TCoulth https://github.com/TCoulth
dynamicMPNNhttps://github.com/TCoulth/dynamicMPNN
Notifications https://github.com/login?return_to=%2FTCoulth%2FdynamicMPNN
Fork 0 https://github.com/login?return_to=%2FTCoulth%2FdynamicMPNN
Star 1 https://github.com/login?return_to=%2FTCoulth%2FdynamicMPNN
Code https://github.com/TCoulth/dynamicMPNN
Issues 0 https://github.com/TCoulth/dynamicMPNN/issues
Pull requests 0 https://github.com/TCoulth/dynamicMPNN/pulls
Actions https://github.com/TCoulth/dynamicMPNN/actions
Projects https://github.com/TCoulth/dynamicMPNN/projects
Security and quality 0 https://github.com/TCoulth/dynamicMPNN/security
Insights https://github.com/TCoulth/dynamicMPNN/pulse
Code https://github.com/TCoulth/dynamicMPNN
Issues https://github.com/TCoulth/dynamicMPNN/issues
Pull requests https://github.com/TCoulth/dynamicMPNN/pulls
Actions https://github.com/TCoulth/dynamicMPNN/actions
Projects https://github.com/TCoulth/dynamicMPNN/projects
Security and quality https://github.com/TCoulth/dynamicMPNN/security
Insights https://github.com/TCoulth/dynamicMPNN/pulse
https://github.com/TCoulth/dynamicMPNN
Brancheshttps://github.com/TCoulth/dynamicMPNN/branches
Tagshttps://github.com/TCoulth/dynamicMPNN/tags
https://github.com/TCoulth/dynamicMPNN/branches
https://github.com/TCoulth/dynamicMPNN/tags
60 Commitshttps://github.com/TCoulth/dynamicMPNN/commits/main/
https://github.com/TCoulth/dynamicMPNN/commits/main/
benchmarkhttps://github.com/TCoulth/dynamicMPNN/tree/main/benchmark
benchmarkhttps://github.com/TCoulth/dynamicMPNN/tree/main/benchmark
dynamic_constraintshttps://github.com/TCoulth/dynamicMPNN/tree/main/dynamic_constraints
dynamic_constraintshttps://github.com/TCoulth/dynamicMPNN/tree/main/dynamic_constraints
inputshttps://github.com/TCoulth/dynamicMPNN/tree/main/inputs
inputshttps://github.com/TCoulth/dynamicMPNN/tree/main/inputs
openfoldhttps://github.com/TCoulth/dynamicMPNN/tree/main/openfold
openfoldhttps://github.com/TCoulth/dynamicMPNN/tree/main/openfold
outputshttps://github.com/TCoulth/dynamicMPNN/tree/main/outputs
outputshttps://github.com/TCoulth/dynamicMPNN/tree/main/outputs
traininghttps://github.com/TCoulth/dynamicMPNN/tree/main/training
traininghttps://github.com/TCoulth/dynamicMPNN/tree/main/training
.gitignorehttps://github.com/TCoulth/dynamicMPNN/blob/main/.gitignore
.gitignorehttps://github.com/TCoulth/dynamicMPNN/blob/main/.gitignore
LICENSEhttps://github.com/TCoulth/dynamicMPNN/blob/main/LICENSE
LICENSEhttps://github.com/TCoulth/dynamicMPNN/blob/main/LICENSE
README.mdhttps://github.com/TCoulth/dynamicMPNN/blob/main/README.md
README.mdhttps://github.com/TCoulth/dynamicMPNN/blob/main/README.md
data_utils.pyhttps://github.com/TCoulth/dynamicMPNN/blob/main/data_utils.py
data_utils.pyhttps://github.com/TCoulth/dynamicMPNN/blob/main/data_utils.py
get_model_params.shhttps://github.com/TCoulth/dynamicMPNN/blob/main/get_model_params.sh
get_model_params.shhttps://github.com/TCoulth/dynamicMPNN/blob/main/get_model_params.sh
model_utils.pyhttps://github.com/TCoulth/dynamicMPNN/blob/main/model_utils.py
model_utils.pyhttps://github.com/TCoulth/dynamicMPNN/blob/main/model_utils.py
requirements.txthttps://github.com/TCoulth/dynamicMPNN/blob/main/requirements.txt
requirements.txthttps://github.com/TCoulth/dynamicMPNN/blob/main/requirements.txt
run.pyhttps://github.com/TCoulth/dynamicMPNN/blob/main/run.py
run.pyhttps://github.com/TCoulth/dynamicMPNN/blob/main/run.py
run_examples.shhttps://github.com/TCoulth/dynamicMPNN/blob/main/run_examples.sh
run_examples.shhttps://github.com/TCoulth/dynamicMPNN/blob/main/run_examples.sh
sc_examples.shhttps://github.com/TCoulth/dynamicMPNN/blob/main/sc_examples.sh
sc_examples.shhttps://github.com/TCoulth/dynamicMPNN/blob/main/sc_examples.sh
sc_utils.pyhttps://github.com/TCoulth/dynamicMPNN/blob/main/sc_utils.py
sc_utils.pyhttps://github.com/TCoulth/dynamicMPNN/blob/main/sc_utils.py
score.pyhttps://github.com/TCoulth/dynamicMPNN/blob/main/score.py
score.pyhttps://github.com/TCoulth/dynamicMPNN/blob/main/score.py
READMEhttps://github.com/TCoulth/dynamicMPNN
MIT licensehttps://github.com/TCoulth/dynamicMPNN
https://github.com/TCoulth/dynamicMPNN#dynamicmpnn
LigandMPNNhttps://www.biorxiv.org/content/10.1101/2023.12.22.573103v1
ProteinMPNNhttps://www.science.org/doi/10.1126/science.add2187
https://github.com/dauparas/LigandMPNNhttps://github.com/dauparas/LigandMPNN
herehttps://github.com/dauparas/LigandMPNN
Instructions for runninghttps://github.com/TCoulth/dynamicMPNN#how-to-use-dynamic-constraints
Target pIhttps://github.com/TCoulth/dynamicMPNN#target-pi
Benchmark resultshttps://github.com/TCoulth/dynamicMPNN#pi-results
Surface patcheshttps://github.com/TCoulth/dynamicMPNN#surface-patches
Benchmark resultshttps://github.com/TCoulth/dynamicMPNN#patches-results
Sequence motifshttps://github.com/TCoulth/dynamicMPNN#sequence-motifs
https://github.com/TCoulth/dynamicMPNN#how-to-use-dynamic-constraints
https://github.com/TCoulth/dynamicMPNN#targeting-pi
https://github.com/TCoulth/dynamicMPNN#surface-patches
https://github.com/TCoulth/dynamicMPNN#dynamic-constraint-sets
Target pIhttps://github.com/TCoulth/dynamicMPNN#target-pi
Surface charge patcheshttps://github.com/TCoulth/dynamicMPNN#surface-patches
Target sequence motifshttps://github.com/TCoulth/dynamicMPNN#sequence-motifs
https://github.com/TCoulth/dynamicMPNN#target-pi
https://github.com/TCoulth/dynamicMPNN#pi-benchmark-setup
https://github.com/TCoulth/dynamicMPNN#pi-results
https://private-user-images.githubusercontent.com/21342963/581018331-72bebc21-e7dc-4995-8391-6f48bc49ab06.png?jwt=eyJ0eXAiOiJKV1QiLCJhbGciOiJIUzI1NiJ9.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.47MfqwlmAJAF6ghzAhTG-ji7BN0jQwoefCjSbedMWv0
https://private-user-images.githubusercontent.com/21342963/581018470-6074d7a0-d489-4b43-9412-ba3e18b7d602.png?jwt=eyJ0eXAiOiJKV1QiLCJhbGciOiJIUzI1NiJ9.eyJpc3MiOiJnaXRodWIuY29tIiwiYXVkIjoicmF3LmdpdGh1YnVzZXJjb250ZW50LmNvbSIsImtleSI6ImtleTUiLCJleHAiOjE3ODMzNDEzMzAsIm5iZiI6MTc4MzM0MTAzMCwicGF0aCI6Ii8yMTM0Mjk2My81ODEwMTg0NzAtNjA3NGQ3YTAtZDQ4OS00YjQzLTk0MTItYmEzZTE4YjdkNjAyLnBuZz9YLUFtei1BbGdvcml0aG09QVdTNC1ITUFDLVNIQTI1NiZYLUFtei1DcmVkZW50aWFsPUFLSUFWQ09EWUxTQTUzUFFLNFpBJTJGMjAyNjA3MDYlMkZ1cy1lYXN0LTElMkZzMyUyRmF3czRfcmVxdWVzdCZYLUFtei1EYXRlPTIwMjYwNzA2VDEyMzAzMFomWC1BbXotRXhwaXJlcz0zMDAmWC1BbXotU2lnbmF0dXJlPWFmOTIyYmM5NTk2NjE1OGJiNzBjMjNkODg4OTQ5M2YxMmQwNWM2MjljYmI0OTU0YzgyMjg0OGEzNTYxZWM3NWImWC1BbXotU2lnbmVkSGVhZGVycz1ob3N0JnJlc3BvbnNlLWNvbnRlbnQtdHlwZT1pbWFnZSUyRnBuZyJ9.s_oi6cxGpgZLG0MS7zUpmiD2I8xGLoQAXXhzdf5nzRE
https://private-user-images.githubusercontent.com/21342963/581020345-14051028-d791-44cb-be8c-a05f36c4da70.png?jwt=eyJ0eXAiOiJKV1QiLCJhbGciOiJIUzI1NiJ9.eyJpc3MiOiJnaXRodWIuY29tIiwiYXVkIjoicmF3LmdpdGh1YnVzZXJjb250ZW50LmNvbSIsImtleSI6ImtleTUiLCJleHAiOjE3ODMzNDEzMzAsIm5iZiI6MTc4MzM0MTAzMCwicGF0aCI6Ii8yMTM0Mjk2My81ODEwMjAzNDUtMTQwNTEwMjgtZDc5MS00NGNiLWJlOGMtYTA1ZjM2YzRkYTcwLnBuZz9YLUFtei1BbGdvcml0aG09QVdTNC1ITUFDLVNIQTI1NiZYLUFtei1DcmVkZW50aWFsPUFLSUFWQ09EWUxTQTUzUFFLNFpBJTJGMjAyNjA3MDYlMkZ1cy1lYXN0LTElMkZzMyUyRmF3czRfcmVxdWVzdCZYLUFtei1EYXRlPTIwMjYwNzA2VDEyMzAzMFomWC1BbXotRXhwaXJlcz0zMDAmWC1BbXotU2lnbmF0dXJlPTJiNzc5ZDcxMmFlOThjZThmODRjYTIxOWY2ZGM1MDAzYTg4YmUzZjVlOGViZDAxNWZmN2UxOTE2MTI3NDQ2YzEmWC1BbXotU2lnbmVkSGVhZGVycz1ob3N0JnJlc3BvbnNlLWNvbnRlbnQtdHlwZT1pbWFnZSUyRnBuZyJ9.UqVaGaIffYL3EP94QK1Mqctxu2teRbFjxbspJNaaTbc
https://private-user-images.githubusercontent.com/21342963/581020396-4dd0bc5c-d207-48fa-b4a7-6c7b9e783ffa.png?jwt=eyJ0eXAiOiJKV1QiLCJhbGciOiJIUzI1NiJ9.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.Ja_02T5o_eu1t5os4j74sWLmsAC-VhEn7zq5Q0XEVbg
https://github.com/TCoulth/dynamicMPNN#surface-patches-1
https://github.com/TCoulth/dynamicMPNN#patches-benchmark-setup
PEP-patchhttps://github.com/liedllab/surface_analyses
https://github.com/TCoulth/dynamicMPNN#patches-results
https://github.com/TCoulth/dynamicMPNN#negative-patches
https://private-user-images.githubusercontent.com/21342963/581612256-01074bce-1ee1-4d18-9011-8d098022761c.PNG?jwt=eyJ0eXAiOiJKV1QiLCJhbGciOiJIUzI1NiJ9.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.AIkUck3DjNZfQoOxoRE3XzHQdyqY4qitPsjUPqGrBns
https://private-user-images.githubusercontent.com/21342963/581722628-c5c56b1b-f85b-46a0-98a6-fc2a5f1fe976.PNG?jwt=eyJ0eXAiOiJKV1QiLCJhbGciOiJIUzI1NiJ9.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.az2mzZ2Gnz-Qd7lcnnoZVsPANFepFK3mLjhgtqQubsk
https://github.com/TCoulth/dynamicMPNN#positive-patches
https://private-user-images.githubusercontent.com/21342963/582076224-b6a62546-5124-42c5-84c6-0ff15f873cc1.PNG?jwt=eyJ0eXAiOiJKV1QiLCJhbGciOiJIUzI1NiJ9.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.kiQU997hDzxkAvmbvfsmBH2gMS6uWovzRpjl9hyBmZ8
https://private-user-images.githubusercontent.com/21342963/582076324-12716e0c-1eb1-4164-aa60-e7127dc12e57.PNG?jwt=eyJ0eXAiOiJKV1QiLCJhbGciOiJIUzI1NiJ9.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.SeM0k4UVbojaRPgpjmMQOXV3bfrgS7q2lBYLmLLsNHE
https://github.com/TCoulth/dynamicMPNN#hydrophobic-patches
https://private-user-images.githubusercontent.com/21342963/581619221-eb070b47-5c3b-41e7-8d72-4d466955a5e3.PNG?jwt=eyJ0eXAiOiJKV1QiLCJhbGciOiJIUzI1NiJ9.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.bdjOESN_yhw8Ri3zCD4V4141Zr2cdG1uidMJHJ6NZ2w
https://github.com/TCoulth/dynamicMPNN#selected-af2-patch-comparisons
https://private-user-images.githubusercontent.com/21342963/582162052-15e33040-9743-49fc-98f8-1d94126e32e9.png?jwt=eyJ0eXAiOiJKV1QiLCJhbGciOiJIUzI1NiJ9.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.QRY_iUlDcG_2pdmMUSD-_0V0h6dVvkLtaq3o2Nx_xg4
https://github.com/TCoulth/dynamicMPNN#sequence-motifs
https://github.com/TCoulth/dynamicMPNN#citing-this-work
https://github.com/TCoulth/dynamicMPNN#claude-code-disclosure
protein-structure https://github.com/topics/protein-structure
protein https://github.com/topics/protein
protein-design https://github.com/topics/protein-design
inverse-folding https://github.com/topics/inverse-folding
protein-engineering https://github.com/topics/protein-engineering
proteinmpnn https://github.com/topics/proteinmpnn
protein-electrostatics https://github.com/topics/protein-electrostatics
Readme https://github.com/TCoulth/dynamicMPNN#readme-ov-file
MIT license https://github.com/TCoulth/dynamicMPNN#MIT-1-ov-file
Please reload this pagehttps://github.com/TCoulth/dynamicMPNN
Activityhttps://github.com/TCoulth/dynamicMPNN/activity
0 forkshttps://github.com/TCoulth/dynamicMPNN/forks
Report repository https://github.com/contact/report-content?content_url=https%3A%2F%2Fgithub.com%2FTCoulth%2FdynamicMPNN&report=TCoulth+%28user%29
Releaseshttps://github.com/TCoulth/dynamicMPNN/releases
Packages 0https://github.com/users/TCoulth/packages?repo_name=dynamicMPNN
Please reload this pagehttps://github.com/TCoulth/dynamicMPNN
Contributorshttps://github.com/TCoulth/dynamicMPNN/graphs/contributors
Please reload this pagehttps://github.com/TCoulth/dynamicMPNN
Python 97.9% https://github.com/TCoulth/dynamicMPNN/search?l=python
Shell 2.1% https://github.com/TCoulth/dynamicMPNN/search?l=shell
https://github.com
Termshttps://docs.github.com/site-policy/github-terms/github-terms-of-service
Privacyhttps://docs.github.com/site-policy/privacy-policies/github-privacy-statement
Securityhttps://github.com/security
Statushttps://www.githubstatus.com/
Communityhttps://github.community/
Docshttps://docs.github.com/
Contacthttps://support.github.com?tags=dotcom-footer

Viewport: width=device-width

URLs of crawlers that visited me.